Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013470.1 Solanum lycopersicum HOM05D000112 ORTHO05D005280 1.7e-151 539.7 340 100.0
Sopen11g008490 Solanum pennellii HOM05D000112 ORTHO05D005280 8.1e-114 414.5 283 98.6
Nitab4.5_0000051g0180 Nicotiana tabacum HOM05D000112 ORTHO05D005280 2.0e-72 276.9 287 56.8
Nitab4.5_0004737g0010 Nicotiana tabacum HOM05D000112 ORTHO05D005280 3.4e-72 276.2 287 56.8
Peaxi162Scf00662g00021 Petunia axillaris HOM05D000112 ORTHO05D005280 8.8e-68 261.5 286 54.9
CAN.G255.8 Capsicum annuum HOM05D000112 ORTHO05D005280 6.7e-60 235.3 287 51.9
CSS0030407 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D005280 1.5e-35 154.5 255 42.0
Lj4A547G41 Lonicera japonica HOM05D000112 ORTHO05D005280 7.7e-32 142.1 296 37.2
Manes.18G072400 Manihot esculenta HOM05D000112 ORTHO05D005280 1.0e-31 141.7 256 39.5
Lj4A576G36 Lonicera japonica HOM05D000112 ORTHO05D005280 1.7e-31 141.0 294 36.4
Dinv26727 Davidia involucrata HOM05D000112 ORTHO05D005280 2.9e-31 140.2 287 38.3
Rhsim11G0064700 Rhododendron simsii HOM05D000112 ORTHO05D005280 3.6e-29 133.3 261 38.3
QL07p008129 Quercus lobata HOM05D000002 ORTHO05D000001 1.8e-28 131.0 259 39.4
Cpa.g.sc49.122 Carica papaya HOM05D000112 ORTHO05D005280 3.0e-28 130.2 258 37.6
Haze_00537 Corylus avellana HOM05D000112 ORTHO05D005280 3.0e-28 130.2 289 36.7
QL12p035420 Quercus lobata HOM05D000112 ORTHO05D005280 4.0e-28 129.8 259 38.6
GSVIVG01008950001 Vitis vinifera HOM05D000112 ORTHO05D005280 4.0e-28 129.8 249 38.2
Actinidia02584 Actinidia chinensis HOM05D000112 ORTHO05D005280 5.2e-28 129.4 254 36.2
Cfa015951 Carpinus fangiana HOM05D000112 ORTHO05D005280 2.6e-27 127.1 258 38.4
Prupe.1G507000 Prunus persica HOM05D000112 ORTHO05D005280 2.6e-27 127.1 258 38.0
vmacro00786 Vaccinium macrocarpon HOM05D000112 ORTHO05D005280 9.8e-27 125.2 246 36.6
TAR624G0499 Trochodendron aralioides HOM05D000112 ORTHO05D005280 1.4e-25 121.3 259 37.1
Nn1g08508 Nelumbo nucifera HOM05D000112 ORTHO05D005280 2.4e-25 120.6 259 36.3
CiPaw.06G024100 Carya illinoinensis HOM05D000112 ORTHO05D005280 4.1e-25 119.8 257 37.4
TAR628G1075 Trochodendron aralioides HOM05D000112 ORTHO05D005280 5.4e-25 119.4 259 34.7
Thecc.08G115900 Theobroma cacao HOM05D000112 ORTHO05D005280 9.2e-25 118.6 258 36.8
Ciclev10000693m.g Citrus clementina HOM05D000112 ORTHO05D005280 2.0e-24 117.5 258 36.8
CSS0035424 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D005280 7.8e-24 115.5 253 36.0
MD00G1103900 Malus domestica HOM05D000112 ORTHO05D005280 1.7e-23 114.4 255 36.5
Duzib093G0658 Durio zibethinus HOM05D000112 ORTHO05D005280 3.0e-23 113.6 261 36.8
Duzib116G0352 Durio zibethinus HOM05D000112 ORTHO05D005280 1.1e-22 111.7 257 35.4
Hund16818 Selenicereus undatus HOM05D000112 ORTHO05D005280 1.5e-22 111.3 230 34.8
Actinidia03494 Actinidia chinensis HOM05D000112 ORTHO05D005280 5.6e-22 109.4 246 36.2
Lj1g0018828 Lotus japonicus HOM05D000112 ORTHO05D005280 5.6e-22 109.4 244 34.4
COL.COLO4_21812 Corchorus olitorius HOM05D000112 ORTHO05D005280 7.3e-22 109.0 254 35.4
CiPaw.05G230000 Carya illinoinensis HOM05D000112 ORTHO05D005280 9.5e-22 108.6 227 39.2
Oeu001996.1 Olea europaea HOM05D000112 ORTHO05D005280 9.5e-22 108.6 270 35.2
TPR.G32931 Trifolium pratense HOM05D000112 ORTHO05D005280 1.6e-21 107.8 255 32.2
DCAR_014788 Daucus carota HOM05D000112 ORTHO05D005280 3.6e-21 106.7 264 34.1
MD15G1359400 Malus domestica HOM05D000112 ORTHO05D005280 4.7e-21 106.3 263 37.3
Medtr3g073420 Medicago truncatula HOM05D000112 ORTHO05D005280 4.7e-21 106.3 254 33.1
Dinv27391 Davidia involucrata HOM05D002692 ORTHO05D005280 8.0e-21 105.5 127 52.0
Gohir.D05G233800 Gossypium hirsutum HOM05D000112 ORTHO05D005280 8.0e-21 105.5 256 34.0
Oeu039588.1 Olea europaea HOM05D000112 ORTHO05D005280 8.0e-21 105.5 264 35.6
MBI09_g12158_MAGBIO Magnolia biondii HOM05D000112 ORTHO05D005280 1.0e-20 105.1 254 34.3
Gohir.A06G040200 Gossypium hirsutum HOM05D000112 ORTHO05D005280 1.8e-20 104.4 274 34.3
Potri.005G171300 Populus trichocarpa HOM05D000112 ORTHO05D005280 1.8e-20 104.4 248 34.3
Actinidia29434 Actinidia chinensis HOM05D000112 ORTHO05D005280 2.3e-20 104.0 234 37.2
Gorai.010G046000 Gossypium raimondii HOM05D000112 ORTHO05D005280 2.3e-20 104.0 258 34.9
Psat5g135840 Pisum sativum HOM05D000112 ORTHO05D005280 4.0e-20 103.2 254 33.1
Glyma.04G254200 Glycine max HOM05D000112 ORTHO05D005280 5.2e-20 102.8 241 34.0
Duzib041G0594 Durio zibethinus HOM05D000112 ORTHO05D005280 6.8e-20 102.4 257 33.5
Gorai.009G241900 Gossypium raimondii HOM05D000112 ORTHO05D005280 6.8e-20 102.4 256 33.6
Gohir.A05G231300 Gossypium hirsutum HOM05D000112 ORTHO05D005280 8.9e-20 102.1 256 33.6
RcHm_v2.0_Chr7g0240691 Rosa chinensis HOM05D000112 ORTHO05D005280 8.9e-20 102.1 256 33.6
Sabra05G0128800 Salix brachista HOM05D000112 ORTHO05D005280 8.9e-20 102.1 245 31.8
Potri.002G089900 Populus trichocarpa HOM05D000112 ORTHO05D005280 2.6e-19 100.5 246 34.1
Gohir.D06G041200 Gossypium hirsutum HOM05D000112 ORTHO05D005280 9.8e-19 98.6 258 34.1
Ca_25765_v3 Cicer arietinum L. HOM05D000112 ORTHO05D005280 1.7e-18 97.8 263 33.5
VMungo0647G1442 Vigna mungo HOM05D000112 ORTHO05D005280 3.7e-18 96.7 260 34.2
Hma1.2p1_0251F.1_g102580 Hydrangea macrophylla HOM05D000112 ORTHO05D005280 4.9e-18 96.3 248 34.3
Lalb_Chr11g0065641 Lupinus albus HOM05D000112 ORTHO05D005280 1.1e-17 95.1 268 32.1
Sabra02G0070800 Salix brachista HOM05D000112 ORTHO05D005280 3.2e-17 93.6 248 31.9
MBI16_g07654_MAGBIO Magnolia biondii HOM05D000112 ORTHO05D005280 7.0e-17 92.4 246 31.3
Phvul.008G168700 Phaseolus vulgaris HOM05D000112 ORTHO05D005280 9.2e-17 92.0 261 33.7
Lalb_Chr23g0270791 Lupinus albus HOM05D000112 ORTHO05D005280 2.0e-16 90.9 231 32.5
arahy.Tifrunner.gnm1.ann1.35XBQI Arachis hypogaea HOM05D000112 ORTHO05D005280 6.0e-16 89.4 231 33.8
arahy.Tifrunner.gnm1.ann1.Q8HI94 Arachis hypogaea HOM05D000112 ORTHO05D005280 6.0e-16 89.4 231 33.8
Ah.16g109680 Amaranthus hybridus HOM05D000112 ORTHO05D005280 5.0e-15 86.3 243 30.0
Sc01g0001590 Simmondsia chinensis HOM05D000112 ORTHO05D005280 8.6e-15 85.5 226 35.0
FvH4_5g38770 Fragaria vesca HOM05D000112 ORTHO05D005280 1.1e-14 85.1 256 32.0
FAN18G2720 Fragaria x ananassa HOM05D000112 ORTHO05D005280 4.3e-14 83.2 239 32.6
FAN04G1771 Fragaria x ananassa HOM05D000112 ORTHO05D005280 9.5e-14 82.0 259 30.5
FAN13G1946 Fragaria x ananassa HOM05D000112 ORTHO05D005280 1.2e-13 81.6 259 30.5
Glyma.13G084700 Glycine max HOM05D000112 ORTHO05D005280 1.2e-13 81.6 227 32.6
EL10Ac1g00046 Beta vulgaris HOM05D000112 ORTHO05D005280 2.1e-13 80.9 229 31.9
FAN08G3471 Fragaria x ananassa HOM05D000112 ORTHO05D005280 1.4e-12 78.2 258 29.5
CARHR071330 Cardamine hirsuta HOM05D000112 ORTHO05D005280 1.8e-12 77.8 245 31.0
BcaC08g45448 Brassica carinata HOM05D000112 ORTHO05D005280 4.0e-12 76.6 258 30.6
C06p30760 Brassica napus HOM05D000112 ORTHO05D005280 4.0e-12 76.6 257 29.6
BolC6t38241H Brassica oleracea HOM05D000112 ORTHO05D005280 4.0e-12 76.6 257 29.6
THA.LOC104813638 Tarenaya hassleriana HOM05D000112 ORTHO05D005280 4.0e-12 76.6 259 29.3
Thhalv10018331m.g Eutrema salsugineum HOM05D000112 ORTHO05D005280 5.2e-12 76.3 246 30.9
Carub.0002s2474 Capsella rubella HOM05D000112 ORTHO05D005280 8.9e-12 75.5 246 32.1
Sp5g33010 Schrenkiella parvula HOM05D000112 ORTHO05D005280 1.2e-11 75.1 229 30.6
AUR62033846 Chenopodium quinoa HOM05D000112 ORTHO05D005280 2.0e-11 74.3 235 29.4
AUR62035452 Chenopodium quinoa HOM05D000112 ORTHO05D005280 2.0e-11 74.3 235 29.4
ClCG08G010910 Citrullus lanatus HOM05D000112 ORTHO05D005280 2.0e-11 74.3 233 33.0
PGR044G2358 Punica granatum HOM05D000112 ORTHO05D005280 2.0e-11 74.3 241 29.9
A07p27800 Brassica napus HOM05D000112 ORTHO05D005280 2.6e-11 73.9 259 30.1
BraA07t30419Z Brassica rapa HOM05D000112 ORTHO05D005280 2.6e-11 73.9 259 30.1
Phvul.009G026200 Phaseolus vulgaris HOM05D000112 ORTHO05D005280 5.8e-11 72.8 240 29.6
AT1G77850 Arabidopsis thaliana HOM05D000112 ORTHO05D005280 7.5e-11 72.4 232 31.9
AL2G38080 Arabidopsis lyrata HOM05D000112 ORTHO05D005280 2.2e-10 70.9 245 29.0
Eucgr.F04380 Eucalyptus grandis HOM05D000112 ORTHO05D005280 2.2e-10 70.9 237 30.0
AUR62039546 Chenopodium quinoa HOM05D000112 ORTHO05D005280 3.7e-10 70.1 254 28.7
TPR.G30418 Trifolium pratense HOM05D000112 ORTHO05D005280 3.7e-10 70.1 252 30.6
VMungo1309G2631 Vigna mungo HOM05D000112 ORTHO05D005280 3.7e-10 70.1 229 27.5
Glyma.14G166500 Glycine max HOM05D000112 ORTHO05D005280 4.9e-10 69.7 226 32.7
BcaB02g07135 Brassica carinata HOM05D000112 ORTHO05D005280 6.4e-10 69.3 246 28.9
CsaV3_1G023020 Cucumis sativus L. HOM05D000112 ORTHO05D005280 8.3e-10 68.9 257 31.1
FvH4_5g38690 Fragaria vesca HOM05D000112 ORTHO05D005280 1.9e-09 67.8 202 31.2
arahy.Tifrunner.gnm1.ann1.YSV1GS Arachis hypogaea HOM05D000112 ORTHO05D005280 5.4e-09 66.2 243 26.7
Atru.chr13.1308 Acer truncatum HOM05D000112 ORTHO05D005280 9.2e-09 65.5 152 32.2
DCAR_014278 Daucus carota HOM05D000112 ORTHO05D005280 1.6e-08 64.7 238 25.2
MELO3C011372.2 Cucumis melo HOM05D000112 ORTHO05D005280 4.6e-08 63.2 261 29.5
AUR62023601 Chenopodium quinoa HOM05D000112 ORTHO05D005280 6.0e-08 62.8 249 27.3
AUR62004685 Chenopodium quinoa HOM05D000112 ORTHO05D005280 2.3e-07 60.8 247 26.3
arahy.Tifrunner.gnm1.ann1.ZW7I7X Arachis hypogaea HOM05D000112 ORTHO05D005280 3.0e-07 60.5 246 27.6
FvH4_5g38640 Fragaria vesca HOM05D000112 ORTHO05D026260 3.9e-07 60.1 119 39.5
Sed0017908 Sechium edule HOM05D000112 ORTHO05D005280 3.9e-07 60.1 232 28.0
arahy.Tifrunner.gnm1.ann1.FTQ5UB Arachis hypogaea HOM05D000112 ORTHO05D005280 5.1e-07 59.7 230 26.5
arahy.Tifrunner.gnm1.ann1.ER65H4 Arachis hypogaea HOM05D000112 ORTHO05D005280 1.5e-06 58.2 246 26.8
arahy.Tifrunner.gnm1.ann1.UH60M2 Arachis hypogaea HOM05D000112 ORTHO05D005280 9.5e-06 55.5 246 26.4
arahy.Tifrunner.gnm1.ann1.W230FE Arachis hypogaea HOM05D000112 ORTHO05D005280 9.5e-06 55.5 246 26.0


User provided reference genes

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