Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 6.9e-279 963.4 503 100.0
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 2.5e-276 954.9 503 99.0
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 6.3e-256 887.1 503 92.6
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 1.6e-235 819.3 503 85.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 1.9e-204 716.1 509 76.8
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 4.3e-204 714.9 503 77.5
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.1e-163 579.7 399 77.4
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 1.0e-109 401.4 518 45.9
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 8.3e-107 391.7 510 46.5
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 7.8e-105 385.2 500 47.2
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 6.6e-104 382.1 505 45.3
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 8.6e-104 381.7 507 46.5
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 5.6e-103 379.0 517 46.6
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 4.1e-98 362.8 515 44.1
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 7.8e-97 358.6 516 45.5
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 8.6e-96 355.1 523 44.2
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 1.5e-95 354.4 518 45.9
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 2.8e-94 350.1 528 43.8
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 2.3e-93 347.1 509 40.5
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 2.7e-89 333.6 478 45.6
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 1.3e-88 331.3 506 42.1
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 5.1e-88 329.3 515 41.7
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 1.5e-87 327.8 509 40.9
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 1.5e-84 317.8 519 40.1
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.4e-82 310.5 496 41.1
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 2.5e-79 300.4 506 38.9
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 8.1e-78 295.4 520 37.5
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 1.8e-77 294.3 521 37.6
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 2.0e-76 290.8 515 38.6
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 4.4e-76 289.7 520 37.3
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 8.4e-75 285.4 512 36.9
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 9.3e-74 282.0 511 36.2
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 2.7e-73 280.4 524 37.2
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 7.8e-73 278.9 511 37.0
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 5.1e-72 276.2 516 38.4
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 5.1e-72 276.2 509 36.9
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 5.1e-72 276.2 474 38.8
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 5.1e-72 276.2 507 35.9
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 1.9e-71 274.2 503 38.0
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.5e-71 273.9 512 36.3
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 5.6e-71 272.7 523 36.3
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 9.6e-71 271.9 517 37.5
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 1.3e-70 271.6 520 36.0
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 6.2e-70 269.2 518 36.1
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 1.4e-69 268.1 514 36.4
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 5.3e-69 266.2 514 36.0
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 6.9e-69 265.8 504 36.9
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 9.0e-69 265.4 512 36.1
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 3.4e-68 263.5 512 35.5
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 9.9e-68 261.9 503 36.8
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 2.9e-67 260.4 510 36.9
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 4.9e-67 259.6 476 37.6
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 4.6e-65 253.1 511 35.6
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 4.6e-65 253.1 530 34.9
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 3.0e-64 250.4 514 34.4
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 1.6e-62 244.6 511 34.1
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 2.4e-61 240.7 513 35.9
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 9.0e-61 238.8 520 33.7
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 1.2e-60 238.4 498 34.1
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 4.5e-60 236.5 508 35.2
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 1.1e-58 231.9 503 33.4
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 3.2e-58 230.3 519 34.5
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 2.7e-57 227.3 524 34.5
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 4.6e-57 226.5 521 34.2
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 6.7e-56 222.6 515 34.2
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 1.9e-55 221.1 567 32.5
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 9.6e-55 218.8 509 34.8
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.3e-54 218.4 512 34.8
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 4.0e-53 213.4 501 32.7
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 1.2e-52 211.8 502 33.5
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 2.9e-51 207.2 517 33.3
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.9e-51 207.2 506 32.2
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 6.5e-51 206.1 522 33.3
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.1e-50 205.3 490 30.8
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.4e-50 204.9 519 32.6
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 2.5e-50 204.1 518 32.2
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 3.2e-50 203.8 513 33.3
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 3.2e-50 203.8 513 33.3
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 2.7e-49 200.7 517 33.1
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 3.3e-47 193.7 516 31.6
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 2.0e-44 184.5 404 33.4
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 3.8e-43 180.3 477 32.7
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 5.0e-43 179.9 512 32.8
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 8.5e-43 179.1 361 35.2
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 5.5e-42 176.4 461 31.7
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 2.7e-41 174.1 499 30.3
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 4.6e-41 173.3 510 30.4
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 5.1e-40 169.9 511 30.3
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 7.4e-39 166.0 506 30.4
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 2.4e-37 161.0 509 30.3
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 1.4e-34 151.8 516 29.3
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 1.1e-31 142.1 397 32.2
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.3e-30 138.7 501 28.5
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 1.4e-29 135.2 512 28.5
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 9.1e-29 132.5 238 37.4
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 1.5e-23 115.2 495 27.3
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 1.4e-21 108.6 359 27.3
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 2.3e-16 91.3 296 30.7
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 5.2e-16 90.1 84 56.0
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 3.7e-14 84.0 540 23.7
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 4.8e-14 83.6 139 39.6
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 2.7e-12 77.8 134 37.3
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 5.9e-12 76.6 429 22.8
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 5.5e-10 70.1 113 39.8
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 1.2e-09 68.9 166 32.5
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 8.8e-08 62.8 116 35.3
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 1.5e-07 62.0 69 49.3


User provided reference genes

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