Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g020367.1 Solanum lycopersicum HOM05D042016 ORTHO05D000446 2.5e-36 154.8 74 100.0
Solyc11g063690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-15 86.3 83 56.6
Solyc11g063710.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.1e-15 86.3 83 56.6
Sopen11g009990 Solanum pennellii HOM05D000613 ORTHO05D000446 1.1e-15 86.3 83 55.4
Solyc11g061810.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.2e-15 84.7 83 56.6
Solyc08g061690.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.4e-15 84.0 83 56.6
Solyc11g061830.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.4e-15 84.0 83 54.2
Solyc11g061900.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.4e-15 84.0 83 54.2
Solyc11g020507.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.1e-15 83.6 83 53.0
Solyc11g018855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 9.3e-15 83.2 83 54.2
Solyc11g063740.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 9.3e-15 83.2 83 55.4
Solyc11g150109.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 9.3e-15 83.2 83 54.2
Solyc11g150125.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.6e-14 82.4 82 52.4
Solyc11g020380.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.1e-14 82.0 83 53.0
Solyc11g061870.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.1e-14 82.0 83 54.2
Solyc08g061755.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 2.7e-14 81.6 83 54.2
Solyc11g019860.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.5e-14 81.3 82 52.4
PGSC0003DMG400041395 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.0e-14 80.5 83 51.8
Solyc08g061695.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 7.9e-14 80.1 83 54.2
PGSC0003DMG400037166 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-13 79.7 83 51.8
PGSC0003DMG400043062 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.0e-13 79.7 83 53.0
Solyc08g061680.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.8e-13 79.0 83 51.8
PGSC0003DMG400035881 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.8e-13 79.0 83 51.8
PGSC0003DMG400038422 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.8e-13 79.0 83 51.8
PGSC0003DMG400039977 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.3e-13 78.6 83 53.0
Solyc11g019890.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 3.0e-13 78.2 83 51.8
PGSC0003DMG400037106 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.9e-13 77.8 83 51.8
Solyc11g061855.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.1e-13 77.4 83 50.6
PGSC0003DMG400039644 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.1e-13 77.4 83 50.6
PGSC0003DMG400040842 Solanum tuberosum HOM05D000613 ORTHO05D000446 5.1e-13 77.4 83 50.6
PGSC0003DMG400040261 Solanum tuberosum HOM05D000613 ORTHO05D000446 6.7e-13 77.0 83 48.2
PGSC0003DMG400040479 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.7e-13 76.6 83 50.6
Solyc11g061785.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 9.6e-12 73.2 73 58.9
PGSC0003DMG400035835 Solanum tuberosum HOM05D000613 ORTHO05D000446 9.6e-12 73.2 83 51.8
PGSC0003DMG400041388 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.8e-11 71.6 83 49.4
PGSC0003DMG400039211 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.1e-11 70.1 83 48.2
PGSC0003DMG400046917 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.1e-10 69.7 83 48.2
PGSC0003DMG400026772 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.4e-10 69.3 83 47.0
PGSC0003DMG400045451 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.4e-10 68.6 82 46.3
Solyc11g020437.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 5.3e-10 67.4 80 46.2
Sopen00g005920 Solanum pennellii HOM05D000613 ORTHO05D000446 9.0e-10 66.6 75 52.0
Solyc11g150121.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.5e-09 64.3 82 45.1
PGSC0003DMG400046019 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.5e-09 64.3 83 48.2
Solyc11g028213.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.9e-08 60.8 73 49.3
PGSC0003DMG400039889 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.9e-08 60.8 83 39.8
PGSC0003DMG400044956 Solanum tuberosum HOM05D000613 ORTHO05D000446 8.4e-08 60.1 74 44.6
Sopen11g023700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 59.3 53 62.3
PGSC0003DMG400045315 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.4e-07 59.3 72 47.2
PGSC0003DMG400038470 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.9e-07 58.9 83 41.0
PGSC0003DMG400044453 Solanum tuberosum HOM05D000613 ORTHO05D000446 1.9e-07 58.9 83 41.0
PGSC0003DMG400045608 Solanum tuberosum HOM05D000613 ORTHO05D000446 3.2e-07 58.2 72 44.4
Sopen11g010000 Solanum pennellii HOM05D000613 ORTHO05D000446 5.5e-07 57.4 37 78.4
PGSC0003DMG400037891 Solanum tuberosum HOM05D000613 ORTHO05D000446 7.1e-07 57.0 75 42.7
Solyc11g061840.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 1.6e-06 55.8 37 78.4
PGSC0003DMG400036656 Solanum tuberosum HOM05D000613 ORTHO05D000446 2.1e-06 55.5 73 49.3
Sopen11g023930 Solanum pennellii HOM05D000613 ORTHO05D000446 2.7e-06 55.1 51 58.8
Solyc11g020503.1 Solanum lycopersicum HOM05D042016 ORTHO05D391363 3.5e-06 54.7 36 75.0
Solyc11g020363.1 Solanum lycopersicum HOM05D042016 ORTHO05D390419 6.0e-06 53.9 36 72.2
Solyc11g061860.1 Solanum lycopersicum HOM05D000613 ORTHO05D000446 6.0e-06 53.9 37 75.7


User provided reference genes

Program Settings