Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020510.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.9e-27 124.4 60 100.0
Solyc08g061710.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.1e-25 118.2 60 95.0
Solyc11g019890.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.8e-25 117.9 59 94.9
Solyc11g061870.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.1e-25 116.7 59 93.2
Solyc11g061860.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.0e-24 115.9 59 93.2
Solyc11g061840.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-24 115.5 59 93.2
Solyc11g019860.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.0e-24 114.0 59 91.5
Solyc11g061830.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.0e-24 114.0 59 91.5
Solyc11g063710.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.0e-24 114.0 59 91.5
Solyc11g020520.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.8e-24 113.2 59 93.2
PGSC0003DMG400044693 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-23 111.7 59 89.8
Solyc11g063690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.6e-23 111.3 59 89.8
PGSC0003DMG400038901 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-23 111.3 59 89.8
Solyc08g061680.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.4e-23 110.9 59 88.1
Solyc11g063740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.4e-23 110.9 59 89.8
PGSC0003DMG400037617 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.5e-23 109.8 59 89.8
Solyc08g061750.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-21 105.5 55 92.7
PGSC0003DMG400040064 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.9e-21 105.1 59 86.4
Solyc08g061720.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.4e-21 104.8 54 92.6
CAN.G719.2 Capsicum annuum HOM05D000613 ORTHO05D000446 5.4e-21 103.6 59 81.4
PGSC0003DMG400041395 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.4e-21 103.6 59 84.7
Solyc08g061695.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-20 102.4 75 72.0
Solyc08g061755.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.7e-20 101.3 91 61.5
Solyc11g028210.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.7e-20 101.3 57 80.7
Solyc08g061780.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.6e-20 100.5 58 81.0
Nitab4.5_0008989g0060 Nicotiana tabacum HOM05D000613 ORTHO05D000446 6.6e-19 96.7 55 81.8
Solyc11g019880.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.6e-19 96.7 59 83.1
Solyc11g020380.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.6e-19 96.3 59 83.1
Solyc11g061900.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.6e-19 96.3 59 83.1
PGSC0003DMG400043528 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.1e-18 95.9 77 66.2
PGSC0003DMG400047106 Solanum tuberosum HOM05D000613 ORTHO05D000446 9.5e-18 92.8 78 62.8
Solyc11g020420.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-17 92.4 53 86.8
PGSC0003DMG400046352 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.2e-17 92.4 78 65.4
PGSC0003DMG400038336 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.6e-17 90.9 88 58.0
Solyc11g020390.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.7e-17 90.5 47 91.5
Solyc11g061920.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.7e-17 90.5 47 91.5
PGSC0003DMG400038470 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.7e-17 90.5 78 62.8
Solyc11g020400.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.2e-17 90.1 59 78.0
Solyc11g061810.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.2e-17 90.1 59 76.3
Solyc11g027933.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-16 89.4 73 64.4
Solyc08g061740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.8e-16 88.6 47 91.5
PGSC0003DMG400042147 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.8e-16 88.6 110 49.1
Solyc11g020370.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.0e-16 87.4 47 89.4
PGSC0003DMG400039644 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.9e-16 86.3 45 88.9
PGSC0003DMG400041401 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-15 84.0 60 71.7
Solyc11g150108.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.3e-14 82.4 144 39.6
PGSC0003DMG400039977 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.2e-14 81.6 105 47.6
Sopen11g010000 Solanum pennellii HOM05D000613 ORTHO05D000446 2.9e-14 81.3 144 38.9
Sopen11g009990 Solanum pennellii HOM05D000613 ORTHO05D000446 3.7e-14 80.9 144 38.9
Sopen11g023910 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-14 80.1 144 38.9
Solyc08g061690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.3e-14 79.7 59 69.5
Solyc11g018855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-13 79.3 144 38.9
Solyc11g020360.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-13 79.3 57 73.7
Solyc11g150109.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-13 79.3 144 38.9
Solyc11g020500.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.1e-13 77.4 57 71.9
PGSC0003DMG400039211 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-12 75.1 111 43.2
Actinidia23473 Actinidia chinensis HOM05D000613 ORTHO05D000446 3.5e-12 74.3 84 48.8
Nitab4.5_0011558g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 117 40.2
PGSC0003DMG400037106 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 144 36.8
PGSC0003DMG400038521 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 144 36.8
PGSC0003DMG400044956 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.5e-12 74.3 144 36.8
PGSC0003DMG400040479 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 144 36.8
PGSC0003DMG400044260 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 144 36.1
PGSC0003DMG400034473 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-11 72.4 103 42.7
GSVIVG01011107001 Vitis vinifera HOM05D000613 ORTHO05D000446 2.3e-11 71.6 92 42.4
Solyc11g020430.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.1e-11 70.5 47 76.6
PGSC0003DMG400046752 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.1e-11 70.5 144 35.4
PGSC0003DMG400035908 Solanum tuberosum HOM05D007862 ORTHO05D000446 1.1e-10 69.3 144 35.4
Sopen00g005920 Solanum pennellii HOM05D000613 ORTHO05D000446 2.5e-10 68.2 144 35.4
Solyc11g020365.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.3e-10 67.4 79 50.6
Solyc11g020507.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.3e-10 66.6 142 35.2
PGSC0003DMG400035835 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.3e-10 66.6 144 34.7
PGSC0003DMG400035440 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.6e-09 65.5 144 34.0
Sopen11g012830 Solanum pennellii HOM05D000004 ORTHO05D000002 2.1e-09 65.1 44 68.2
PGSC0003DMG400042932 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-09 65.1 144 32.6
Peaxi162Scf00016g00911 Petunia axillaris HOM05D000613 ORTHO05D000446 3.6e-09 64.3 144 32.6
Peaxi162Scf00016g00945 Petunia axillaris HOM05D000613 ORTHO05D000446 3.6e-09 64.3 144 32.6
Solyc11g061855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.6e-09 64.3 32 90.6
Sopen11g023930 Solanum pennellii HOM05D000613 ORTHO05D000446 3.6e-09 64.3 32 90.6
Sopen11g023700 Solanum pennellii HOM05D000004 ORTHO05D000002 4.7e-09 63.9 32 90.6
PGSC0003DMG400034593 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.1e-09 63.2 145 31.0
Sopen11g023710 Solanum pennellii HOM05D000613 ORTHO05D000002 1.1e-08 62.8 32 90.6
PGSC0003DMG400043272 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.1e-08 62.8 100 40.0
Thecc.04G221200 Theobroma cacao HOM05D000613 ORTHO05D000446 1.1e-08 62.8 118 33.9
Peaxi162Scf00209g00126 Petunia axillaris HOM05D000613 ORTHO05D000446 1.8e-08 62.0 144 31.9
PGSC0003DMG400045315 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.8e-08 62.0 56 62.5
Sopen04g016170 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-08 61.6 31 90.3
PGSC0003DMG400036132 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.3e-08 61.6 31 90.3
PGSC0003DMG400040894 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.3e-08 61.6 44 68.2
CAN.G133.4 Capsicum annuum HOM05D000613 ORTHO05D000446 3.1e-08 61.2 61 52.5
Solyc08g061790.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.0e-08 60.8 34 85.3
PGSC0003DMG400038123 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.0e-08 60.8 28 100.0
PGSC0003DMG400046917 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.0e-08 60.8 31 90.3
PGSC0003DMG400043900 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.2e-08 60.5 31 87.1
TAR628G1523 Trochodendron aralioides HOM05D000613 ORTHO05D000446 5.2e-08 60.5 144 28.5
Solyc11g028213.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.8e-08 60.1 113 35.4
Solyc11g061910.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.8e-08 60.1 29 93.1
PGSC0003DMG400045451 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.8e-08 60.1 31 87.1
Solyc11g030555.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.9e-08 59.7 64 46.9
Aa31LG11G10680 Aethionema arabicum HOM05D000613 ORTHO05D000446 1.2e-07 59.3 58 44.8
PGSC0003DMG400026805 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.2e-07 59.3 31 83.9
PGSC0003DMG400045199 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.2e-07 59.3 44 63.6
Solyc11g020437.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 32 84.4
Solyc11g150121.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 32 81.2
PGSC0003DMG400010282 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 31 83.9
PGSC0003DMG400036280 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 32 81.2
PGSC0003DMG400043341 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 32 78.1
PGSC0003DMG400046681 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 44 65.9
Dinv42090 Davidia involucrata HOM05D000613 ORTHO05D000446 2.0e-07 58.5 144 29.2
PGSC0003DMG400038422 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-07 58.5 54 53.7
PGSC0003DMG400040842 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-07 58.5 32 84.4
PGSC0003DMG400041074 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-07 58.5 44 63.6
CDE01G0397 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 2.6e-07 58.2 114 28.1
Psat3g125240 Pisum sativum HOM05D000613 ORTHO05D000446 3.4e-07 57.8 105 32.4
PGSC0003DMG400036530 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.4e-07 57.8 32 81.2
PGSC0003DMG400036656 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.4e-07 57.8 44 65.9
PGSC0003DMG400037166 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.4e-07 57.8 32 84.4
PGSC0003DMG400036951 Solanum tuberosum HOM05D000613 ORTHO05D018136 4.4e-07 57.4 36 72.2
PGSC0003DMG400040027 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 31 83.9
PGSC0003DMG400040261 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 32 81.2
PGSC0003DMG400042401 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 27 96.3
Oeu047880.1 Olea europaea HOM05D000613 ORTHO05D000446 5.8e-07 57.0 32 71.9
PGSC0003DMG400037891 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.8e-07 57.0 32 81.2
Aqoxy4G00843 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 9.9e-07 56.2 32 75.0
Aqoxy4G00845 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 9.9e-07 56.2 32 75.0
Oeu010297.1 Olea europaea HOM05D000613 ORTHO05D000446 9.9e-07 56.2 32 71.9
Solyc11g061790.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.3e-06 55.8 29 86.2
PGSC0003DMG400034585 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-06 55.8 32 81.2
PGSC0003DMG400037610 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.3e-06 55.8 32 78.1
TAR365G0724 Trochodendron aralioides HOM05D000613 ORTHO05D000446 1.3e-06 55.8 32 75.0
TAR636G2979 Trochodendron aralioides HOM05D000613 ORTHO05D000446 1.3e-06 55.8 144 29.9
Atru.chr4.2603 Acer truncatum HOM05D000613 ORTHO05D000446 1.7e-06 55.5 33 69.7
Thhalv10015859m.g Eutrema salsugineum HOM05D000613 ORTHO05D000446 1.7e-06 55.5 58 46.6
PGSC0003DMG400041388 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.7e-06 55.5 32 84.4
HPP92_011815 Vanilla planifolia HOM05D000613 ORTHO05D000446 1.7e-06 55.5 32 71.9
A02p05170 Brassica napus HOM05D000613 ORTHO05D000446 2.2e-06 55.1 58 44.8
BraA02t05477Z Brassica rapa HOM05D000613 ORTHO05D000446 2.2e-06 55.1 58 44.8
CARHR193950 Cardamine hirsuta HOM05D000613 ORTHO05D000446 2.2e-06 55.1 58 44.8
PGR044G1802 Punica granatum HOM05D000613 ORTHO05D000446 2.2e-06 55.1 32 71.9
Actinidia25366 Actinidia chinensis HOM05D000613 ORTHO05D000446 2.9e-06 54.7 32 75.0
Actinidia40193 Actinidia chinensis HOM05D000613 ORTHO05D000446 2.9e-06 54.7 143 28.7
Aqoxy2G03260 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 2.9e-06 54.7 32 68.8
Oeu060374.1 Olea europaea HOM05D000613 ORTHO05D000446 2.9e-06 54.7 32 68.8
Sp6g25340 Schrenkiella parvula HOM05D000613 ORTHO05D000446 2.9e-06 54.7 58 46.6
PGSC0003DMG400040970 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.9e-06 54.7 28 89.3
vmacro08273 Vaccinium macrocarpon HOM05D000613 ORTHO05D000446 2.9e-06 54.7 143 28.7
Atru.chr4.2579 Acer truncatum HOM05D000613 ORTHO05D000446 3.7e-06 54.3 33 66.7
CiPaw.01G159700 Carya illinoinensis HOM05D000613 ORTHO05D000446 3.7e-06 54.3 143 28.7
MBI17_g12010_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 3.7e-06 54.3 32 68.8
HPP92_027824 Vanilla planifolia HOM05D000613 ORTHO05D000446 3.7e-06 54.3 32 75.0
A10p20650 Brassica napus HOM05D000613 ORTHO05D000446 4.9e-06 53.9 58 43.1
BraA10t44128Z Brassica rapa HOM05D000613 ORTHO05D000446 4.9e-06 53.9 58 43.1
CAN.G869.14 Capsicum annuum HOM05D000613 ORTHO05D000446 4.9e-06 53.9 32 75.0
CDE02G1394 Ceratophyllum demersum HOM05D000613 ORTHO05D000446 4.9e-06 53.9 144 28.5
Lsat_1_v5_gn_4_15981 Lactuca sativa HOM05D000613 ORTHO05D000446 4.9e-06 53.9 60 45.0
Nn4g26190 Nelumbo nucifera HOM05D000613 ORTHO05D000446 4.9e-06 53.9 143 27.3
PGSC0003DMG400042885 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.9e-06 53.9 31 80.6
EL10Ac3g06345 Beta vulgaris HOM05D000613 ORTHO05D000446 6.4e-06 53.5 32 71.9
C02p10260 Brassica napus HOM05D000613 ORTHO05D000446 6.4e-06 53.5 58 44.8
Lj5A200T61 Lonicera japonica HOM05D000613 ORTHO05D000446 6.4e-06 53.5 142 29.6
Manes.01G209100 Manihot esculenta HOM05D000613 ORTHO05D000446 6.4e-06 53.5 144 27.8
Rhsim13G0023400 Rhododendron simsii HOM05D000613 ORTHO05D000446 6.4e-06 53.5 51 54.9
Sed0011696 Sechium edule HOM05D000613 ORTHO05D000446 6.4e-06 53.5 32 65.6
PGSC0003DMG400039457 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 31 80.6
PGSC0003DMG400041859 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.4e-06 53.5 29 86.2
Thecc.01G282600 Theobroma cacao HOM05D000613 ORTHO05D000446 6.4e-06 53.5 32 68.8
TAR362G0655 Trochodendron aralioides HOM05D000613 ORTHO05D000446 6.4e-06 53.5 33 69.7
Carub.0006s1736 Capsella rubella HOM05D000613 ORTHO05D000446 8.4e-06 53.1 58 44.8
Manes.05G074300 Manihot esculenta HOM05D000613 ORTHO05D000446 8.4e-06 53.1 144 27.8
Prupe.8G243600 Prunus persica HOM05D000613 ORTHO05D000446 8.4e-06 53.1 144 27.8
Solyc11g061890.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.4e-06 53.1 37 75.7


User provided reference genes

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