Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 4.4e-71 271.2 134 100.0
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 7.0e-69 263.8 134 98.5
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 2.6e-68 261.9 134 97.8
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 4.1e-61 238.0 133 88.7
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 2.7e-57 225.3 133 85.0
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 7.7e-52 207.2 130 82.3
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 1.4e-45 186.4 133 72.9
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 9.1e-45 183.7 133 72.9
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.1e-37 160.2 141 64.5
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 5.4e-37 157.9 149 58.4
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 5.9e-36 154.5 147 59.9
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 1.0e-35 153.7 141 61.0
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 1.3e-35 153.3 145 60.0
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 3.9e-35 151.8 133 60.9
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 5.0e-35 151.4 135 60.7
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 3.6e-33 145.2 133 60.9
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 6.2e-33 144.4 133 59.4
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 6.2e-33 144.4 131 61.8
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 8.0e-33 144.1 147 55.1
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 8.0e-33 144.1 131 61.8
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 1.4e-32 143.3 142 57.7
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.8e-32 142.9 138 57.2
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 1.8e-32 142.9 133 59.4
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 3.1e-32 142.1 133 59.4
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 5.2e-32 141.4 139 54.7
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 6.8e-32 141.0 121 61.2
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 1.2e-31 140.2 131 58.8
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 1.2e-31 140.2 133 58.6
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 1.5e-31 139.8 123 60.2
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 1.5e-31 139.8 128 60.2
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.0e-31 139.4 129 58.1
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 5.8e-31 137.9 130 56.2
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 5.8e-31 137.9 133 57.9
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 5.8e-31 137.9 124 59.7
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 5.8e-31 137.9 134 56.0
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 7.5e-31 137.5 133 57.9
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 1.3e-30 136.7 129 57.4
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 1.7e-30 136.3 130 52.3
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 1.7e-30 136.3 136 53.7
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.7e-30 136.3 132 54.5
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 2.2e-30 136.0 140 55.7
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 2.2e-30 136.0 138 56.5
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 2.9e-30 135.6 127 59.1
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 3.7e-30 135.2 131 56.5
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 6.4e-30 134.4 138 55.8
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 8.3e-30 134.0 125 58.4
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 1.1e-29 133.7 129 57.4
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 1.1e-29 133.7 140 52.9
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 1.4e-29 133.3 130 57.7
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 1.4e-29 133.3 128 56.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 2.4e-29 132.5 133 54.9
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 2.4e-29 132.5 133 54.9
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 3.2e-29 132.1 122 55.7
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 4.1e-29 131.7 121 58.7
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 5.4e-29 131.3 138 55.1
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 1.2e-28 130.2 136 50.7
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 1.6e-28 129.8 136 54.4
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 2.7e-28 129.0 129 51.2
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.7e-28 129.0 125 56.8
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 3.5e-28 128.6 136 54.4
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 6.0e-28 127.9 130 54.6
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 7.8e-28 127.5 129 49.6
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 7.8e-28 127.5 136 54.4
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.0e-27 127.1 136 53.7
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.7e-27 126.3 127 52.8
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 2.3e-27 125.9 131 48.9
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 3.9e-27 125.2 130 55.4
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 3.9e-27 125.2 130 54.6
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 3.9e-27 125.2 132 50.8
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 6.6e-27 124.4 129 49.6
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 8.6e-27 124.0 122 52.5
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.1e-26 123.6 133 51.9
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 1.5e-26 123.2 133 51.9
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 1.9e-26 122.9 130 52.3
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 2.5e-26 122.5 129 48.1
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 2.5e-26 122.5 129 48.1
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 2.5e-26 122.5 129 48.1
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 2.5e-26 122.5 129 48.1
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 5.6e-26 121.3 116 54.3
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 9.5e-26 120.6 129 46.5
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 2.8e-25 119.0 133 45.9
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 1.1e-24 117.1 146 49.3
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 1.8e-24 116.3 138 50.0
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 5.8e-23 111.3 131 48.9
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 9.8e-23 110.5 126 48.4
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 9.8e-23 110.5 125 49.6
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 3.7e-22 108.6 127 50.4
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 4.9e-22 108.2 202 36.6
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 1.9e-21 106.3 130 46.2
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 3.2e-21 105.5 123 50.4
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 4.1e-21 105.1 111 51.4
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 7.1e-21 104.4 126 47.6
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 1.2e-20 103.6 114 51.8
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 7.8e-20 100.9 149 41.6
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 3.3e-18 95.5 88 55.7
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 4.3e-18 95.1 128 47.7
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 1.4e-16 90.1 124 45.2
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 3.1e-16 89.0 143 43.4
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 4.0e-16 88.6 123 44.7
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 5.2e-16 88.2 131 42.7
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 6.8e-16 87.8 69 59.4
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 2.0e-15 86.3 212 31.1
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 7.6e-15 84.3 129 38.0
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 9.9e-15 84.0 68 57.4
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 9.9e-15 84.0 68 58.8
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 2.1e-12 76.3 134 41.0
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 3.5e-12 75.5 133 31.6
SHI33895 Sapria himalayana HOM05D003443 ORTHO05D008640 2.8e-09 65.9 121 36.4
Cfa009666 Carpinus fangiana HOM05D003443 ORTHO05D008640 4.0e-08 62.0 73 45.2
Actinidia18153 Actinidia chinensis HOM05D003443 ORTHO05D008640 5.2e-08 61.6 62 58.1
Cpa.g.sc36.31 Carica papaya HOM05D003443 ORTHO05D008640 3.4e-07 58.9 103 36.9


User provided reference genes

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