Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 1.3e-33 146.0 82 100.0
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 1.9e-29 132.1 82 92.7
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 2.4e-27 125.2 84 86.9
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.2e-23 112.8 86 72.1
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 7.9e-23 110.2 86 69.8
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 6.7e-22 107.1 85 70.6
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 1.9e-21 105.5 87 69.0
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.5e-21 105.1 80 72.5
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 4.3e-21 104.4 86 70.9
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.6e-21 104.0 76 75.0
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 2.8e-20 101.7 110 58.2
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 6.2e-20 100.5 86 67.4
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 8.1e-20 100.1 107 56.1
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 1.1e-19 99.8 107 56.1
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 5.3e-19 97.4 88 67.0
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 1.7e-17 92.4 86 60.5
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 3.8e-17 91.3 86 66.3
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 8.4e-17 90.1 78 70.5
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 1.9e-16 89.0 86 65.1
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 9.3e-16 86.7 76 64.5
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 2.1e-15 85.5 76 63.2
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 3.5e-15 84.7 79 57.0
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 3.5e-15 84.7 79 57.0
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 5.1e-14 80.9 99 48.5
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 6.7e-14 80.5 82 53.7
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 6.7e-14 80.5 80 52.5
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 8.7e-14 80.1 96 54.2
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.9e-13 79.0 85 47.1
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 5.7e-13 77.4 87 50.6
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 5.7e-13 77.4 85 47.1
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 9.6e-13 76.6 83 49.4
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 9.6e-13 76.6 86 52.3
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.3e-12 76.3 77 54.5
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 1.3e-12 76.3 82 54.9
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 1.3e-12 76.3 78 52.6
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.6e-12 75.9 85 50.6
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 2.8e-12 75.1 79 53.2
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 2.8e-12 75.1 82 50.0
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 2.8e-12 75.1 87 52.9
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 3.7e-12 74.7 90 48.9
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 4.8e-12 74.3 83 51.8
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 4.8e-12 74.3 82 56.1
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 4.8e-12 74.3 87 52.9
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 6.2e-12 73.9 82 46.3
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 8.2e-12 73.6 90 52.2
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.4e-11 72.8 90 48.9
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 1.4e-11 72.8 95 45.3
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 1.4e-11 72.8 87 54.0
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.8e-11 72.4 90 48.9
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.4e-11 72.0 90 48.9
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 2.4e-11 72.0 91 49.5
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 2.4e-11 72.0 93 48.4
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 3.1e-11 71.6 91 47.3
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 3.1e-11 71.6 77 49.4
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 4.0e-11 71.2 90 47.8
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 4.0e-11 71.2 101 44.6
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 5.3e-11 70.9 84 47.6
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 5.3e-11 70.9 94 47.9
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 5.3e-11 70.9 58 70.7
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 9.0e-11 70.1 44 77.3
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 9.0e-11 70.1 102 44.1
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.5e-10 69.3 90 47.8
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.5e-10 69.3 90 47.8
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 1.5e-10 69.3 86 53.5
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 1.5e-10 69.3 46 67.4
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 2.0e-10 68.9 87 47.1
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 2.6e-10 68.6 84 48.8
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 3.4e-10 68.2 39 82.1
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 4.5e-10 67.8 43 76.7
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 4.5e-10 67.8 44 72.7
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 5.8e-10 67.4 86 45.3
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 5.8e-10 67.4 56 64.3
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 5.8e-10 67.4 81 46.9
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 7.6e-10 67.0 79 46.8
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 1.3e-09 66.2 47 66.0
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 1.3e-09 66.2 94 42.6
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.7e-09 65.9 52 61.5
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 1.7e-09 65.9 83 49.4
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 2.2e-09 65.5 52 61.5
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 2.2e-09 65.5 52 61.5
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 2.2e-09 65.5 52 61.5
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.2e-09 65.5 52 61.5
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 2.2e-09 65.5 86 45.3
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 2.2e-09 65.5 53 58.5
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 2.9e-09 65.1 38 78.9
CsaV3_1G036810 Cucumis sativus L. HOM05D006325 ORTHO05D007878 3.8e-09 64.7 76 52.6
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 5.0e-09 64.3 52 63.5
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 5.0e-09 64.3 80 48.8
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 6.5e-09 63.9 52 63.5
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 8.4e-09 63.5 52 57.7
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 8.4e-09 63.5 87 49.4
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.1e-08 63.2 41 70.7
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.1e-08 63.2 41 70.7
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 1.4e-08 62.8 78 48.7
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 1.4e-08 62.8 87 44.8
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 1.9e-08 62.4 52 57.7
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 1.9e-08 62.4 44 65.9
MBI18_g11235_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 2.5e-08 62.0 80 50.0
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 3.2e-08 61.6 52 57.7
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 3.2e-08 61.6 52 57.7
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 3.2e-08 61.6 52 57.7
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 3.2e-08 61.6 52 57.7
Gohir.A06G139600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 3.2e-08 61.6 55 58.2
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 7.1e-08 60.5 52 57.7
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 7.1e-08 60.5 83 47.0
COL.COLO4_31021 Corchorus olitorius HOM05D006325 ORTHO05D007878 7.1e-08 60.5 37 75.7
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 7.1e-08 60.5 46 58.7
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 7.1e-08 60.5 46 58.7
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 7.1e-08 60.5 52 63.5
Gohir.D06G144350 Gossypium hirsutum HOM05D006325 ORTHO05D007878 9.3e-08 60.1 54 57.4
Gorai.010G168000 Gossypium raimondii HOM05D006325 ORTHO05D007878 9.3e-08 60.1 54 57.4
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 9.3e-08 60.1 39 69.2
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 2.1e-07 58.9 46 56.5
Sed0022207 Sechium edule HOM05D006325 ORTHO05D007878 2.1e-07 58.9 87 44.8
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 2.7e-07 58.5 56 53.6
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 3.5e-07 58.2 44 59.1
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 3.5e-07 58.2 98 38.8
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 4.6e-07 57.8 40 65.0
C01p14990 Brassica napus HOM05D012071 ORTHO05D013970 6.1e-07 57.4 81 48.1
Aqoxy4G00063 Aquilegia oxysepala HOM05D006325 ORTHO05D007878 1.8e-06 55.8 78 41.0
MBI02_g07020_MAGBIO Magnolia biondii HOM05D006325 ORTHO05D007878 1.8e-06 55.8 82 51.2
Gohir.A10G043400 Gossypium hirsutum HOM05D006325 ORTHO05D007878 3.9e-06 54.7 44 63.6
Gohir.D10G044600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 3.9e-06 54.7 44 63.6
Gorai.011G047600 Gossypium raimondii HOM05D006325 ORTHO05D007878 3.9e-06 54.7 44 63.6


User provided reference genes

Program Settings