Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 4.8e-48 194.1 96 100.0
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 3.9e-37 157.9 91 86.8
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.3e-29 132.9 90 73.3
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.5e-28 129.4 90 70.0
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 5.6e-28 127.5 91 68.1
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 7.3e-28 127.1 90 71.1
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.2e-27 126.3 86 72.1
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 1.6e-27 125.9 91 73.6
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 2.1e-27 125.6 91 67.0
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.8e-27 125.2 86 70.9
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 3.6e-27 124.8 90 68.9
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 4.7e-27 124.4 86 70.9
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 6.2e-27 124.0 80 77.5
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 6.2e-27 124.0 90 70.0
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 6.2e-27 124.0 90 68.9
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.1e-26 123.2 90 68.9
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 1.1e-26 123.2 90 70.0
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 1.1e-26 123.2 90 70.0
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 1.4e-26 122.9 90 70.0
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 1.4e-26 122.9 90 65.6
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 1.4e-26 122.9 90 70.0
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 1.8e-26 122.5 90 68.9
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 1.8e-26 122.5 90 68.9
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 1.8e-26 122.5 88 69.3
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 2.3e-26 122.1 90 65.6
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 2.3e-26 122.1 90 68.9
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 4.0e-26 121.3 87 65.5
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 4.0e-26 121.3 84 70.2
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 5.2e-26 120.9 90 67.8
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 6.8e-26 120.6 87 69.0
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 6.8e-26 120.6 80 71.2
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 6.8e-26 120.6 86 70.9
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 6.8e-26 120.6 86 70.9
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 6.8e-26 120.6 86 70.9
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 6.8e-26 120.6 90 65.6
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 6.8e-26 120.6 87 66.7
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 8.9e-26 120.2 91 65.9
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 8.9e-26 120.2 91 65.9
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 8.9e-26 120.2 90 68.9
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 8.9e-26 120.2 75 77.3
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 8.9e-26 120.2 90 65.6
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 1.2e-25 119.8 90 66.7
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.5e-25 119.4 90 67.8
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.5e-25 119.4 91 65.9
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 2.6e-25 118.6 80 71.2
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 2.6e-25 118.6 80 71.2
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 4.4e-25 117.9 90 66.7
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 4.4e-25 117.9 87 64.4
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 4.4e-25 117.9 71 77.5
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 5.8e-25 117.5 82 68.3
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 5.8e-25 117.5 79 75.9
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 5.8e-25 117.5 90 65.6
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 9.8e-25 116.7 82 72.0
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 9.8e-25 116.7 78 71.8
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 9.8e-25 116.7 80 68.8
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 9.8e-25 116.7 86 66.3
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.3e-24 116.3 80 68.8
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 1.7e-24 115.9 70 77.1
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 1.7e-24 115.9 86 65.1
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 2.2e-24 115.5 80 68.8
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 2.2e-24 115.5 83 65.1
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.9e-24 115.2 82 67.1
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 2.9e-24 115.2 82 67.1
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 2.9e-24 115.2 80 73.8
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 2.9e-24 115.2 80 73.8
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 3.7e-24 114.8 90 64.4
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 4.9e-24 114.4 86 65.1
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 8.3e-24 113.6 90 64.4
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 8.3e-24 113.6 80 72.5
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 8.3e-24 113.6 80 72.5
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 8.3e-24 113.6 88 63.6
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.1e-23 113.2 90 64.4
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 1.4e-23 112.8 90 65.6
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 1.9e-23 112.5 85 63.5
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 4.1e-23 111.3 86 64.0
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 4.1e-23 111.3 86 64.0
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 5.4e-23 110.9 86 64.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 5.4e-23 110.9 90 63.3
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 7.1e-23 110.5 84 61.9
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 9.2e-23 110.2 90 63.3
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.2e-22 109.8 90 63.3
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 1.6e-22 109.4 88 61.4
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.1e-22 109.0 73 69.9
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 2.1e-22 109.0 73 69.9
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 2.1e-22 109.0 84 61.9
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 2.7e-22 108.6 80 61.2
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 2.7e-22 108.6 62 83.9
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 2.7e-22 108.6 90 61.1
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 2.7e-22 108.6 73 67.1
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 3.5e-22 108.2 103 56.3
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 2.3e-21 105.5 61 83.6
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 3.9e-21 104.8 91 60.4
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 5.1e-21 104.4 72 69.4
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 1.1e-20 103.2 90 53.3
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.8e-19 98.6 106 50.9
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 5.2e-18 94.4 85 51.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.2e-17 93.2 74 55.4
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 9.9e-17 90.1 79 55.7
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 1.7e-16 89.4 72 58.3
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.7e-16 89.4 72 58.3
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.7e-16 88.2 72 56.9
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 3.7e-16 88.2 72 56.9
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 1.4e-15 86.3 61 60.7
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 2.1e-14 82.4 76 44.7
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 6.0e-14 80.9 67 53.7
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 3.3e-12 75.1 178 31.5
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.2e-10 67.8 67 49.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 7.8e-06 53.9 56 50.0


User provided reference genes

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