Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021230.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 7.4e-101 370.5 188 100.0
Solyc00g500041.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.3e-89 333.2 176 95.5
CAN.G1045.10 Capsicum annuum HOM05D000533 ORTHO05D002807 2.5e-88 328.9 175 94.9
CAN.G1298.18 Capsicum annuum HOM05D000533 ORTHO05D002807 2.5e-88 328.9 175 94.9
CAN.G1526.1 Capsicum annuum HOM05D000533 ORTHO05D002807 2.5e-88 328.9 175 94.9
Solyc00g500086.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-88 328.9 176 93.8
Solyc00g500123.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-88 328.9 176 93.8
Solyc00g500193.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 2.5e-88 328.9 176 93.8
PGR111G0022 Punica granatum HOM05D000533 ORTHO05D002807 6.7e-86 320.9 188 85.6
Migut.D01249 Erythranthe guttata HOM05D000533 ORTHO05D002807 9.7e-85 317.0 180 88.9
HanXRQChr09g0258481 Helianthus annuus HOM05D000533 ORTHO05D001069 9.7e-85 317.0 175 90.9
SalBow1G0006 Salvia bowleyana HOM05D000533 ORTHO05D002807 1.3e-84 316.6 188 85.1
Lju5009P0T26 Lonicera japonica HOM05D000533 ORTHO05D002807 6.3e-84 314.3 188 84.0
DCAR_032541 Daucus carota HOM05D000533 ORTHO05D002807 1.4e-83 313.2 188 84.0
EL10Ac1g02291 Beta vulgaris HOM05D000533 ORTHO05D002807 7.0e-83 310.8 175 88.6
EL10As15g24098 Beta vulgaris HOM05D000533 ORTHO05D002807 7.0e-83 310.8 175 88.6
Peaxi162Scf00030g02119 Petunia axillaris HOM05D000533 ORTHO05D006151 2.6e-82 308.9 160 95.0
Peaxi162Scf00269g01411 Petunia axillaris HOM05D000533 ORTHO05D006151 2.6e-82 308.9 160 95.0
HanXRQChr00c0289g0573151 Helianthus annuus HOM05D000533 ORTHO05D002807 1.5e-80 303.1 174 86.8
Sed0004290 Sechium edule HOM05D000533 ORTHO05D002807 1.9e-80 302.8 180 85.0
C09p40310 Brassica napus HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BolSC29t60509H Brassica oleracea HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BolSC35t60689H Brassica oleracea HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BolSC35t60707H Brassica oleracea HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BolSC47t61062H Brassica oleracea HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BolSC49t61146H Brassica oleracea HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BraSC103t45432Z Brassica rapa HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BraSC143t45657Z Brassica rapa HOM05D000533 ORTHO05D002807 3.2e-80 302.0 187 83.4
BolC9t56913H Brassica oleracea HOM05D000533 ORTHO05D002807 4.2e-80 301.6 187 83.4
ATCG01100 Arabidopsis thaliana HOM05D000533 ORTHO05D002807 9.4e-80 300.4 188 81.4
LjContig00318g0007609 Lotus japonicus HOM05D000533 ORTHO05D002807 9.4e-80 300.4 187 82.4
LjContig00319g0005103 Lotus japonicus HOM05D000533 ORTHO05D002807 9.4e-80 300.4 187 82.4
AL9U11959 Arabidopsis lyrata HOM05D000533 ORTHO05D002807 2.1e-79 299.3 187 82.4
PSO548G0012 Papaver somniferum HOM05D000533 ORTHO05D002807 1.0e-78 297.0 180 83.9
CARHR282470 Cardamine hirsuta HOM05D000533 ORTHO05D002807 3.0e-78 295.4 188 81.4
HanXRQChr15g0465421 Helianthus annuus HOM05D000533 ORTHO05D001069 8.8e-78 293.9 160 90.0
HanXRQChr15g0465471 Helianthus annuus HOM05D000533 ORTHO05D001069 8.8e-78 293.9 160 90.0
HanXRQChr17g0569711 Helianthus annuus HOM05D000533 ORTHO05D001069 8.8e-78 293.9 160 90.0
HanXRQChr17g0569761 Helianthus annuus HOM05D000533 ORTHO05D001069 8.8e-78 293.9 160 90.0
HanXRQCPg0580331 Helianthus annuus HOM05D000533 ORTHO05D001069 8.8e-78 293.9 160 90.0
Sed0023589 Sechium edule HOM05D000533 ORTHO05D002807 8.8e-78 293.9 174 83.9
BolSC29t60549H Brassica oleracea HOM05D000533 ORTHO05D002807 1.5e-77 293.1 178 83.1
arahy.Tifrunner.gnm1.ann1.RBM67I Arachis hypogaea HOM05D000533 ORTHO05D002807 9.7e-77 290.4 176 83.5
arahy.Tifrunner.gnm1.ann1.U57TMC Arachis hypogaea HOM05D000533 ORTHO05D002807 2.4e-75 285.8 176 82.4
BolSC44t60825H Brassica oleracea HOM05D000533 ORTHO05D002807 2.0e-74 282.7 172 83.1
MBI10_g47594_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 7.7e-74 280.8 161 85.7
Medtr4g006100 Medicago truncatula HOM05D000533 ORTHO05D001069 5.0e-73 278.1 172 80.8
Medtr4g050810 Medicago truncatula HOM05D000533 ORTHO05D006151 1.1e-72 276.9 162 84.0
arahy.Tifrunner.gnm1.ann1.CXW88U Arachis hypogaea HOM05D000533 ORTHO05D002807 1.6e-71 273.1 167 81.4
Psat7g150960 Pisum sativum HOM05D000533 ORTHO05D001069 3.6e-71 271.9 172 78.5
Medtr7g021700 Medicago truncatula HOM05D000533 ORTHO05D006151 4.7e-71 271.6 178 78.1
MELO3C000179.2 Cucumis melo HOM05D000533 ORTHO05D002807 4.8e-68 261.5 157 84.7
Solyc02g080275.1 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.4e-67 260.0 139 94.2
Sed0023659 Sechium edule HOM05D000533 ORTHO05D002807 1.5e-64 250.0 174 74.1
BraSC58t46464Z Brassica rapa HOM05D000533 ORTHO05D002807 1.9e-64 249.6 191 71.2
Lsat_1_v5_gn_4_118121 Lactuca sativa HOM05D000533 ORTHO05D002807 1.8e-62 243.0 160 76.2
Sed0007463 Sechium edule HOM05D000533 ORTHO05D002807 1.5e-61 240.0 174 72.4
Gohir.1Z049702 Gossypium hirsutum HOM05D000533 ORTHO05D002807 1.7e-60 236.5 142 85.9
MBI10_g47589_MAGBIO Magnolia biondii HOM05D000533 ORTHO05D001069 2.2e-60 236.1 161 74.5
Medtr6g042200 Medicago truncatula HOM05D000533 ORTHO05D001069 5.6e-56 221.5 146 77.4
Gohir.D05G308833 Gossypium hirsutum HOM05D000533 ORTHO05D002807 2.2e-52 209.5 116 84.5
Solyc11g050760.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 1.1e-51 207.2 111 90.1
Gorai.009G395200 Gossypium raimondii HOM05D000533 ORTHO05D002807 1.4e-51 206.8 168 65.5
Lalb_Chr07g0191801 Lupinus albus HOM05D000533 ORTHO05D002807 6.6e-49 198.0 128 82.8
arahy.Tifrunner.gnm1.ann1.F0S3GF Arachis hypogaea HOM05D000533 ORTHO05D002807 1.9e-48 196.4 127 81.1
FAN01G0230 Fragaria x ananassa HOM05D000533 ORTHO05D002807 3.3e-48 195.7 118 81.4
Nitab4.5_0001313g0090 Nicotiana tabacum HOM05D000533 ORTHO05D002807 9.5e-48 194.1 124 81.5
Gohir.A10G063750 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.6e-47 192.2 99 88.9
EL10As15g24139 Beta vulgaris HOM05D000533 ORTHO05D002807 6.2e-47 191.4 142 69.0
BolC2t10599H Brassica oleracea HOM05D000533 ORTHO05D002807 4.0e-46 188.7 119 81.5
HanXRQChr00c0504g0575311 Helianthus annuus HOM05D000533 ORTHO05D006151 3.4e-45 185.7 132 76.5
Nitab4.5_0001783g0140 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.9e-44 181.8 111 87.4
Nn1g07318 Nelumbo nucifera HOM05D000533 ORTHO05D002807 1.1e-43 180.6 93 90.3
TPR.G31189 Trifolium pratense HOM05D000533 ORTHO05D002807 1.4e-43 180.3 107 81.3
Lsat_1_v5_gn_8_62921 Lactuca sativa HOM05D000533 ORTHO05D002807 7.8e-42 174.5 104 80.8
HanXRQChr00c0336g0573691 Helianthus annuus HOM05D000533 ORTHO05D002807 1.3e-41 173.7 99 86.9
HanXRQChr02g0059741 Helianthus annuus HOM05D000533 ORTHO05D001069 1.3e-41 173.7 99 86.9
BraSC138t45532Z Brassica rapa HOM05D000533 ORTHO05D002807 7.3e-40 167.9 149 63.1
SMO086G0018 Selaginella moellendorffii HOM05D000533 ORTHO05D002807 2.1e-39 166.4 176 54.5
CsaV3_1G022940 Cucumis sativus L. HOM05D000533 ORTHO05D002807 1.5e-37 160.2 80 93.8
Solyc02g011790.2 Solanum lycopersicum HOM05D000533 ORTHO05D002807 4.4e-37 158.7 162 58.6
CSS0023353 Camellia sinensis var. sinensis HOM05D000533 ORTHO05D006151 3.7e-36 155.6 130 63.8
Glyma.18G155550 Glycine max HOM05D000533 ORTHO05D002807 8.3e-36 154.5 125 69.6
Psat1g104920 Pisum sativum HOM05D000533 ORTHO05D002807 1.1e-35 154.1 80 87.5
Nitab4.5_0017884g0010 Nicotiana tabacum HOM05D000533 ORTHO05D002807 3.5e-34 149.1 102 72.5
Nn1g00560 Nelumbo nucifera HOM05D000533 ORTHO05D002807 2.5e-32 142.9 73 89.0
Duzib093G2216 Durio zibethinus HOM05D000533 ORTHO05D002807 4.3e-32 142.1 136 62.5
Gohir.D11G334101 Gossypium hirsutum HOM05D000533 ORTHO05D002807 3.6e-31 139.0 82 81.7
Eucgr.B03250 Eucalyptus grandis HOM05D000533 ORTHO05D002807 3.1e-30 136.0 72 90.3
COL.COLO4_02137 Corchorus olitorius HOM05D000533 ORTHO05D002807 6.8e-30 134.8 188 40.4
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 1.2e-29 134.0 93 76.3
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.2e-29 134.0 93 76.3
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 1.2e-29 134.0 93 76.3
HanXRQChr01g0020061 Helianthus annuus HOM05D000533 ORTHO05D006151 1.5e-29 133.7 136 59.6
Lalb_Chr09g0335431 Lupinus albus HOM05D000533 ORTHO05D002807 5.4e-27 125.2 103 68.9
Nitab4.5_0001783g0070 Nicotiana tabacum HOM05D000216 ORTHO05D002807 2.8e-23 112.8 69 84.1
HanXRQChr01g0000271 Helianthus annuus HOM05D000533 ORTHO05D001069 1.8e-22 110.2 56 87.5
Medtr4g451555 Medicago truncatula HOM05D000533 ORTHO05D002807 3.1e-22 109.4 71 77.5
RcHm_v2.0_CPg0502741 Rosa chinensis HOM05D000533 ORTHO05D002807 1.2e-21 107.5 64 89.1
Gohir.D04G093016 Gossypium hirsutum HOM05D000533 ORTHO05D002807 4.4e-21 105.5 174 43.7
Lsat_1_v5_gn_5_174020 Lactuca sativa HOM05D000533 ORTHO05D002807 3.2e-19 99.4 65 72.3
CARHR060450 Cardamine hirsuta HOM05D000533 ORTHO05D002807 1.7e-17 93.6 50 84.0
HanXRQChr00c0703g0576931 Helianthus annuus HOM05D000533 ORTHO05D002807 3.9e-17 92.4 76 64.5
Migut.D01386 Erythranthe guttata HOM05D000533 ORTHO05D002807 2.5e-16 89.7 40 97.5
arahy.Tifrunner.gnm1.ann1.9IC8RT Arachis hypogaea HOM05D000533 ORTHO05D002807 1.6e-15 87.0 47 80.9
arahy.Tifrunner.gnm1.ann1.KIF45B Arachis hypogaea HOM05D000533 ORTHO05D002807 3.6e-15 85.9 42 83.3
Sabra10G0056200 Salix brachista HOM05D000533 ORTHO05D001069 2.6e-13 79.7 107 48.6
Psat0s1160g0360 Pisum sativum HOM05D000533 ORTHO05D006151 1.7e-12 77.0 48 77.1
Psat0s6989g0200 Pisum sativum HOM05D000533 ORTHO05D006151 1.7e-12 77.0 48 77.1
Psat3g095000 Pisum sativum HOM05D000533 ORTHO05D006151 1.7e-12 77.0 48 77.1
Psat6g140600 Pisum sativum HOM05D000533 ORTHO05D006151 1.7e-12 77.0 48 77.1
EL10Ac6g14288 Beta vulgaris HOM05D000533 ORTHO05D002807 2.4e-11 73.2 36 83.3
BolSC37t60796H Brassica oleracea HOM05D000533 ORTHO05D002807 4.2e-11 72.4 40 82.5
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 7.4e-08 61.6 64 46.9
EL10Ac6g13955 Beta vulgaris HOM05D000533 ORTHO05D002807 3.1e-06 56.2 28 89.3


User provided reference genes

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