Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020420.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.5e-27 123.2 59 100.0
Solyc11g019890.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.9e-19 97.8 53 90.6
Solyc08g061750.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.8e-19 97.4 58 82.8
Solyc08g061710.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.5e-19 96.3 53 88.7
PGSC0003DMG400044693 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.4e-18 95.5 53 86.8
Solyc11g061870.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.9e-18 95.1 53 86.8
Solyc08g061720.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.2e-18 94.4 53 86.8
Solyc11g061860.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.2e-18 94.4 53 86.8
Solyc11g063740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.2e-18 94.4 53 86.8
PGSC0003DMG400040064 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.2e-18 94.4 53 88.7
Solyc11g061840.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.2e-18 94.0 53 86.8
PGSC0003DMG400037617 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.2e-18 94.0 53 88.7
PGSC0003DMG400041395 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.5e-18 93.6 53 86.8
Solyc11g019860.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.2e-18 93.2 53 86.8
Solyc11g061830.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-17 92.4 53 84.9
Solyc11g063710.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.2e-17 92.4 53 84.9
Solyc08g061680.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.6e-17 92.0 53 84.9
Solyc11g020510.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.6e-17 92.0 53 86.8
Solyc11g061920.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.9e-17 89.7 47 91.5
Solyc11g063690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.9e-17 89.7 53 83.0
Solyc11g020520.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.0e-16 89.4 53 84.9
Solyc08g061740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.3e-16 88.2 47 91.5
Solyc11g020390.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.0e-16 87.8 47 89.4
PGSC0003DMG400039644 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.8e-16 86.3 45 88.9
CAN.G719.2 Capsicum annuum HOM05D000613 ORTHO05D000446 1.1e-15 85.9 53 77.4
PGSC0003DMG400038901 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.3e-15 84.0 53 79.2
Solyc08g061695.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.7e-15 83.6 69 66.7
Solyc11g020370.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.7e-15 83.6 47 85.1
PGSC0003DMG400043528 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.7e-15 83.6 72 62.5
Solyc11g028210.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.3e-14 80.1 53 73.6
Solyc08g061755.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 8.2e-14 79.7 85 55.3
Solyc11g019880.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-13 79.0 53 79.2
Solyc08g061780.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.4e-13 78.2 52 73.1
Solyc11g020380.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.1e-13 77.4 53 77.4
Solyc11g061900.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.1e-13 77.4 53 77.4
PGSC0003DMG400038336 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.1e-13 77.4 80 56.2
PGSC0003DMG400046352 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.1e-13 77.4 72 62.5
Solyc11g027933.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.3e-13 77.0 67 62.7
PGSC0003DMG400047106 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-12 75.5 72 58.3
Nitab4.5_0008989g0060 Nicotiana tabacum HOM05D000613 ORTHO05D000446 5.9e-12 73.6 49 73.5
Solyc11g020400.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.9e-12 73.6 53 73.6
PGSC0003DMG400038470 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.7e-12 73.2 72 58.3
Solyc11g061810.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 53 71.7
PGSC0003DMG400042147 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-11 72.8 104 46.2
Solyc11g020430.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.2e-10 67.4 47 74.5
PGSC0003DMG400039977 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-09 65.1 99 43.4
PGSC0003DMG400041401 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-09 65.1 53 66.0
Solyc11g020360.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.6e-09 64.3 53 67.9
Solyc11g020365.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.6e-09 64.3 79 49.4
Solyc08g061690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-08 62.4 50 66.0
Solyc11g020500.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.4e-08 62.4 53 66.0
PGSC0003DMG400042401 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.3e-08 61.6 116 37.1
PGSC0003DMG400042932 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.0e-08 61.2 44 68.2
Solyc11g018855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.9e-08 60.8 44 68.2
Solyc11g150108.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.9e-08 60.8 44 68.2
Solyc11g150109.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.9e-08 60.8 44 68.2
Sopen04g016170 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-08 60.8 44 68.2
Sopen11g010000 Solanum pennellii HOM05D000613 ORTHO05D000446 3.9e-08 60.8 44 68.2
PGSC0003DMG400039211 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.1e-08 60.5 105 41.0
PGSC0003DMG400044956 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.8e-08 59.7 46 63.0
Sopen11g009990 Solanum pennellii HOM05D000613 ORTHO05D000446 1.1e-07 59.3 44 65.9
PGSC0003DMG400038521 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 44 65.9
PGSC0003DMG400040479 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.5e-07 58.9 44 65.9
Solyc08g061790.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.0e-07 58.5 34 82.4
Sopen11g023910 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-07 58.5 44 65.9
PGSC0003DMG400026805 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.0e-07 58.5 44 63.6
PGSC0003DMG400010282 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-07 58.2 44 63.6
PGSC0003DMG400038123 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-07 58.2 44 68.2
PGSC0003DMG400043900 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.6e-07 58.2 44 65.9
PGSC0003DMG400037106 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.3e-07 57.8 44 63.6
Nitab4.5_0011558g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 111 36.0
PGSC0003DMG400034473 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 44 63.6
PGSC0003DMG400038422 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 133 33.8
PGSC0003DMG400040894 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.4e-07 57.4 44 63.6
PGSC0003DMG400044260 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.7e-07 57.0 138 33.3
PGSC0003DMG400045199 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.7e-07 57.0 47 55.3
Actinidia23473 Actinidia chinensis HOM05D000613 ORTHO05D000446 7.4e-07 56.6 78 43.6
PGSC0003DMG400045315 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.4e-07 56.6 56 58.9
PGSC0003DMG400036132 Solanum tuberosum HOM05D000613 ORTHO05D000446 9.7e-07 56.2 31 83.9
GSVIVG01011107001 Vitis vinifera HOM05D000613 ORTHO05D000446 9.7e-07 56.2 86 38.4
PGSC0003DMG400036280 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.7e-06 55.5 32 78.1
PGSC0003DMG400043341 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.7e-06 55.5 44 59.1
Solyc11g061910.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.8e-06 54.7 29 86.2
PGSC0003DMG400046681 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.8e-06 54.7 44 61.4
PGSC0003DMG400046752 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.8e-06 54.7 31 80.6
PGSC0003DMG400036656 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.7e-06 54.3 46 58.7
PGSC0003DMG400041074 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.7e-06 54.3 44 59.1
Dinv32954 Davidia involucrata HOM05D000613 ORTHO05D000446 4.8e-06 53.9 46 58.7
Solyc11g020507.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.3e-06 53.5 41 63.4
Gohir.A08G222900 Gossypium hirsutum HOM05D000613 ORTHO05D000446 8.2e-06 53.1 52 46.2
PGSC0003DMG400035440 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.2e-06 53.1 26 92.3


User provided reference genes

Program Settings