Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020570.1 Solanum lycopersicum HOM05D002915 ORTHO05D003004 3.6e-67 258.1 125 100.0
PGSC0003DMG400034346 Solanum tuberosum HOM05D002915 ORTHO05D003004 9.8e-17 90.5 94 47.9
PGSC0003DMG400037269 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.4e-15 86.7 121 39.7
CAN.G1143.27 Capsicum annuum HOM05D002915 ORTHO05D003004 3.2e-15 85.5 121 38.8
Sopen06g010910 Solanum pennellii HOM05D000025 ORTHO05D000136 2.7e-14 82.4 99 42.4
PGSC0003DMG400021580 Solanum tuberosum HOM05D002915 ORTHO05D003004 7.8e-14 80.9 99 41.4
PGSC0003DMG400043813 Solanum tuberosum HOM05D002915 ORTHO05D003004 1.0e-13 80.5 123 35.8
PGSC0003DMG400045670 Solanum tuberosum HOM05D004033 ORTHO05D002701 4.3e-12 75.1 93 43.0
Cc02_g04260 Coffea canephora HOM05D002915 ORTHO05D003004 1.2e-09 67.0 106 36.8
Rhsim12G0105300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.0e-09 66.2 122 28.7
CiPaw.05G115500 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.6e-09 65.9 100 33.0
PGSC0003DMG400038597 Solanum tuberosum HOM05D002915 ORTHO05D003004 4.4e-09 65.1 95 38.9
Migut.H01084 Erythranthe guttata HOM05D002915 ORTHO05D003004 9.9e-09 63.9 123 31.7
vmacro16134 Vaccinium macrocarpon HOM05D002915 ORTHO05D003004 9.9e-09 63.9 123 28.5
Rhsim13G0213700 Rhododendron simsii HOM05D002915 ORTHO05D003004 1.3e-08 63.5 102 30.4
CiPaw.05G115300 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.2e-08 62.8 111 30.6
CiPaw.05G115400 Carya illinoinensis HOM05D002915 ORTHO05D003004 2.2e-08 62.8 111 30.6
Migut.F00575 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.9e-08 62.4 124 31.5
Rhsim02G0221300 Rhododendron simsii HOM05D002915 ORTHO05D003004 2.9e-08 62.4 102 29.4
Sopen04g019620 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-08 62.0 107 35.5
Migut.F00476 Erythranthe guttata HOM05D002915 ORTHO05D003004 6.4e-08 61.2 124 30.6
Rhsim12G0105400 Rhododendron simsii HOM05D002915 ORTHO05D003004 6.4e-08 61.2 102 32.4
CAN.G853.27 Capsicum annuum HOM05D002915 ORTHO05D003004 1.1e-07 60.5 71 42.3
Migut.C00066 Erythranthe guttata HOM05D002915 ORTHO05D003004 1.1e-07 60.5 123 30.9
CSS0045033 Camellia sinensis var. sinensis HOM05D002915 ORTHO05D003004 1.4e-07 60.1 100 31.0
Migut.C00063 Erythranthe guttata HOM05D002915 ORTHO05D003004 2.4e-07 59.3 123 30.9
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 7.1e-07 57.8 79 38.0
Lsat_1_v5_gn_8_150181 Lactuca sativa HOM05D000825 ORTHO05D003684 1.6e-06 56.6 74 35.1
Manes.13G015600 Manihot esculenta HOM05D002915 ORTHO05D003004 1.6e-06 56.6 94 30.9
QL03p054762 Quercus lobata HOM05D002915 ORTHO05D003004 1.6e-06 56.6 93 32.3
PGSC0003DMG400043877 Solanum tuberosum HOM05D002915 ORTHO05D003004 2.7e-06 55.8 94 36.2
Atru.chr11.2288 Acer truncatum HOM05D002915 ORTHO05D003004 6.0e-06 54.7 98 29.6
Manes.12G023850 Manihot esculenta HOM05D002915 ORTHO05D003004 6.0e-06 54.7 104 29.8


User provided reference genes

Program Settings