Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g017105.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.0e-75 286.6 139 100.0
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 5.0e-38 161.4 116 69.8
Sopen05g013990 Solanum pennellii HOM05D000017 ORTHO05D009185 8.1e-36 154.1 116 65.5
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-34 150.2 97 76.3
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 2.1e-31 139.4 91 75.8
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 8.6e-30 134.0 86 75.6
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 3.3e-29 132.1 83 77.1
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-29 131.7 83 77.1
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-29 131.7 83 77.1
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-29 131.7 83 77.1
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-29 131.7 83 77.1
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.3e-29 131.7 83 77.1
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 5.6e-29 131.3 103 64.1
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 7.3e-29 131.0 83 77.1
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 9.5e-29 130.6 88 71.6
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 1.2e-28 130.2 83 75.9
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-28 130.2 83 75.9
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 2.1e-28 129.4 80 77.5
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 3.6e-28 128.6 83 74.7
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 4.7e-28 128.3 83 73.5
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-27 125.9 83 73.5
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.0e-27 125.2 83 72.3
PGSC0003DMG400029070 Solanum tuberosum HOM05D006921 ORTHO05D009185 1.2e-23 113.6 86 68.6
Solyc06g007395.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 1.2e-20 103.6 65 76.9
Sopen09g020850 Solanum pennellii HOM05D006921 ORTHO05D009185 1.4e-19 100.1 64 76.6
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 1.8e-19 99.8 91 51.6
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.4e-19 99.4 107 48.6
Peaxi162Scf00848g00013 Petunia axillaris HOM05D006921 ORTHO05D009185 8.9e-19 97.4 104 49.0
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.2e-18 97.1 124 42.7
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.4e-18 95.5 112 44.6
Nitab4.5_0004688g0070 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.9e-16 89.7 104 47.1
Peaxi162Scf00288g01114 Petunia axillaris HOM05D006921 ORTHO05D009185 1.9e-16 89.7 95 50.5
Nitab4.5_0001977g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.4e-16 89.4 94 47.9
Sopen08g012180 Solanum pennellii HOM05D000002 ORTHO05D009185 3.2e-16 89.0 50 82.0
Peaxi162Scf00591g00515 Petunia axillaris HOM05D006921 ORTHO05D009185 5.4e-16 88.2 89 48.3
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.1e-16 87.8 103 43.7
Nitab4.5_0002244g0030 Nicotiana tabacum HOM05D006921 ORTHO05D009185 9.3e-16 87.4 96 47.9
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 9.3e-16 87.4 98 44.9
Sopen04g020440 Solanum pennellii HOM05D000017 ORTHO05D001349 1.6e-15 86.7 67 65.7
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 4.6e-15 85.1 98 43.9
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.8e-15 84.3 107 44.9
Solyc04g049897.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 3.0e-14 82.4 67 64.2
Nitab4.5_0002403g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.6e-14 81.3 76 52.6
Sopen01g015990 Solanum pennellii HOM05D000017 ORTHO05D009185 8.7e-14 80.9 62 62.9
Nitab4.5_0004599g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.1e-13 80.5 101 42.6
Nitab4.5_0000263g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.5e-13 79.3 75 52.0
Nitab4.5_0005003g0080 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.3e-13 77.8 78 48.7
Nitab4.5_0000804g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.1e-12 76.3 120 40.8
Nitab4.5_0007593g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.1e-12 76.3 90 42.2
Nitab4.5_0000104g0090 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.6e-12 75.5 79 50.6
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 4.8e-12 75.1 96 40.6
Nitab4.5_0007178g0020 Nicotiana tabacum HOM05D006921 ORTHO05D001349 8.1e-12 74.3 89 50.6
Nitab4.5_0000025g0440 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.8e-11 73.2 60 53.3
Peaxi162Scf00579g00618 Petunia axillaris HOM05D006921 ORTHO05D009185 1.8e-11 73.2 84 41.7
Nitab4.5_0002244g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.4e-11 72.8 71 56.3
Nitab4.5_0008198g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 3.1e-11 72.4 79 45.6
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 4.0e-11 72.0 112 38.4
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 9.0e-11 70.9 100 38.0
Nitab4.5_0000519g0420 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.2e-10 70.5 66 51.5
Peaxi162Scf00294g00624 Petunia axillaris HOM05D006921 ORTHO05D009185 5.8e-10 68.2 120 36.7
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 7.6e-10 67.8 112 36.6
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.9e-10 67.4 109 37.6
Nitab4.5_0001068g0130 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-09 67.0 60 51.7
Nitab4.5_0006440g0050 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.3e-09 67.0 61 52.5
Sopen12g025000 Solanum pennellii HOM05D000017 ORTHO05D000013 1.7e-09 66.6 83 47.0
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 2.2e-09 66.2 96 37.5
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.9e-09 65.9 112 36.6
Solyc09g042673.1 Solanum lycopersicum HOM05D000017 ORTHO05D001349 3.8e-09 65.5 94 44.7
Nitab4.5_0003688g0060 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.9e-09 65.1 68 48.5
Peaxi162Scf00258g00412 Petunia axillaris HOM05D006921 ORTHO05D009185 4.9e-09 65.1 64 46.9
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 8.4e-09 64.3 94 42.6
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.4e-08 63.5 78 42.3
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.9e-08 63.2 88 40.9
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 2.4e-08 62.8 110 34.5
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 3.2e-08 62.4 100 36.0
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 5.4e-08 61.6 113 36.3
Peaxi162Scf00282g00135 Petunia axillaris HOM05D006921 ORTHO05D009185 5.4e-08 61.6 55 49.1
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 9.3e-08 60.8 101 35.6
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.2e-07 60.5 105 39.0
Nitab4.5_0002898g0120 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.1e-07 59.7 100 37.0
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 2.1e-07 59.7 83 37.3
Nitab4.5_0001507g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.7e-07 59.3 67 49.3
Nitab4.5_0000113g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 4.6e-07 58.5 78 39.7
Nitab4.5_0000309g0360 Nicotiana tabacum HOM05D006921 ORTHO05D009185 6.0e-07 58.2 49 53.1
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 6.0e-07 58.2 99 35.4
Peaxi162Scf00691g00312 Petunia axillaris HOM05D006921 ORTHO05D009185 7.9e-07 57.8 92 34.8
Peaxi162Scf00704g00002 Petunia axillaris HOM05D006921 ORTHO05D009185 7.9e-07 57.8 55 47.3
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 7.9e-07 57.8 83 38.6
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 1.0e-06 57.4 112 32.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 1.0e-06 57.4 83 38.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-06 57.0 83 38.6
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.7e-06 56.6 72 43.1
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 1.7e-06 56.6 93 34.4
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.3e-06 56.2 107 35.5
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.3e-06 56.2 87 37.9
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-06 56.2 111 32.4
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 2.3e-06 56.2 112 33.0
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 2.3e-06 56.2 83 38.6
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 2.3e-06 56.2 86 39.5
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 3.0e-06 55.8 112 33.0
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 3.0e-06 55.8 112 33.0
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 3.0e-06 55.8 112 33.0
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.0e-06 55.8 83 38.6
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 55.8 83 38.6
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 3.0e-06 55.8 112 33.0
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 3.0e-06 55.8 83 38.6
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 55.8 82 40.2
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 3.0e-06 55.8 83 38.6
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.0e-06 55.8 83 38.6
PGSC0003DMG400029950 Solanum tuberosum HOM05D000017 ORTHO05D009185 3.0e-06 55.8 64 46.9
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 3.0e-06 55.8 85 41.2
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 3.9e-06 55.5 96 35.4
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 6.6e-06 54.7 97 32.0
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 6.6e-06 54.7 92 34.8
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 8.7e-06 54.3 83 38.6


User provided reference genes

Program Settings