Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g018470.3 Solanum lycopersicum HOM05D005772 ORTHO05D006468 6.1e-89 330.9 175 100.0
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 2.9e-67 258.8 175 85.1
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.0e-39 166.4 164 64.6
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.0e-32 144.1 182 56.0
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 7.3e-26 121.3 177 45.8
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.5e-23 113.6 190 45.3
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 1.5e-23 113.6 190 45.3
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.4e-23 112.1 177 41.2
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 2.2e-22 109.8 177 42.9
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 1.2e-20 104.0 176 39.8
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.0e-19 100.9 174 40.2
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.9e-18 96.7 180 39.4
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 3.3e-18 95.9 175 42.3
Rhsim06G0101700 Rhododendron simsii HOM05D005772 ORTHO05D006468 7.3e-18 94.7 172 39.5
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.2e-17 94.0 173 38.2
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 1.2e-17 94.0 189 38.1
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.6e-17 93.6 177 38.4
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 1.8e-16 90.1 131 48.1
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 1.5e-15 87.0 189 39.2
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.0e-15 86.7 173 36.4
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 5.8e-15 85.1 173 36.4
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 7.6e-15 84.7 185 35.7
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 7.6e-15 84.7 189 35.4
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.7e-14 82.4 173 35.8
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 6.4e-14 81.6 176 36.4
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 8.4e-14 81.3 179 39.7
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.2e-13 79.3 188 37.2
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 4.1e-13 79.0 186 37.1
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 7.1e-13 78.2 180 33.9
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 1.2e-12 77.4 180 38.9
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.0e-11 74.3 180 35.0
Lsat_1_v5_gn_8_150021 Lactuca sativa HOM05D041600 ORTHO05D006468 1.7e-11 73.6 168 35.7
Peaxi162Scf00310g00057 Petunia axillaris HOM05D005772 ORTHO05D006468 3.0e-11 72.8 83 51.8
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.9e-11 72.4 178 34.8
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.9e-11 72.4 190 34.7
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 8.6e-11 71.2 135 37.0
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 2.5e-10 69.7 187 33.7
Sabra05G0136400 Salix brachista HOM05D005772 ORTHO05D006468 2.5e-10 69.7 170 33.5
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 3.3e-10 69.3 171 32.7
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 7.3e-10 68.2 191 33.5
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 9.6e-10 67.8 177 33.9
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 1.6e-09 67.0 118 41.5
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 2.1e-09 66.6 162 37.0
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 2.1e-09 66.6 191 31.9
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 1.1e-08 64.3 183 32.8
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.4e-08 63.9 167 34.7
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 3.1e-08 62.8 192 29.7
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 4.0e-08 62.4 200 29.0
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 4.0e-08 62.4 202 30.7
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 4.0e-08 62.4 124 37.9
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 8.9e-08 61.2 147 35.4
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.2e-07 60.8 154 35.7
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 1.2e-07 60.8 180 33.9
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 2.6e-07 59.7 154 34.4
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.3e-06 57.4 163 35.6
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.7e-06 57.0 142 34.5
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 1.7e-06 57.0 150 34.7
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 1.7e-06 57.0 162 34.0
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 2.2e-06 56.6 178 34.3
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.2e-06 56.6 125 37.6
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.9e-06 56.2 121 43.8
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 4.9e-06 55.5 185 30.8
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 4.9e-06 55.5 180 32.8
Sed0012770 Sechium edule HOM05D005772 ORTHO05D006468 8.4e-06 54.7 182 30.2


User provided reference genes

Program Settings