Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021365.2 Solanum lycopersicum HOM05D007955 ORTHO05D010034 1.7e-60 235.7 112 100.0
Sopen11g011230 Solanum pennellii HOM05D007955 ORTHO05D010034 1.6e-58 229.2 112 97.3
PGSC0003DMG400009285 Solanum tuberosum HOM05D007955 ORTHO05D010034 6.3e-47 190.7 112 83.9
Nitab4.5_0002013g0010 Nicotiana tabacum HOM05D007955 ORTHO05D010034 9.3e-43 176.8 123 73.2
Nitab4.5_0003211g0020 Nicotiana tabacum HOM05D007955 ORTHO05D010034 3.0e-41 171.8 122 68.9
arahy.Tifrunner.gnm1.ann1.6E9FUG Arachis hypogaea HOM05D007955 ORTHO05D010034 2.7e-34 148.7 113 69.0
Sp1g20140 Schrenkiella parvula HOM05D007955 ORTHO05D010034 2.7e-34 148.7 101 73.3
arahy.Tifrunner.gnm1.ann1.T5U9L2 Arachis hypogaea HOM05D007955 ORTHO05D010034 3.6e-34 148.3 113 68.1
TWI14G1427 Tripterygium wilfordii HOM05D007955 ORTHO05D010034 3.6e-34 148.3 108 64.8
Sc23g0001440 Simmondsia chinensis HOM05D007955 ORTHO05D010034 4.7e-34 147.9 104 67.3
Hund16783 Selenicereus undatus HOM05D007955 ORTHO05D010034 6.1e-34 147.5 80 81.2
Dinv41742 Davidia involucrata HOM05D007955 ORTHO05D010034 1.0e-33 146.7 117 64.1
Peaxi162Scf00391g00733 Petunia axillaris HOM05D007955 ORTHO05D010034 1.0e-33 146.7 123 64.2
Potri.013G108100 Populus trichocarpa HOM05D007955 ORTHO05D010034 1.8e-33 146.0 90 75.6
PGR042G1239 Punica granatum HOM05D007955 ORTHO05D010034 2.3e-33 145.6 77 85.7
AT1G22630 Arabidopsis thaliana HOM05D007955 ORTHO05D010034 3.0e-33 145.2 113 64.6
CANSAT25G1976 Cannabis sativa HOM05D007955 ORTHO05D010034 3.0e-33 145.2 102 71.6
QL02p025993 Quercus lobata HOM05D007955 ORTHO05D010034 3.9e-33 144.8 128 60.2
AL1G36160 Arabidopsis lyrata HOM05D007955 ORTHO05D010034 5.1e-33 144.4 113 64.6
RcHm_v2.0_Chr7g0228151 Rosa chinensis HOM05D007955 ORTHO05D010034 5.1e-33 144.4 97 72.2
Eucgr.F03002 Eucalyptus grandis HOM05D007955 ORTHO05D010034 6.7e-33 144.1 98 69.4
HanXRQChr02g0044251 Helianthus annuus HOM05D007955 ORTHO05D010034 1.1e-32 143.3 88 75.0
Hma1.2p1_0004F.1_g003980 Hydrangea macrophylla HOM05D007955 ORTHO05D010034 1.5e-32 142.9 77 83.1
MD15G1408300 Malus domestica HOM05D007955 ORTHO05D010034 1.5e-32 142.9 82 78.0
BcaC07g39172 Brassica carinata HOM05D007955 ORTHO05D010034 2.6e-32 142.1 81 80.2
THA.LOC104809734 Tarenaya hassleriana HOM05D007955 ORTHO05D010034 2.6e-32 142.1 91 72.5
CARHR023000 Cardamine hirsuta HOM05D007955 ORTHO05D010034 3.3e-32 141.7 116 64.7
Thhalv10009125m.g Eutrema salsugineum HOM05D007955 ORTHO05D010034 3.3e-32 141.7 122 60.7
CSS0011086 Camellia sinensis var. sinensis HOM05D007955 ORTHO05D010034 4.4e-32 141.4 76 82.9
Carub.0001s2214 Capsella rubella HOM05D007955 ORTHO05D010034 7.4e-32 140.6 113 63.7
FvH4_5g32101 Fragaria vesca HOM05D007955 ORTHO05D010034 7.4e-32 140.6 95 72.6
Manes.18G103900 Manihot esculenta HOM05D007955 ORTHO05D010034 7.4e-32 140.6 82 80.5
EL10Ac1g00118 Beta vulgaris HOM05D007955 ORTHO05D010034 9.7e-32 140.2 79 83.5
Aa31LG7G6520 Aethionema arabicum HOM05D007955 ORTHO05D010034 1.3e-31 139.8 101 67.3
Duzib177G0365 Durio zibethinus HOM05D007955 ORTHO05D010034 1.7e-31 139.4 86 75.6
Gohir.A05G273100 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.7e-31 139.4 109 67.9
Gohir.D05G275500 Gossypium hirsutum HOM05D007955 ORTHO05D010034 1.7e-31 139.4 109 67.9
Gorai.009G288600 Gossypium raimondii HOM05D007955 ORTHO05D010034 1.7e-31 139.4 109 67.9
ECA247G2775 Erigeron canadensis HOM05D001035 ORTHO05D001045 2.2e-31 139.0 88 72.7
Lsat_1_v5_gn_1_12280 Lactuca sativa HOM05D007955 ORTHO05D010034 2.2e-31 139.0 95 67.4
BolC8t49802H Brassica oleracea HOM05D007955 ORTHO05D010034 2.8e-31 138.7 81 77.8
Thecc.08G188200 Theobroma cacao HOM05D007955 ORTHO05D010034 3.7e-31 138.3 82 80.5
DCAR_001459 Daucus carota HOM05D007955 ORTHO05D010034 1.1e-30 136.7 83 75.9
Rhsim06G0114600 Rhododendron simsii HOM05D007955 ORTHO05D010034 1.8e-30 136.0 129 55.0
Glyma.08G239000 Glycine max HOM05D007955 ORTHO05D010034 6.9e-30 134.0 113 60.2
CDE05G3389 Ceratophyllum demersum HOM05D007955 ORTHO05D010034 2.6e-29 132.1 102 62.7
MBI03_g18672_MAGBIO Magnolia biondii HOM05D007955 ORTHO05D010034 2.6e-29 132.1 86 70.9
ClCG00G002970 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.4e-29 131.7 81 75.3
ClCG09G017850 Citrullus lanatus HOM05D007955 ORTHO05D010034 3.4e-29 131.7 81 75.3
MELO3C021951.2 Cucumis melo HOM05D007955 ORTHO05D010034 3.4e-29 131.7 62 90.3
CsaV3_2G014460 Cucumis sativus L. HOM05D007955 ORTHO05D010034 3.4e-29 131.7 62 90.3
VMungo1127G1330 Vigna mungo HOM05D007955 ORTHO05D010034 8.5e-28 127.1 110 60.9
Migut.C01298 Erythranthe guttata HOM05D007955 ORTHO05D010034 2.1e-26 122.5 89 66.3
C08p21650 Brassica napus HOM05D000726 ORTHO05D010034 4.7e-26 121.3 69 78.3
A08p28450 Brassica napus HOM05D000726 ORTHO05D010034 3.9e-25 118.2 92 68.5
Aqoxy6G00096 Aquilegia oxysepala HOM05D007955 ORTHO05D010034 2.0e-24 115.9 92 56.5
BraA08t34774Z Brassica rapa HOM05D000726 ORTHO05D010034 1.3e-23 113.2 114 57.0
Haze_21296 Corylus avellana HOM05D007955 ORTHO05D010034 1.7e-23 112.8 122 50.8
Cfa012936 Carpinus fangiana HOM05D007955 ORTHO05D010034 2.2e-23 112.5 121 50.4
CiPaw.07G236600 Carya illinoinensis HOM05D007955 ORTHO05D010034 6.3e-23 110.9 124 50.8
TPR.G34150 Trifolium pratense HOM05D007955 ORTHO05D010034 1.8e-22 109.4 116 53.4
Nn3g20179 Nelumbo nucifera HOM05D007955 ORTHO05D010034 5.9e-21 104.4 106 55.7
Prupe.1G552800 Prunus persica HOM05D007955 ORTHO05D010034 5.9e-21 104.4 99 55.6
Pp3c19_10130 Physcomitrium patens HOM05D007955 ORTHO05D010034 7.7e-21 104.0 67 68.7
HPP92_004623 Vanilla planifolia HOM05D007955 ORTHO05D010034 2.2e-20 102.4 84 59.5
Os05g0105800 Oryza sativa ssp. japonica HOM05D007955 ORTHO05D010034 3.8e-20 101.7 45 95.6
Medtr4g032905 Medicago truncatula HOM05D007955 ORTHO05D010034 5.0e-20 101.3 122 49.2
SGA_v2.0_scaffold24G10574 Striga asiatica HOM05D007955 ORTHO05D010034 1.5e-19 99.8 76 67.1
SMO119G0376 Selaginella moellendorffii HOM05D007955 ORTHO05D010034 5.5e-19 97.8 64 68.8
SEGI_23617 Sequoiadendron giganteum HOM05D007955 ORTHO05D010034 5.5e-19 97.8 81 61.7
vmacro12469 Vaccinium macrocarpon HOM05D007955 ORTHO05D010034 1.4e-17 93.2 46 87.0
AagrBONN_evm.TU.Sc2ySwM_228.898 Anthoceros agrestis HOM05D007955 ORTHO05D010034 2.3e-17 92.4 91 51.6
Cc00_g22060 Coffea canephora HOM05D007955 ORTHO05D010034 2.3e-17 92.4 84 61.9
unitig_578.g16590 Utricularia gibba HOM05D007955 ORTHO05D010034 8.8e-17 90.5 87 56.3
PSO782G1662 Papaver somniferum HOM05D007955 ORTHO05D010034 3.3e-16 88.6 78 60.3
PSO170G1023 Papaver somniferum HOM05D007955 ORTHO05D010034 1.3e-15 86.7 117 44.4
Zm00001eb356110 Zea mays HOM05D007955 ORTHO05D010034 1.3e-15 86.7 85 51.8
Mapoly0510s0001 Marchantia polymorpha HOM05D007955 ORTHO05D010034 8.2e-15 84.0 94 51.1
FAN08G1854 Fragaria x ananassa HOM05D000666 ORTHO05D001431 4.1e-14 81.6 66 66.7
FAN13G0857 Fragaria x ananassa HOM05D000666 ORTHO05D001431 1.2e-13 80.1 66 65.2
Sed0016691 Sechium edule HOM05D007955 ORTHO05D010034 1.9e-11 72.8 69 53.6
CBR_g36554 Chara braunii HOM05D007955 ORTHO05D010034 4.4e-08 61.6 30 83.3


User provided reference genes

Program Settings