Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021280.2 Solanum lycopersicum HOM05D001070 ORTHO05D010233 3.8e-43 177.6 78 100.0
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 8.8e-40 166.4 77 94.8
Solyc00g500125.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 8.8e-40 166.4 77 94.8
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 8.8e-40 166.4 77 94.8
SalBow1G2240 Salvia bowleyana HOM05D001070 ORTHO05D005132 1.8e-32 142.1 77 79.2
Migut.D01246 Erythranthe guttata HOM05D001070 ORTHO05D010233 2.3e-32 141.7 77 80.5
Gohir.A11G193450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 4.8e-30 134.0 73 80.8
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 2.7e-28 128.3 81 72.8
BolSC45t60903H Brassica oleracea HOM05D001070 ORTHO05D005132 7.2e-26 120.2 78 67.9
BraSC143t45654Z Brassica rapa HOM05D001070 ORTHO05D005132 7.2e-26 120.2 78 67.9
BraSC59t46556Z Brassica rapa HOM05D001070 ORTHO05D005132 7.2e-26 120.2 78 67.9
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 7.2e-26 120.2 79 69.6
GSVIVG01029582001 Vitis vinifera HOM05D001070 ORTHO05D010233 9.4e-26 119.8 77 70.1
BolSC47t61061H Brassica oleracea HOM05D001070 ORTHO05D010233 3.6e-25 117.9 77 67.5
BraSC59t46531Z Brassica rapa HOM05D001070 ORTHO05D010233 6.1e-25 117.1 81 66.7
Oeu058851.1 Olea europaea HOM05D001070 ORTHO05D010233 2.6e-23 111.7 73 72.6
FAN09G0308 Fragaria x ananassa HOM05D001070 ORTHO05D010233 3.4e-23 111.3 77 64.9
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.9e-22 107.5 77 61.0
HanXRQChr00c0336g0573721 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-22 106.7 79 64.6
HanXRQChr00c0703g0576901 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-22 106.7 79 64.6
HanXRQChr02g0059751 Helianthus annuus HOM05D001070 ORTHO05D005132 8.3e-22 106.7 79 64.6
HanXRQChr03g0087611 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-22 106.7 79 64.6
HanXRQChr09g0258461 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-22 106.7 79 64.6
HanXRQChr15g0465491 Helianthus annuus HOM05D001070 ORTHO05D010233 8.3e-22 106.7 79 64.6
HanXRQChr17g0569701 Helianthus annuus HOM05D001070 ORTHO05D005132 8.3e-22 106.7 79 64.6
HanXRQCPg0580321 Helianthus annuus HOM05D001070 ORTHO05D005132 8.3e-22 106.7 79 64.6
Lalb_Chr07g0191841 Lupinus albus HOM05D001070 ORTHO05D002096 8.3e-22 106.7 79 67.1
PSO210G2726 Papaver somniferum HOM05D001070 ORTHO05D010233 2.7e-20 101.7 78 61.5
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 2.7e-20 101.7 78 61.5
PSO357G0618 Papaver somniferum HOM05D001070 ORTHO05D005132 3.5e-20 101.3 78 61.5
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 1.2e-17 92.8 80 55.0
Gorai.010G119900 Gossypium raimondii HOM05D001070 ORTHO05D010233 4.0e-16 87.8 49 75.5
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 6.8e-16 87.0 94 43.6
Nitab4.5_0020415g0010 Nicotiana tabacum HOM05D001133 ORTHO05D000941 4.4e-15 84.3 47 76.6
Peaxi162Scf01305g00038 Petunia axillaris HOM05D001070 ORTHO05D005132 5.7e-15 84.0 43 83.7
Gorai.008G073700 Gossypium raimondii HOM05D001070 ORTHO05D010233 4.9e-14 80.9 48 72.9
Gohir.D04G101450 Gossypium hirsutum HOM05D001070 ORTHO05D010233 6.3e-14 80.5 52 65.4
Solyc00g500042.1 Solanum lycopersicum HOM05D001070 ORTHO05D005132 1.8e-13 79.0 33 100.0
Glyma.13G038800 Glycine max HOM05D001070 ORTHO05D010233 9.2e-13 76.6 71 53.5
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 9.2e-13 76.6 77 51.9
SEGI_13637 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.5e-12 74.7 81 44.4
SEGI_15283 Sequoiadendron giganteum HOM05D009451 ORTHO05D000681 3.5e-12 74.7 81 44.4
SEGI_17643 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.5e-12 74.7 81 44.4
SEGI_27541 Sequoiadendron giganteum HOM05D000190 ORTHO05D000113 3.5e-12 74.7 81 44.4
SEGI_31203 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.5e-12 74.7 81 44.4
SEGI_32990 Sequoiadendron giganteum HOM05D009451 ORTHO05D018118 3.5e-12 74.7 81 44.4
SEGI_41003 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 3.5e-12 74.7 81 44.4
C02p28790 Brassica napus HOM05D001070 ORTHO05D010233 5.9e-12 73.9 45 71.1
SEGI_40582 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 7.8e-12 73.6 81 44.4
SEGI_08955 Sequoiadendron giganteum HOM05D009451 ORTHO05D010233 8.6e-11 70.1 81 43.2
Lsat_1_v5_gn_0_20081 Lactuca sativa HOM05D001070 ORTHO05D010233 2.5e-10 68.6 55 54.5
Medtr8g030390 Medicago truncatula HOM05D001070 ORTHO05D010233 1.3e-06 56.2 48 45.8


User provided reference genes

Program Settings