Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 4.1e-65 251.1 117 100.0
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 5.2e-28 127.9 117 59.8
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 1.2e-24 116.7 142 48.6
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.0e-23 112.1 117 53.0
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 3.0e-23 112.1 134 52.2
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.5e-22 109.8 85 65.9
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 1.2e-21 106.7 116 52.6
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 9.8e-19 97.1 68 69.1
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 1.7e-18 96.3 95 54.7
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 1.7e-18 96.3 49 93.9
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.2e-18 95.9 76 63.2
DCAR_001145 Daucus carota HOM05D001966 ORTHO05D010055 6.4e-18 94.4 48 93.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.9e-17 92.8 48 89.6
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 5.4e-17 91.3 45 91.1
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 9.2e-17 90.5 53 83.0
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.6e-16 89.7 49 83.7
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 3.5e-16 88.6 48 85.4
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 1.0e-15 87.0 86 53.5
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 1.3e-15 86.7 112 47.3
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 5.1e-15 84.7 82 57.3
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 6.6e-15 84.3 44 86.4
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.5e-14 83.2 70 60.0
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 1.5e-14 83.2 108 44.4
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 2.5e-14 82.4 45 86.7
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 4.3e-14 81.6 113 42.5
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 9.5e-14 80.5 48 81.2
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 1.2e-13 80.1 111 42.3
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 2.1e-13 79.3 112 42.0
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 6.2e-13 77.8 123 39.0
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 6.2e-13 77.8 123 39.0
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.5e-11 73.2 119 38.7
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 7.5e-11 70.9 41 80.5
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 9.9e-11 70.5 43 76.7
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.3e-10 70.1 37 89.2
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 1.7e-10 69.7 38 86.8
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.9e-10 68.9 38 86.8
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-10 68.6 57 61.4
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 3.7e-10 68.6 57 61.4
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 3.7e-10 68.6 40 80.0
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 4.9e-10 68.2 106 39.6
Peaxi162Scf00080g00519 Petunia axillaris HOM05D001966 ORTHO05D010055 4.9e-10 68.2 41 78.0
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 6.4e-10 67.8 33 87.9
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 6.4e-10 67.8 33 87.9
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 8.3e-10 67.4 39 74.4
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 8.3e-10 67.4 36 80.6
CAN.G82.6 Capsicum annuum HOM05D000011 ORTHO05D000018 1.4e-09 66.6 31 96.8
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 2.4e-09 65.9 36 77.8
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 3.2e-09 65.5 36 83.3
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 4.1e-09 65.1 40 80.0
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 7.1e-09 64.3 112 37.5
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.6e-08 63.2 39 82.1
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 2.7e-08 62.4 168 35.1
Solyc11g072780.1 Solanum lycopersicum HOM05D001966 ORTHO05D004271 4.6e-08 61.6 39 71.8
EL10Ac6g14593 Beta vulgaris HOM05D001966 ORTHO05D010055 7.8e-08 60.8 29 93.1
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 7.8e-08 60.8 33 78.8
arahy.Tifrunner.gnm1.ann1.PRQI1Y Arachis hypogaea HOM05D008016 ORTHO05D010588 1.0e-07 60.5 38 73.7
arahy.Tifrunner.gnm1.ann1.JWI1UU Arachis hypogaea HOM05D009726 ORTHO05D010588 2.3e-07 59.3 41 65.9
arahy.Tifrunner.gnm1.ann1.R58SNE Arachis hypogaea HOM05D008016 ORTHO05D010055 2.3e-07 59.3 49 67.3
arahy.Tifrunner.gnm1.ann1.V4KXIX Arachis hypogaea HOM05D009726 ORTHO05D010588 3.0e-07 58.9 38 73.7
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 3.0e-07 58.9 44 65.9
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 5.1e-07 58.2 28 89.3
Psat5g119000 Pisum sativum HOM05D009726 ORTHO05D010588 6.6e-07 57.8 49 59.2
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 2.5e-06 55.8 52 57.7
arahy.Tifrunner.gnm1.ann1.WK7HZX Arachis hypogaea HOM05D009726 ORTHO05D010588 4.3e-06 55.1 36 69.4
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 4.3e-06 55.1 44 63.6
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 5.6e-06 54.7 44 63.6
arahy.Tifrunner.gnm1.ann1.9FU6Q4 Arachis hypogaea HOM05D009726 ORTHO05D010588 7.3e-06 54.3 63 46.0
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 9.5e-06 53.9 26 84.6


User provided reference genes

Program Settings