Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 1.7e-85 319.3 163 100.0
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 4.0e-79 298.1 163 90.8
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 1.7e-77 292.7 163 90.2
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 7.1e-76 287.3 163 88.3
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.3e-72 276.6 163 84.0
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 3.7e-72 275.0 163 82.8
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 2.4e-63 245.7 140 87.1
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 3.1e-55 218.8 159 66.7
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 7.7e-54 214.2 160 66.2
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 1.9e-52 209.5 160 61.9
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 2.5e-52 209.1 160 62.5
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 9.4e-52 207.2 160 64.4
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 2.7e-51 205.7 160 63.8
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 3.6e-51 205.3 160 63.1
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 8.0e-51 204.1 163 61.3
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 1.0e-50 203.8 164 62.2
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 1.4e-50 203.4 160 63.1
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.8e-50 203.0 163 60.1
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 5.2e-50 201.4 163 59.5
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 1.1e-49 200.3 163 60.1
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 2.0e-49 199.5 163 59.5
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 2.6e-49 199.1 163 58.3
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 4.4e-49 198.4 158 62.0
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 5.7e-49 198.0 163 58.3
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 9.7e-49 197.2 163 58.3
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 3.7e-48 195.3 162 58.0
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 6.3e-48 194.5 161 59.6
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 8.2e-48 194.1 160 58.8
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 1.4e-47 193.4 165 58.2
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 1.8e-47 193.0 160 60.0
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 1.2e-46 190.3 156 58.3
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 3.5e-46 188.7 162 59.9
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 4.5e-46 188.3 160 56.2
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 7.7e-46 187.6 160 55.6
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 1.3e-45 186.8 160 56.9
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 1.3e-45 186.8 160 55.6
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 1.3e-45 186.8 160 55.6
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 1.3e-45 186.8 160 58.8
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 1.3e-45 186.8 162 55.6
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 1.7e-45 186.4 163 54.6
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 1.5e-44 183.3 149 59.7
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 4.2e-44 181.8 163 57.1
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 5.5e-44 181.4 160 56.2
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 1.2e-43 180.3 163 58.9
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 1.6e-43 179.9 163 53.4
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 3.6e-43 178.7 156 56.4
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 3.6e-43 178.7 152 53.3
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 4.7e-43 178.3 163 53.4
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 4.7e-43 178.3 156 57.7
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 1.0e-42 177.2 160 52.5
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 1.0e-42 177.2 156 57.1
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.8e-42 176.4 150 57.3
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 2.3e-42 176.0 160 53.8
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 8.8e-42 174.1 146 56.8
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 2.0e-41 172.9 156 54.5
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 7.5e-41 171.0 160 55.0
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 2.2e-40 169.5 156 55.1
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 1.8e-39 166.4 154 51.3
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 2.4e-39 166.0 143 56.6
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 5.3e-39 164.9 160 53.8
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 1.2e-38 163.7 163 50.9
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 2.0e-38 162.9 156 52.6
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 2.0e-38 162.9 87 90.8
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 3.5e-38 162.2 163 50.9
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 3.5e-38 162.2 159 50.9
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 4.5e-38 161.8 163 51.5
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 4.5e-38 161.8 163 51.5
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 4.5e-38 161.8 156 52.6
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 5.9e-38 161.4 149 53.0
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 5.9e-38 161.4 149 53.0
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 5.9e-38 161.4 149 53.0
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 7.7e-38 161.0 163 50.3
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 1.0e-37 160.6 160 53.1
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 1.3e-37 160.2 163 51.5
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 1.7e-37 159.8 163 50.9
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 1.7e-37 159.8 163 50.9
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 1.7e-37 159.8 163 50.9
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 1.7e-37 159.8 159 51.6
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 2.2e-37 159.5 149 53.0
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 2.2e-37 159.5 149 53.0
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 2.2e-37 159.5 149 53.0
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 2.2e-37 159.5 90 83.3
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 3.8e-37 158.7 147 53.1
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 3.8e-37 158.7 147 53.1
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 3.8e-37 158.7 160 48.1
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 3.8e-37 158.7 152 53.9
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 5.0e-37 158.3 163 50.3
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 8.5e-37 157.5 146 53.4
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 8.5e-37 157.5 160 50.6
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.1e-36 157.1 158 51.3
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.1e-36 157.1 141 54.6
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 1.1e-36 157.1 163 50.3
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 1.1e-36 157.1 163 50.3
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 1.5e-36 156.8 149 52.3
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 1.5e-36 156.8 149 51.7
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.9e-36 156.4 163 50.3
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 1.9e-36 156.4 163 50.3
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 3.2e-36 155.6 147 51.7
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 5.5e-36 154.8 140 54.3
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 7.2e-36 154.5 141 53.9
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 9.4e-36 154.1 140 54.3
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 1.2e-35 153.7 156 50.6
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 1.6e-35 153.3 149 51.0
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 6.1e-35 151.4 156 50.6
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 1.0e-34 150.6 87 83.9
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 1.4e-34 150.2 163 47.9
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 2.3e-34 149.4 141 54.6
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 3.0e-34 149.1 164 43.9
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 2.6e-33 146.0 149 49.7
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 3.1e-31 139.0 163 43.6
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 3.1e-31 139.0 163 44.2
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 2.3e-29 132.9 146 47.9
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 5.2e-26 121.7 145 46.2
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 2.0e-25 119.8 114 50.9
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 2.0e-25 119.8 167 41.3
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 9.8e-25 117.5 166 39.2
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 2.2e-24 116.3 89 58.4
Nitab4.5_0000188g0370 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.4e-23 113.6 125 53.6
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 1.3e-21 107.1 141 40.4
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 8.6e-21 104.4 153 35.9
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 1.6e-19 100.1 148 37.2
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 3.1e-18 95.9 146 37.7
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 1.1e-15 87.4 208 33.2
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 7.0e-15 84.7 44 97.7
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 6.6e-13 78.2 70 57.1
Mapoly0072s0017 Marchantia polymorpha HOM05D004825 ORTHO05D005415 7.1e-07 58.2 146 24.7


User provided reference genes

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