Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 4.2e-78 294.7 153 100.0
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 6.5e-71 270.8 155 92.9
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 4.7e-69 264.6 153 91.5
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 2.2e-42 176.0 174 62.6
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 3.7e-42 175.3 191 58.6
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 7.3e-38 161.0 179 57.5
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 9.8e-19 97.4 149 45.6
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 1.2e-16 90.5 160 38.8
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 3.9e-15 85.5 142 43.0
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 9.5e-14 80.9 149 40.3
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 3.6e-13 79.0 161 36.6
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 5.2e-12 75.1 161 34.8
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 6.8e-12 74.7 159 37.7
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 8.9e-12 74.3 162 32.1
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 8.9e-12 74.3 162 32.1
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 8.9e-12 74.3 155 37.4
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 5.8e-11 71.6 153 34.0
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 5.8e-11 71.6 154 33.1
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 9.9e-11 70.9 152 36.8
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 9.9e-11 70.9 153 38.6
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 1.3e-10 70.5 153 39.9
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 1.3e-10 70.5 167 35.9
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.1e-09 67.4 152 31.6
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 1.1e-09 67.4 167 37.7
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 1.4e-09 67.0 153 36.6
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 1.4e-09 67.0 175 32.6
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.9e-09 66.6 171 34.5
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 2.4e-09 66.2 157 37.6
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 3.2e-09 65.9 157 36.3
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 5.4e-09 65.1 148 35.1
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 7.1e-09 64.7 167 31.7
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 9.2e-09 64.3 155 32.3
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 9.2e-09 64.3 154 37.0
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 1.2e-08 63.9 151 32.5
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 2.7e-08 62.8 151 34.4
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 3.5e-08 62.4 153 33.3
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 4.6e-08 62.0 164 36.0
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 6.0e-08 61.6 152 33.6
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 6.0e-08 61.6 167 32.3
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 1.3e-07 60.5 153 32.7
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 1.3e-07 60.5 171 30.4
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 1.3e-07 60.5 153 31.4
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.3e-07 60.5 168 33.3
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 3.9e-07 58.9 178 33.7
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 5.1e-07 58.5 167 32.9
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 6.6e-07 58.2 153 34.6
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 6.6e-07 58.2 149 33.6
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 8.6e-07 57.8 165 32.1
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 1.1e-06 57.4 158 33.5
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.1e-06 57.4 167 32.3
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 1.5e-06 57.0 153 33.3
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.5e-06 57.0 158 34.2
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.9e-06 56.6 158 33.5
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.5e-06 56.2 159 34.0
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 3.3e-06 55.8 155 29.7
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 3.3e-06 55.8 159 34.6
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 4.3e-06 55.5 155 30.3
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 4.3e-06 55.5 151 33.8
AL106U10030 Arabidopsis lyrata HOM05D010479 ORTHO05D007393 5.6e-06 55.1 104 38.5
FAN24G0793 Fragaria x ananassa HOM05D007935 ORTHO05D007393 5.6e-06 55.1 101 36.6
Duzib264G0789 Durio zibethinus HOM05D009958 ORTHO05D007393 7.3e-06 54.7 133 33.1
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 9.6e-06 54.3 100 40.0


User provided reference genes

Program Settings