Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g017410.1 Solanum lycopersicum HOM05D011855 ORTHO05D011609 7.8e-172 607.1 312 100.0
Sopen11g009360 Solanum pennellii HOM05D011855 ORTHO05D011609 2.2e-150 535.8 286 97.2
PGSC0003DMG400009225 Solanum tuberosum HOM05D011855 ORTHO05D011609 3.9e-139 498.4 286 91.6
CAN.G370.24 Capsicum annuum HOM05D011855 ORTHO05D011609 4.2e-109 398.7 281 76.9
Nitab4.5_0000560g0170 Nicotiana tabacum HOM05D011855 ORTHO05D011609 1.0e-102 377.5 316 67.4
CAN.G1530.2 Capsicum annuum HOM05D011855 ORTHO05D011609 1.2e-47 194.5 285 46.3
Nitab4.5_0000422g0050 Nicotiana tabacum HOM05D011855 ORTHO05D011609 3.8e-33 146.4 141 60.3
Thecc.08G181900 Theobroma cacao HOM05D011855 ORTHO05D011609 1.6e-23 114.4 332 30.7
Potri.013G113800 Populus trichocarpa HOM05D012719 ORTHO05D011609 2.1e-23 114.0 327 28.4
Haze_17923 Corylus avellana HOM05D012719 ORTHO05D011609 6.0e-23 112.5 332 29.2
Potri.019G084400 Populus trichocarpa HOM05D012719 ORTHO05D011609 1.8e-22 110.9 304 32.2
Cfa018193 Carpinus fangiana HOM05D012719 ORTHO05D011609 2.3e-22 110.5 333 29.1
Haze_17921 Corylus avellana HOM05D004678 ORTHO05D005880 2.5e-21 107.1 313 28.4
Sc01g0001740 Simmondsia chinensis HOM05D011855 ORTHO05D011609 4.3e-21 106.3 324 29.0
Nn5g27743 Nelumbo nucifera HOM05D011855 ORTHO05D011609 3.7e-20 103.2 305 27.9
Ah.05g178050 Amaranthus hybridus HOM05D012719 ORTHO05D011609 2.4e-19 100.5 322 26.4
Dinv41697 Davidia involucrata HOM05D011855 ORTHO05D011609 2.4e-19 100.5 221 31.7
Cc10_g11370 Coffea canephora HOM05D011855 ORTHO05D011609 3.4e-18 96.7 256 32.4
COL.COLO4_19764 Corchorus olitorius HOM05D012719 ORTHO05D011609 4.6e-15 86.3 344 27.6
AUR62004652 Chenopodium quinoa HOM05D012719 ORTHO05D011609 7.9e-15 85.5 300 27.3
Peaxi162Scf00310g00618 Petunia axillaris HOM05D011855 ORTHO05D011609 1.8e-14 84.3 95 51.6
AUR62023571 Chenopodium quinoa HOM05D012719 ORTHO05D011609 5.1e-14 82.8 302 25.8
Cpa.g.sc66.50 Carica papaya HOM05D011855 ORTHO05D011609 2.2e-12 77.4 302 26.8
ATR0152G020 Amborella trichopoda HOM05D011855 ORTHO05D011609 3.7e-12 76.6 292 26.0
HPP92_016119 Vanilla planifolia HOM05D012719 ORTHO05D011609 4.8e-12 76.3 322 23.6
HPP92_011411 Vanilla planifolia HOM05D012719 ORTHO05D011609 2.0e-10 70.9 321 23.4
Oeu000110.1 Olea europaea HOM05D002421 ORTHO05D002560 9.3e-08 62.0 333 24.3
Gohir.A06G040100 Gossypium hirsutum HOM05D002421 ORTHO05D002560 3.6e-07 60.1 307 25.7
Gohir.D06G041100 Gossypium hirsutum HOM05D002421 ORTHO05D002560 7.9e-07 58.9 307 25.4
Actinidia00201 Actinidia chinensis HOM05D002421 ORTHO05D002560 1.0e-06 58.5 320 22.8
ECA240G4074 Erigeron canadensis HOM05D002421 ORTHO05D002560 1.0e-06 58.5 328 21.6
VMungo0251G2838 Vigna mungo HOM05D002421 ORTHO05D002560 1.0e-06 58.5 317 23.3
Glyma.08G127100 Glycine max HOM05D002421 ORTHO05D002560 1.8e-06 57.8 317 22.7
Gorai.010G045900 Gossypium raimondii HOM05D002421 ORTHO05D002560 1.8e-06 57.8 307 25.4
DCAR_025346 Daucus carota HOM05D002421 ORTHO05D002560 5.1e-06 56.2 327 23.2
HanXRQChr03g0065211 Helianthus annuus HOM05D002421 ORTHO05D002560 6.7e-06 55.8 319 21.3
TWI59G0213 Tripterygium wilfordii HOM05D002421 ORTHO05D002560 8.7e-06 55.5 324 23.1


User provided reference genes

Program Settings