Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 8.5e-51 203.4 102 100.0
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 8.5e-51 203.4 102 100.0
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.0e-48 196.4 102 96.1
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 6.3e-46 187.2 102 93.1
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 4.1e-45 184.5 102 86.3
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 7.0e-45 183.7 102 89.2
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 7.0e-45 183.7 102 92.2
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 9.1e-45 183.3 102 87.3
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 9.1e-45 183.3 96 94.8
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 1.2e-44 183.0 102 91.2
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 1.2e-44 183.0 102 84.3
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.6e-44 182.6 102 84.3
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 2.6e-44 181.8 102 88.2
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 2.5e-42 175.3 104 83.7
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 2.5e-42 175.3 102 80.4
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.5e-42 175.3 103 87.4
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 3.2e-42 174.9 103 88.3
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 4.2e-42 174.5 104 86.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 7.2e-42 173.7 101 82.2
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 7.2e-42 173.7 102 85.3
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 2.7e-41 171.8 104 82.7
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 3.6e-41 171.4 95 85.3
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 3.6e-41 171.4 95 85.3
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.7e-41 171.0 103 83.5
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.7e-41 171.0 103 83.5
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 6.1e-41 170.6 102 83.3
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 6.1e-41 170.6 96 82.3
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 8.0e-41 170.2 103 84.5
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 5.2e-40 167.5 102 81.4
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.5e-39 166.0 103 81.6
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 1.5e-39 166.0 96 86.5
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 2.6e-39 165.2 96 82.3
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.3e-39 164.9 102 78.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 3.3e-39 164.9 103 83.5
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 5.7e-39 164.1 107 76.6
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.7e-39 164.1 103 84.5
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 1.3e-38 162.9 103 79.6
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.3e-38 162.9 105 81.9
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 1.7e-38 162.5 102 82.4
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 2.8e-38 161.8 101 79.2
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.1e-37 159.8 108 75.0
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 3.1e-37 158.3 110 74.5
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 4.1e-37 157.9 102 79.4
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 4.1e-37 157.9 102 79.4
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 5.3e-37 157.5 108 78.7
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 9.1e-37 156.8 101 79.2
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.2e-36 156.4 103 75.7
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.0e-36 155.6 102 78.4
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 2.7e-36 155.2 94 79.8
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.7e-36 155.2 98 79.6
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.0e-35 153.3 108 76.9
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 1.3e-35 152.9 101 73.3
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.7e-35 152.5 112 71.4
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.7e-35 152.5 112 71.4
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 3.8e-35 151.4 101 74.3
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 5.0e-35 151.0 91 80.2
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 6.5e-35 150.6 102 76.5
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 8.5e-35 150.2 101 75.2
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.1e-34 149.8 95 78.9
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.5e-34 149.4 85 87.1
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 3.2e-34 148.3 97 78.4
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.6e-33 146.0 103 71.8
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.1e-33 145.6 101 75.2
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 4.7e-33 144.4 113 69.9
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 8.0e-33 143.7 105 70.5
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.4e-32 142.9 106 74.5
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 3.0e-32 141.7 100 72.0
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 4.0e-32 141.4 109 71.6
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 4.0e-32 141.4 109 72.5
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.5e-31 139.4 105 68.6
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 1.5e-31 139.4 103 74.8
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 1.5e-31 139.4 103 74.8
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 2.0e-31 139.0 112 68.8
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 2.0e-31 139.0 108 72.2
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 2.6e-31 138.7 84 79.8
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 7.5e-31 137.1 105 65.7
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.3e-30 136.3 106 65.1
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 1.7e-30 136.0 109 66.1
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 2.8e-30 135.2 113 69.0
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 2.8e-30 135.2 113 69.0
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 2.8e-30 135.2 86 79.1
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 3.7e-30 134.8 114 68.4
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 6.3e-30 134.0 114 65.8
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 8.3e-30 133.7 94 72.3
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.1e-29 133.3 115 67.0
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 1.4e-29 132.9 111 66.7
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 2.4e-29 132.1 89 75.3
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 4.1e-29 131.3 111 65.8
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 5.4e-29 131.0 106 70.8
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 7.0e-29 130.6 111 66.7
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 7.0e-29 130.6 101 62.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 4.5e-28 127.9 116 62.1
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.3e-27 126.3 107 68.2
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.3e-27 126.3 107 68.2
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.7e-27 125.9 101 62.4
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 5.0e-27 124.4 64 95.3
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.9e-26 122.5 89 71.9
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 9.5e-26 120.2 110 63.6
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 1.2e-25 119.8 107 64.5
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.6e-25 119.4 106 64.2
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 1.6e-25 119.4 102 64.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 1.6e-25 119.4 114 57.9
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 3.6e-25 118.2 112 61.6
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.6e-25 118.2 109 62.4
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 4.7e-25 117.9 115 62.6
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 6.1e-25 117.5 86 72.1
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 8.0e-25 117.1 114 61.4
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 8.9e-24 113.6 113 58.4
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.1e-21 106.7 78 73.1
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.4e-21 106.3 94 61.7
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 1.8e-21 105.9 103 57.3
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 9.5e-18 93.6 57 86.0
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.0e-16 90.1 70 72.9
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 5.2e-16 87.8 86 61.6
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 2.0e-15 85.9 82 62.2
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 9.2e-13 77.0 50 76.0
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 1.2e-12 76.6 115 45.2
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 3.0e-11 72.0 107 46.7
DCAR_014111 Daucus carota HOM05D006768 ORTHO05D008436 9.5e-10 67.0 55 70.9
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 8.0e-09 63.9 106 39.6
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 8.9e-08 60.5 103 40.8


User provided reference genes

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