Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020710.2 Solanum lycopersicum HOM05D007940 ORTHO05D010046 6.9e-47 190.3 94 100.0
Sopen11g010730 Solanum pennellii HOM05D007940 ORTHO05D010046 2.0e-46 188.7 94 98.9
Migut.M01978 Erythranthe guttata HOM05D007940 ORTHO05D010046 4.9e-29 131.0 79 77.2
Sc16g0011710 Simmondsia chinensis HOM05D007940 ORTHO05D010046 1.4e-28 129.4 93 69.9
SalBow6G6284 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.9e-28 129.0 79 75.9
SalBow8G3130 Salvia bowleyana HOM05D007940 ORTHO05D010046 1.9e-28 129.0 79 75.9
SGA_v2.0_scaffold298G47684 Striga asiatica HOM05D007940 ORTHO05D010046 5.5e-28 127.5 79 74.7
Oeu008726.1 Olea europaea HOM05D007940 ORTHO05D010046 7.1e-28 127.1 83 72.3
MD10G1233500 Malus domestica HOM05D007940 ORTHO05D010046 4.6e-27 124.4 83 68.7
Sabra15G0137900 Salix brachista HOM05D007940 ORTHO05D010046 7.9e-27 123.6 80 72.5
Thecc.06G142100 Theobroma cacao HOM05D007940 ORTHO05D010046 7.9e-27 123.6 85 68.2
Potri.015G121500 Populus trichocarpa HOM05D007940 ORTHO05D010046 1.3e-26 122.9 80 71.2
MD05G1252500 Malus domestica HOM05D007940 ORTHO05D010046 2.3e-26 122.1 82 68.3
Nn7g38154 Nelumbo nucifera HOM05D007940 ORTHO05D010046 5.1e-26 120.9 85 67.1
Manes.16G057400 Manihot esculenta HOM05D007940 ORTHO05D010046 1.5e-25 119.4 87 64.4
DCAR_003782 Daucus carota HOM05D007940 ORTHO05D010046 1.9e-25 119.0 85 65.9
Hma1.2p1_0040F.1_g025155 Hydrangea macrophylla HOM05D007940 ORTHO05D010046 1.9e-25 119.0 83 68.7
Cc09_g06150 Coffea canephora HOM05D007940 ORTHO05D010046 3.3e-25 118.2 80 66.2
RcHm_v2.0_Chr5g0020061 Rosa chinensis HOM05D007940 ORTHO05D010046 4.3e-25 117.9 84 63.1
Actinidia33707 Actinidia chinensis HOM05D007940 ORTHO05D010046 9.6e-25 116.7 81 66.7
Prupe.4G111600 Prunus persica HOM05D007940 ORTHO05D010046 9.6e-25 116.7 79 68.4
Manes.16G056500 Manihot esculenta HOM05D007940 ORTHO05D010046 1.6e-24 115.9 80 65.0
Duzib235G0199 Durio zibethinus HOM05D007940 ORTHO05D010046 6.2e-24 114.0 79 65.8
FAN16G1222 Fragaria x ananassa HOM05D007940 ORTHO05D010046 1.1e-23 113.2 80 65.0
HanXRQChr04g0109371 Helianthus annuus HOM05D007940 ORTHO05D010046 1.4e-23 112.8 87 58.6
Ah.06g193510 Amaranthus hybridus HOM05D007940 ORTHO05D010046 3.1e-23 111.7 87 58.6
Aa31LG2G15120 Aethionema arabicum HOM05D007940 ORTHO05D010046 4.0e-23 111.3 79 64.6
CSS0023427 Camellia sinensis var. sinensis HOM05D007940 ORTHO05D010046 4.0e-23 111.3 76 69.7
Lsat_1_v5_gn_5_23140 Lactuca sativa HOM05D007940 ORTHO05D010046 4.0e-23 111.3 84 59.5
TWI38G0312 Tripterygium wilfordii HOM05D007940 ORTHO05D010046 4.0e-23 111.3 83 60.2
Lalb_Chr07g0188831 Lupinus albus HOM05D007940 ORTHO05D010046 5.3e-23 110.9 81 65.4
QL11p017779 Quercus lobata HOM05D007940 ORTHO05D010046 1.2e-22 109.8 81 61.7
Atru.chr10.309 Acer truncatum HOM05D007940 ORTHO05D010046 1.5e-22 109.4 78 60.3
Phvul.009G252500 Phaseolus vulgaris HOM05D007940 ORTHO05D010046 1.5e-22 109.4 79 62.0
Eucgr.D01043 Eucalyptus grandis HOM05D007940 ORTHO05D010046 2.0e-22 109.0 79 64.6
Glyma.15G146300 Glycine max HOM05D007940 ORTHO05D010046 2.6e-22 108.6 82 62.2
AL1G49310 Arabidopsis lyrata HOM05D007940 ORTHO05D010046 3.4e-22 108.2 79 63.3
FAN21G0368 Fragaria x ananassa HOM05D007940 ORTHO05D010046 4.5e-22 107.8 80 63.8
ClCG01G009440 Citrullus lanatus HOM05D007940 ORTHO05D010046 7.6e-22 107.1 81 63.0
AT1G31175 Arabidopsis thaliana HOM05D007940 ORTHO05D010046 1.3e-21 106.3 79 63.3
Carub.0001s2958 Capsella rubella HOM05D007940 ORTHO05D010046 1.3e-21 106.3 79 62.0
Medtr2g435250 Medicago truncatula HOM05D007940 ORTHO05D010046 1.3e-21 106.3 91 54.9
Psat1g156840 Pisum sativum HOM05D007940 ORTHO05D010046 1.3e-21 106.3 80 60.0
Aqoxy3G00719 Aquilegia oxysepala HOM05D007940 ORTHO05D010046 1.7e-21 105.9 91 57.1
BcaC05g27148 Brassica carinata HOM05D007940 ORTHO05D010046 2.2e-21 105.5 79 60.8
BcaC09g51575 Brassica carinata HOM05D007940 ORTHO05D010046 2.2e-21 105.5 79 60.8
BolC1t01151H Brassica oleracea HOM05D007940 ORTHO05D010046 2.2e-21 105.5 79 60.8
MELO3C021755.2 Cucumis melo HOM05D007940 ORTHO05D010046 2.2e-21 105.5 86 61.6
TPR.G22024 Trifolium pratense HOM05D007940 ORTHO05D010046 2.2e-21 105.5 80 60.0
BcaB07g32779 Brassica carinata HOM05D007940 ORTHO05D010046 2.9e-21 105.1 81 59.3
THA.LOC104798551 Tarenaya hassleriana HOM05D007940 ORTHO05D010046 2.9e-21 105.1 83 61.4
CARHR030670 Cardamine hirsuta HOM05D007940 ORTHO05D010046 3.8e-21 104.8 81 60.5
Ca_01891_v3 Cicer arietinum L. HOM05D007940 ORTHO05D010046 3.8e-21 104.8 80 60.0
Sp1g27000 Schrenkiella parvula HOM05D007940 ORTHO05D010046 3.8e-21 104.8 79 60.8
Thhalv10009859m.g Eutrema salsugineum HOM05D007940 ORTHO05D010046 4.9e-21 104.4 79 59.5
A09p35060 Brassica napus HOM05D007940 ORTHO05D010046 6.5e-21 104.0 79 60.8
BraA09t39037Z Brassica rapa HOM05D007940 ORTHO05D010046 6.5e-21 104.0 79 60.8
EL10Ac4g10315 Beta vulgaris HOM05D007940 ORTHO05D010046 8.4e-21 103.6 73 64.4
Sed0008509 Sechium edule HOM05D007940 ORTHO05D010046 8.4e-21 103.6 92 56.5
HPP92_017565 Vanilla planifolia HOM05D007940 ORTHO05D010046 3.2e-20 101.7 84 58.3
CANSAT35G1488 Cannabis sativa HOM05D007940 ORTHO05D010046 9.3e-20 100.1 81 59.3
Cfa019394 Carpinus fangiana HOM05D007940 ORTHO05D010046 2.7e-19 98.6 81 56.8
MBI02_g13338_MAGBIO Magnolia biondii HOM05D007940 ORTHO05D010046 7.9e-19 97.1 71 63.4
Os07g0567500 Oryza sativa ssp. japonica HOM05D007940 ORTHO05D010046 1.0e-18 96.7 85 55.3
Gohir.D05G147600 Gossypium hirsutum HOM05D007940 ORTHO05D010046 6.7e-18 94.0 79 55.7
Zm00001eb107160 Zea mays HOM05D007940 ORTHO05D010046 8.7e-18 93.6 85 52.9
COL.COLO4_30989 Corchorus olitorius HOM05D007940 ORTHO05D010046 1.1e-17 93.2 81 53.1
Gorai.009G151700 Gossypium raimondii HOM05D007940 ORTHO05D010046 9.7e-17 90.1 79 54.4
Gohir.D05G147732 Gossypium hirsutum HOM05D007940 ORTHO05D010046 1.3e-16 89.7 79 54.4
Ciclev10017318m.g Citrus clementina HOM05D007940 ORTHO05D010046 1.1e-15 86.7 79 55.7
PSO675G1966 Papaver somniferum HOM05D007940 ORTHO05D010046 1.3e-13 79.7 55 61.8
CBR_g28534 Chara braunii HOM05D007940 ORTHO05D010046 5.5e-12 74.3 83 47.0
SMO347G0336 Selaginella moellendorffii HOM05D007940 ORTHO05D010046 5.1e-10 67.8 80 38.8
CsaV3_1G046330 Cucumis sativus L. HOM05D007940 ORTHO05D010046 2.0e-09 65.9 57 54.4
TAR624G1282 Trochodendron aralioides HOM05D007940 ORTHO05D010046 3.7e-08 61.6 57 52.6
SEGI_25488 Sequoiadendron giganteum HOM05D007940 ORTHO05D010046 2.0e-06 55.8 60 38.3


User provided reference genes

Program Settings