Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g027937.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-23 112.1 54 100.0
Sopen11g010000 Solanum pennellii HOM05D000613 ORTHO05D000446 7.2e-17 89.7 54 87.0
Solyc11g018855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.1e-16 88.2 54 85.2
Solyc11g150108.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.1e-16 88.2 54 85.2
Solyc11g150109.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.1e-16 88.2 54 85.2
Sopen00g005920 Solanum pennellii HOM05D000613 ORTHO05D000446 2.1e-16 88.2 54 85.2
Sopen11g023910 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-16 88.2 54 85.2
Sopen11g023930 Solanum pennellii HOM05D000613 ORTHO05D000446 2.1e-16 88.2 54 85.2
Sopen11g009990 Solanum pennellii HOM05D000613 ORTHO05D000446 1.4e-15 85.5 54 83.3
Sopen11g023700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-15 85.5 54 83.3
Sopen11g023710 Solanum pennellii HOM05D000613 ORTHO05D000002 1.4e-15 85.5 54 81.5
PGSC0003DMG400042932 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.4e-15 85.5 54 79.6
Solyc11g061855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.0e-15 84.3 54 81.5
Solyc11g020507.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.8e-15 83.2 54 79.6
PGSC0003DMG400035440 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-14 82.0 54 77.8
PGSC0003DMG400037891 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-14 81.6 54 77.8
PGSC0003DMG400034585 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-14 81.3 54 75.9
PGSC0003DMG400037106 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-14 81.3 54 77.8
PGSC0003DMG400038341 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-14 81.3 54 77.8
PGSC0003DMG400040479 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.4e-14 80.9 54 75.9
PGSC0003DMG400038521 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.7e-14 80.1 54 75.9
PGSC0003DMG400039977 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.5e-14 79.7 54 74.1
PGSC0003DMG400036656 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.7e-13 78.6 54 74.1
PGSC0003DMG400042401 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.8e-13 77.8 52 75.0
PGSC0003DMG400038422 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.9e-13 77.0 54 74.1
Solyc11g061890.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.3e-13 76.6 59 72.9
PGSC0003DMG400035908 Solanum tuberosum HOM05D007862 ORTHO05D000446 6.3e-13 76.6 54 74.1
PGSC0003DMG400044956 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.3e-13 76.6 54 74.1
PGSC0003DMG400045976 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.8e-12 75.1 54 74.1
PGSC0003DMG400046752 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.2e-12 74.3 54 72.2
PGSC0003DMG400035835 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.1e-12 73.9 54 72.2
PGSC0003DMG400044260 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.4e-12 73.6 54 70.4
Solyc11g020433.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.5e-11 70.5 59 67.8
PGSC0003DMG400044453 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.9e-10 67.4 54 68.5
PGSC0003DMG400042147 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-09 65.5 42 81.0
Solyc11g061817.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-08 62.4 40 75.0
PGSC0003DMG400047106 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.6e-08 62.0 39 79.5
PGSC0003DMG400043062 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-08 61.6 47 66.0
Solyc08g061695.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.0e-07 59.3 36 83.3
PGSC0003DMG400034593 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-07 59.3 55 61.8
vmacro19439 Vaccinium macrocarpon HOM05D000613 ORTHO05D000446 1.0e-07 59.3 53 52.8
Peaxi162Scf00016g00911 Petunia axillaris HOM05D000613 ORTHO05D000446 1.8e-07 58.5 53 56.6
Peaxi162Scf00016g00945 Petunia axillaris HOM05D000613 ORTHO05D000446 1.8e-07 58.5 53 56.6
PGSC0003DMG400043528 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.8e-07 58.5 39 74.4
Solyc11g150118.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.0e-07 57.4 40 72.5
Duzib268G0072 Durio zibethinus HOM05D000613 ORTHO05D000446 6.8e-07 56.6 53 49.1
Hma1.2p1_1037F.1_g250640 Hydrangea macrophylla HOM05D000613 ORTHO05D000446 8.9e-07 56.2 53 49.1
Peaxi162Scf00209g00126 Petunia axillaris HOM05D000613 ORTHO05D000446 8.9e-07 56.2 53 54.7
PGSC0003DMG400038470 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.9e-07 56.2 39 71.8
HPP92_027824 Vanilla planifolia HOM05D000613 ORTHO05D000446 1.2e-06 55.8 53 54.7
PGSC0003DMG400046352 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-06 55.5 39 74.4
Eucgr.G00473 Eucalyptus grandis HOM05D000613 ORTHO05D000446 2.6e-06 54.7 53 50.9
Eucgr.G01887 Eucalyptus grandis HOM05D000613 ORTHO05D000446 2.6e-06 54.7 53 50.9
CAN.G869.14 Capsicum annuum HOM05D000613 ORTHO05D000446 3.4e-06 54.3 54 55.6
AUR62030078 Chenopodium quinoa HOM05D000613 ORTHO05D000446 3.4e-06 54.3 53 52.8
AUR62038224 Chenopodium quinoa HOM05D000613 ORTHO05D000446 3.4e-06 54.3 53 52.8
Dinv42090 Davidia involucrata HOM05D000613 ORTHO05D000446 3.4e-06 54.3 54 53.7
FAN16G0170 Fragaria x ananassa HOM05D000613 ORTHO05D000446 3.4e-06 54.3 51 47.1
FAN25G2504 Fragaria x ananassa HOM05D000613 ORTHO05D000446 3.4e-06 54.3 51 47.1
FvH4_2g23840 Fragaria vesca HOM05D000613 ORTHO05D000446 4.4e-06 53.9 54 51.9
FAN24G0285 Fragaria x ananassa HOM05D000613 ORTHO05D000446 4.4e-06 53.9 54 51.9
MBI17_g12010_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 5.8e-06 53.5 53 50.9
PGSC0003DMG400043272 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.8e-06 53.5 100 39.0
Aqoxy4G00843 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 7.5e-06 53.1 53 50.9
CSS0048745 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 9.8e-06 52.8 53 47.2
CDE05G1315 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 9.8e-06 52.8 53 49.1
CDE05G3426 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 9.8e-06 52.8 53 49.1
Migut.D02360 Erythranthe guttata HOM05D000613 ORTHO05D000446 9.8e-06 52.8 50 48.0
RcHm_v2.0_Chr5g0055011 Rosa chinensis HOM05D000613 ORTHO05D000446 9.8e-06 52.8 49 49.0
PGSC0003DMG400043341 Solanum tuberosum HOM05D000613 ORTHO05D000446 9.8e-06 52.8 44 68.2


User provided reference genes

Program Settings