Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g022480.1 Solanum lycopersicum HOM05D007636 ORTHO05D003796 2.2e-72 275.4 129 100.0
Sopen11g011520 Solanum pennellii HOM05D007636 ORTHO05D003796 5.7e-68 260.8 128 95.3
Sopen11g011600 Solanum pennellii HOM05D007636 ORTHO05D003796 1.4e-29 133.3 126 54.0
PGSC0003DMG400043518 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.3e-29 132.5 68 89.7
CAN.G358.103 Capsicum annuum HOM05D007636 ORTHO05D003796 5.2e-29 131.3 140 50.0
CAN.G895.29 Capsicum annuum HOM05D007636 ORTHO05D003796 1.4e-26 123.2 136 51.5
Nitab4.5_0002723g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.4e-26 123.2 144 45.8
Nitab4.5_0000016g0600 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.8e-25 117.5 145 44.1
Nitab4.5_0008734g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.0e-24 117.1 145 44.1
Nitab4.5_0012115g0020 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.7e-24 116.3 142 44.4
Nitab4.5_0014265g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.9e-24 115.5 145 44.1
Nitab4.5_0000016g0520 Nicotiana tabacum HOM05D007636 ORTHO05D003796 6.6e-24 114.4 128 46.1
Nitab4.5_0001463g0090 Nicotiana tabacum HOM05D007636 ORTHO05D003796 6.6e-24 114.4 142 43.7
CAN.G895.31 Capsicum annuum HOM05D007636 ORTHO05D003796 1.5e-23 113.2 135 45.9
Nitab4.5_0004323g0060 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.9e-23 112.8 145 44.1
Nitab4.5_0007033g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.8e-22 109.0 145 42.1
Nitab4.5_0001463g0100 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.6e-22 108.6 136 44.9
Peaxi162Scf00811g00013 Petunia axillaris HOM05D007636 ORTHO05D003796 6.1e-22 107.8 145 42.1
Peaxi162Scf00811g00023 Petunia axillaris HOM05D007636 ORTHO05D003796 6.1e-22 107.8 145 42.1
Peaxi162Scf02167g00001 Petunia axillaris HOM05D007636 ORTHO05D003796 6.1e-22 107.8 145 42.1
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 1.2e-20 103.6 136 43.4
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 1.5e-20 103.2 136 43.4
PGSC0003DMG400025062 Solanum tuberosum HOM05D007636 ORTHO05D003796 5.7e-20 101.3 140 40.7
Nitab4.5_0008055g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.7e-19 99.8 136 41.9
Sopen04g028210 Solanum pennellii HOM05D007636 ORTHO05D003796 1.7e-19 99.8 139 41.0
CAN.G1453.7 Capsicum annuum HOM05D007636 ORTHO05D003796 2.2e-19 99.4 88 56.8
PGSC0003DMG400025061 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.2e-19 99.4 139 38.8
PGSC0003DMG400031146 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.9e-19 99.0 139 41.0
Peaxi162Scf00688g00041 Petunia axillaris HOM05D007636 ORTHO05D003796 6.4e-19 97.8 143 39.9
Peaxi162Scf00688g00314 Petunia axillaris HOM05D007636 ORTHO05D003796 6.4e-19 97.8 143 39.9
Peaxi162Scf68101g00002 Petunia axillaris HOM05D007636 ORTHO05D003796 6.4e-19 97.8 143 39.9
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 6.4e-19 97.8 141 40.4
PGSC0003DMG400031147 Solanum tuberosum HOM05D007636 ORTHO05D003796 6.4e-19 97.8 139 42.4
PGSC0003DMG400025060 Solanum tuberosum HOM05D007636 ORTHO05D003796 8.3e-19 97.4 139 41.0
Nitab4.5_0004233g0050 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.1e-18 97.1 126 42.1
CAN.G1453.2 Capsicum annuum HOM05D007636 ORTHO05D003796 1.4e-18 96.7 133 42.9
Nitab4.5_0011488g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.2e-18 95.5 122 43.4
Solyc01g021730.2 Solanum lycopersicum HOM05D007636 ORTHO05D003796 3.2e-18 95.5 138 39.1
Sopen01g016580 Solanum pennellii HOM05D007636 ORTHO05D003796 3.2e-18 95.5 138 39.1
Nitab4.5_0000016g0620 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.0e-17 92.8 122 44.3
Nitab4.5_0006771g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.8e-17 90.9 126 42.9
CAN.G1574.1 Capsicum annuum HOM05D007636 ORTHO05D003796 3.9e-16 88.6 115 45.2
CAN.G1453.5 Capsicum annuum HOM05D007636 ORTHO05D003796 2.5e-15 85.9 112 46.4
Nitab4.5_0005616g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.8e-14 82.4 79 51.9
CAN.G298.56 Capsicum annuum HOM05D007636 ORTHO05D017739 6.2e-14 81.3 152 36.8
CAN.G308.28 Capsicum annuum HOM05D007636 ORTHO05D017739 2.6e-12 75.9 155 36.8
PGSC0003DMG400035123 Solanum tuberosum HOM05D007636 ORTHO05D003796 9.8e-12 73.9 122 39.3
CAN.G1574.3 Capsicum annuum HOM05D007636 ORTHO05D003796 3.7e-11 72.0 135 37.0
Peaxi162Scf00269g00151 Petunia axillaris HOM05D007636 ORTHO05D003796 3.7e-11 72.0 142 35.9
Solyc08g028850.1 Solanum lycopersicum HOM05D007636 ORTHO05D003796 4.9e-11 71.6 98 37.8
Nitab4.5_0000016g0480 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.4e-10 70.1 123 36.6
Nitab4.5_0001463g0110 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.2e-10 68.9 53 56.6
Sopen06g022850 Solanum pennellii HOM05D007636 ORTHO05D017739 5.4e-10 68.2 138 37.0
Solyc06g063380.1 Solanum lycopersicum HOM05D007636 ORTHO05D017739 1.2e-09 67.0 138 36.2
Nitab4.5_0009572g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.3e-08 62.8 112 38.4
Nitab4.5_0001463g0070 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.1e-07 60.5 134 30.6
SGA_v2.0_scaffold18G08354 Striga asiatica HOM05D007636 ORTHO05D003796 9.5e-07 57.4 147 27.2


User provided reference genes

Program Settings