Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g027830.2 Solanum lycopersicum HOM05D003774 ORTHO05D010174 8.5e-160 567.0 298 100.0
Sopen11g022590 Solanum pennellii HOM05D003774 ORTHO05D010174 7.2e-151 537.3 302 95.4
PGSC0003DMG400026729 Solanum tuberosum HOM05D003774 ORTHO05D010174 4.9e-147 524.6 298 94.3
Nitab4.5_0005616g0030 Nicotiana tabacum HOM05D003774 ORTHO05D010174 1.0e-128 463.8 309 82.2
CAN.G1483.1 Capsicum annuum HOM05D003774 ORTHO05D010174 6.6e-128 461.1 307 82.7
Nitab4.5_0001463g0060 Nicotiana tabacum HOM05D003774 ORTHO05D010174 2.3e-125 452.6 306 82.0
Peaxi162Scf00688g00424 Petunia axillaris HOM05D003774 ORTHO05D010174 2.5e-119 432.6 308 78.2
Lsat_1_v5_gn_1_25800 Lactuca sativa HOM05D003774 ORTHO05D010174 2.1e-94 349.7 257 68.5
RcHm_v2.0_Chr7g0227131 Rosa chinensis HOM05D003774 ORTHO05D010174 3.2e-90 335.9 265 67.2
Cfa012970 Carpinus fangiana HOM05D003774 ORTHO05D010174 5.5e-90 335.1 259 66.4
FvH4_5g31600 Fragaria vesca HOM05D003774 ORTHO05D010174 9.3e-90 334.3 287 63.4
MD14G1036300 Malus domestica HOM05D003774 ORTHO05D010174 9.3e-90 334.3 267 67.4
FAN08G2588 Fragaria x ananassa HOM05D003774 ORTHO05D010174 1.2e-89 334.0 287 62.7
CiPaw.07G235600 Carya illinoinensis HOM05D003774 ORTHO05D010174 2.1e-89 333.2 279 60.9
CANSAT25G1591 Cannabis sativa HOM05D003774 ORTHO05D010174 2.7e-89 332.8 257 65.8
Migut.C01324 Erythranthe guttata HOM05D003774 ORTHO05D010174 6.0e-89 331.6 299 62.2
HanXRQChr02g0036571 Helianthus annuus HOM05D003774 ORTHO05D010174 1.0e-88 330.9 259 66.0
PGR042G3332 Punica granatum HOM05D003774 ORTHO05D010174 1.0e-88 330.9 255 67.5
FAN07G1602 Fragaria x ananassa HOM05D003774 ORTHO05D010174 8.7e-88 327.8 287 62.0
Prupe.1G555700 Prunus persica HOM05D003774 ORTHO05D010174 1.5e-87 327.0 264 65.5
Eucgr.F02989 Eucalyptus grandis HOM05D003774 ORTHO05D010174 1.9e-87 326.6 255 68.2
Cc00_g20990 Coffea canephora HOM05D003774 ORTHO05D010174 5.7e-87 325.1 277 64.3
Manes.18G106000 Manihot esculenta HOM05D003774 ORTHO05D010174 9.6e-87 324.3 246 66.3
Thecc.08G192700 Theobroma cacao HOM05D003774 ORTHO05D010174 3.7e-86 322.4 257 66.5
DCAR_017444 Daucus carota HOM05D003774 ORTHO05D010174 2.4e-85 319.7 241 67.6
TWI14G1031 Tripterygium wilfordii HOM05D003774 ORTHO05D010174 1.5e-84 317.0 230 70.4
Actinidia29409 Actinidia chinensis HOM05D003774 ORTHO05D010174 1.0e-83 314.3 256 64.8
Sp1g30100 Schrenkiella parvula HOM05D003774 ORTHO05D010174 2.2e-83 313.2 257 62.6
AL1G50100 Arabidopsis lyrata HOM05D003774 ORTHO05D010174 4.2e-82 308.9 257 61.9
A09p31890 Brassica napus HOM05D003774 ORTHO05D010174 5.5e-82 308.5 257 61.5
BcaC08g43723 Brassica carinata HOM05D003774 ORTHO05D010174 9.3e-82 307.8 257 61.5
BolC6t36225H Brassica oleracea HOM05D003774 ORTHO05D010174 9.3e-82 307.8 257 61.5
BraA09t38729Z Brassica rapa HOM05D003774 ORTHO05D010174 1.2e-81 307.4 257 61.5
Sabra13G0091200 Salix brachista HOM05D003774 ORTHO05D009174 1.2e-81 307.4 269 61.3
C06p11060 Brassica napus HOM05D003774 ORTHO05D010174 1.6e-81 307.0 257 61.5
Ciclev10003535m.g Citrus clementina HOM05D003774 ORTHO05D010174 4.6e-81 305.4 246 63.8
Atru.chr13.2372 Acer truncatum HOM05D003774 ORTHO05D010174 1.0e-80 304.3 258 61.2
Thhalv10001819m.g Eutrema salsugineum HOM05D003774 ORTHO05D010174 1.0e-80 304.3 257 62.3
BcaB07g33098 Brassica carinata HOM05D003774 ORTHO05D010174 3.9e-80 302.4 294 57.1
THA.LOC104816539 Tarenaya hassleriana HOM05D003774 ORTHO05D010174 1.1e-79 300.8 255 62.0
Carub.0347s0001 Capsella rubella HOM05D003774 ORTHO05D010174 1.5e-79 300.4 259 61.4
PSO782G0406 Papaver somniferum HOM05D003774 ORTHO05D010174 4.3e-79 298.9 264 61.4
CsaV3_5G040540 Cucumis sativus L. HOM05D003774 ORTHO05D010174 1.3e-78 297.4 258 60.1
PSO170G3079 Papaver somniferum HOM05D003774 ORTHO05D010174 1.3e-78 297.4 293 57.3
Haze_21314 Corylus avellana HOM05D003774 ORTHO05D010174 4.8e-78 295.4 262 61.5
MBI03_g45112_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 2.4e-77 293.1 286 59.1
GSVIVG01026088001 Vitis vinifera HOM05D003774 ORTHO05D010174 5.0e-75 285.4 220 65.5
FAN18G3876 Fragaria x ananassa HOM05D003402 ORTHO05D003939 2.7e-73 279.6 288 55.9
ECA247G3883 Erigeron canadensis HOM05D003774 ORTHO05D009174 1.0e-72 277.7 209 66.0
Oeu013897.1 Olea europaea HOM05D003774 ORTHO05D010174 1.4e-69 267.3 208 66.8
ClCG08G000190 Citrullus lanatus HOM05D003774 ORTHO05D010174 1.8e-69 266.9 286 53.1
MD04G1056900 Malus domestica HOM05D003774 ORTHO05D010174 1.8e-69 266.9 206 67.0
MBI03_g46804_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 2.2e-67 260.0 248 59.7
Cpa.g.sc66.3 Carica papaya HOM05D003774 ORTHO05D010174 3.8e-67 259.2 204 65.7
Potri.013G105500 Populus trichocarpa HOM05D003774 ORTHO05D010174 1.1e-66 257.7 204 64.7
AT1G35340 Arabidopsis thaliana HOM05D003774 ORTHO05D010174 5.2e-64 248.8 208 60.1
COL.COLO4_24648 Corchorus olitorius HOM05D003774 ORTHO05D010174 8.8e-64 248.1 230 58.3
Aa31LG6G8720 Aethionema arabicum HOM05D003774 ORTHO05D009174 3.5e-60 236.1 224 57.1
Zm00001eb169160 Zea mays HOM05D003774 ORTHO05D010174 1.0e-59 234.6 257 51.0
SEGI_18058 Sequoiadendron giganteum HOM05D003774 ORTHO05D010174 1.7e-59 233.8 241 52.7
Dinv41759 Davidia involucrata HOM05D003774 ORTHO05D010174 2.8e-54 216.5 147 74.1
Pp3c18_9200 Physcomitrium patens HOM05D003774 ORTHO05D010174 1.4e-48 197.6 245 44.1
Mapoly0085s0045 Marchantia polymorpha HOM05D003774 ORTHO05D010174 3.5e-44 183.0 260 40.0
MELO3C022227.2 Cucumis melo HOM05D003774 ORTHO05D010174 1.1e-42 177.9 258 42.6
Rhsim11G0052800 Rhododendron simsii HOM05D003774 ORTHO05D000166 2.2e-38 163.7 144 66.7
CARHR034170 Cardamine hirsuta HOM05D003774 ORTHO05D010174 1.9e-34 150.6 147 59.2
TAR628G1250 Trochodendron aralioides HOM05D003774 ORTHO05D010174 7.3e-34 148.7 112 70.5
Lj7A284G37 Lonicera japonica HOM05D003774 ORTHO05D010174 4.4e-31 139.4 90 75.6
MSTRG.1569 Avicennia marina HOM05D003774 ORTHO05D010174 9.8e-31 138.3 125 61.6
AagrBONN_evm.TU.Sc2ySwM_340.403 Anthoceros agrestis HOM05D000737 ORTHO05D000581 4.3e-26 122.9 232 34.1
FvH4_5g26640 Fragaria vesca HOM05D003774 ORTHO05D010174 5.6e-26 122.5 131 56.5
Lj7A284T38 Lonicera japonica HOM05D003774 ORTHO05D010174 7.5e-23 112.1 101 59.4
Os11g0219000 Oryza sativa ssp. japonica HOM05D003774 ORTHO05D010174 2.8e-17 93.6 110 50.9
CAN.G271.1 Capsicum annuum HOM05D003774 ORTHO05D010174 2.3e-16 90.5 129 45.0
MD15G1405700 Malus domestica HOM05D003774 ORTHO05D010174 1.9e-13 80.9 148 35.8
Cre16.g670500 Chlamydomonas reinhardtii HOM05D003774 ORTHO05D010174 2.5e-10 70.5 334 23.7
MCO03G373 Micromonas commoda HOM05D003774 ORTHO05D010174 3.3e-10 70.1 113 34.5
MBI03_g48045_MAGBIO Magnolia biondii HOM05D003774 ORTHO05D010174 8.4e-06 55.5 50 58.0


User provided reference genes

Program Settings