Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012940.2 Solanum lycopersicum HOM05D007294 ORTHO05D009205 2.1e-71 272.3 145 100.0
PGSC0003DMG400000918 Solanum tuberosum HOM05D007294 ORTHO05D009205 4.0e-70 268.1 145 97.9
Sopen11g007690 Solanum pennellii HOM05D007294 ORTHO05D009205 8.9e-70 266.9 145 97.2
CAN.G127.6 Capsicum annuum HOM05D007294 ORTHO05D009205 2.1e-58 229.2 146 88.4
Nitab4.5_0001086g0040 Nicotiana tabacum HOM05D007294 ORTHO05D009205 1.9e-48 196.1 121 84.3
Nitab4.5_0002798g0020 Nicotiana tabacum HOM05D007294 ORTHO05D009205 7.3e-48 194.1 119 84.0
Oeu026142.1 Olea europaea HOM05D007294 ORTHO05D009205 4.4e-45 184.9 147 64.6
Potri.002G085200 Populus trichocarpa HOM05D007294 ORTHO05D009205 4.4e-45 184.9 124 73.4
Ciclev10002717m.g Citrus clementina HOM05D007294 ORTHO05D009205 9.9e-45 183.7 136 71.3
Manes.18G075800 Manihot esculenta HOM05D007294 ORTHO05D009205 1.9e-43 179.5 124 71.0
Thecc.08G122800 Theobroma cacao HOM05D007294 ORTHO05D009205 4.2e-43 178.3 113 75.2
TAR628G0157 Trochodendron aralioides HOM05D007294 ORTHO05D009205 4.2e-43 178.3 122 72.1
MSTRG.22416 Avicennia marina HOM05D007294 ORTHO05D009205 2.1e-42 176.0 147 65.3
Gorai.009G244600 Gossypium raimondii HOM05D007294 ORTHO05D009205 2.1e-42 176.0 117 74.4
Sabra02G0066700 Salix brachista HOM05D007294 ORTHO05D009205 2.1e-42 176.0 124 70.2
RcHm_v2.0_Chr6g0295521 Rosa chinensis HOM05D007294 ORTHO05D009205 3.5e-42 175.3 116 73.3
Dinv27334 Davidia involucrata HOM05D007294 ORTHO05D009205 6.0e-42 174.5 146 61.6
GSVIVG01008891001 Vitis vinifera HOM05D007294 ORTHO05D009205 6.0e-42 174.5 122 70.5
Hma1.2p1_0186F.1_g081585 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 7.8e-42 174.1 150 60.0
CiPaw.06G028900 Carya illinoinensis HOM05D007294 ORTHO05D009205 1.0e-41 173.7 145 63.4
Duzib093G0485 Durio zibethinus HOM05D007294 ORTHO05D009205 1.7e-41 172.9 128 67.2
MD08G1165800 Malus domestica HOM05D007294 ORTHO05D009205 3.0e-41 172.2 120 70.8
Medtr3g072590 Medicago truncatula HOM05D007294 ORTHO05D009205 3.0e-41 172.2 145 65.5
CANSAT25G2515 Cannabis sativa HOM05D007294 ORTHO05D009205 5.1e-41 171.4 144 68.1
Nn5g28204 Nelumbo nucifera HOM05D007294 ORTHO05D009205 8.7e-41 170.6 118 68.6
FAN20G0043 Fragaria x ananassa HOM05D007294 ORTHO05D009205 2.5e-40 169.1 114 71.9
Aqoxy6G00180 Aquilegia oxysepala HOM05D007294 ORTHO05D009205 3.3e-40 168.7 125 68.0
FAN24G1632 Fragaria x ananassa HOM05D007294 ORTHO05D009205 4.3e-40 168.3 138 63.0
Lalb_Chr11g0065821 Lupinus albus HOM05D007294 ORTHO05D009205 4.3e-40 168.3 115 72.2
CsaV3_4G028350 Cucumis sativus L. HOM05D007294 ORTHO05D009205 7.3e-40 167.5 120 71.7
FvH4_2g26680 Fragaria vesca HOM05D007294 ORTHO05D009205 7.3e-40 167.5 138 63.0
DCAR_014100 Daucus carota HOM05D007294 ORTHO05D009205 9.6e-40 167.2 122 68.9
Migut.N03292 Erythranthe guttata HOM05D007294 ORTHO05D009205 2.1e-39 166.0 146 63.0
Gohir.A05G233900 Gossypium hirsutum HOM05D007294 ORTHO05D009205 2.8e-39 165.6 95 82.1
Prupe.1G500700 Prunus persica HOM05D007294 ORTHO05D009205 2.8e-39 165.6 122 67.2
Hund16850 Selenicereus undatus HOM05D007294 ORTHO05D009205 2.8e-39 165.6 95 81.1
MELO3C010470.2 Cucumis melo HOM05D007294 ORTHO05D009205 3.6e-39 165.2 107 74.8
Psat0s375g0040 Pisum sativum HOM05D007294 ORTHO05D009205 3.6e-39 165.2 111 74.8
PGR042G2863 Punica granatum HOM05D007294 ORTHO05D009205 3.6e-39 165.2 124 66.9
CSS0025261 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 6.2e-39 164.5 98 81.6
arahy.Tifrunner.gnm1.ann1.D4BK2C Arachis hypogaea HOM05D007294 ORTHO05D009205 8.1e-39 164.1 143 60.1
arahy.Tifrunner.gnm1.ann1.NH3KYE Arachis hypogaea HOM05D007294 ORTHO05D009205 8.1e-39 164.1 143 60.1
Actinidia23070 Actinidia chinensis HOM05D007294 ORTHO05D009205 1.4e-38 163.3 96 82.3
PSO528G0176 Papaver somniferum HOM05D007294 ORTHO05D009205 4.0e-38 161.8 95 81.1
TWI36G0375 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 4.0e-38 161.8 118 69.5
Glyma.06G111500 Glycine max HOM05D007294 ORTHO05D009205 5.3e-38 161.4 144 61.8
Sed0003401 Sechium edule HOM05D007294 ORTHO05D009205 1.2e-37 160.2 119 68.1
Eucgr.F03773 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.5e-37 159.8 96 79.2
Eucgr.F03776 Eucalyptus grandis HOM05D007294 ORTHO05D009205 1.5e-37 159.8 96 79.2
Phvul.009G123500 Phaseolus vulgaris HOM05D007294 ORTHO05D009205 3.4e-37 158.7 144 61.1
Lsat_1_v5_gn_6_112740 Lactuca sativa HOM05D007294 ORTHO05D009205 7.6e-37 157.5 142 57.7
Ca_15198_v3 Cicer arietinum L. HOM05D007294 ORTHO05D009205 9.9e-37 157.1 95 80.0
Cc10_g10930 Coffea canephora HOM05D007294 ORTHO05D009205 1.3e-36 156.8 153 58.8
Lj1g0002873 Lotus japonicus HOM05D007294 ORTHO05D009205 1.3e-36 156.8 95 81.1
BraA05t20931Z Brassica rapa HOM05D007294 ORTHO05D009205 2.2e-36 156.0 115 67.0
BcaC05g27437 Brassica carinata HOM05D007294 ORTHO05D009205 2.9e-36 155.6 113 68.1
Glyma.04G251200 Glycine max HOM05D007294 ORTHO05D009205 2.9e-36 155.6 144 59.0
Aa31LG9G14290 Aethionema arabicum HOM05D007294 ORTHO05D009205 6.4e-36 154.5 94 76.6
HanXRQChr05g0151051 Helianthus annuus HOM05D007294 ORTHO05D009205 6.4e-36 154.5 97 76.3
MBI03_g33023_MAGBIO Magnolia biondii HOM05D007294 ORTHO05D009040 1.1e-35 153.7 95 76.8
TWI12G0925 Tripterygium wilfordii HOM05D007294 ORTHO05D009205 1.1e-35 153.7 96 76.0
unitig_61.g26063 Utricularia gibba HOM05D007294 ORTHO05D009205 1.1e-35 153.7 95 76.8
ClCG11G015660 Citrullus lanatus HOM05D007294 ORTHO05D009205 2.4e-35 152.5 120 67.5
C05p33890 Brassica napus HOM05D007294 ORTHO05D009205 3.2e-35 152.1 113 67.3
BolC5t32124H Brassica oleracea HOM05D007294 ORTHO05D009205 3.2e-35 152.1 113 67.3
AUR62023647 Chenopodium quinoa HOM05D007294 ORTHO05D009205 3.2e-35 152.1 97 76.3
ECA246G4672 Erigeron canadensis HOM05D007294 ORTHO05D009205 3.2e-35 152.1 142 55.6
Sp6g09730 Schrenkiella parvula HOM05D007294 ORTHO05D009205 5.4e-35 151.4 94 74.5
SGA_v2.0_scaffold25G11113 Striga asiatica HOM05D007294 ORTHO05D009205 1.6e-34 149.8 150 56.0
Thhalv10029072m.g Eutrema salsugineum HOM05D007294 ORTHO05D009205 3.5e-34 148.7 93 75.3
VMungo1309G1993 Vigna mungo HOM05D007294 ORTHO05D009205 6.0e-34 147.9 146 58.9
AL6G42020 Arabidopsis lyrata HOM05D007294 ORTHO05D009205 1.0e-33 147.1 107 70.1
Carub.0006s2684 Capsella rubella HOM05D007294 ORTHO05D009205 1.3e-33 146.7 95 73.7
AT4G08280 Arabidopsis thaliana HOM05D007294 ORTHO05D009205 1.8e-33 146.4 95 73.7
COL.COLO4_12212 Corchorus olitorius HOM05D007294 ORTHO05D009205 2.3e-33 146.0 102 66.7
Sc01g0001240 Simmondsia chinensis HOM05D007294 ORTHO05D009205 5.1e-33 144.8 125 58.4
QL09p035498 Quercus lobata HOM05D007294 ORTHO05D009205 3.3e-32 142.1 99 68.7
Hma1.2p1_0186F.1_g081590 Hydrangea macrophylla HOM05D007294 ORTHO05D009205 3.7e-31 138.7 124 57.3
Atru.chr13.1423 Acer truncatum HOM05D007294 ORTHO05D009205 4.8e-31 138.3 107 65.4
SMO145G0156 Selaginella moellendorffii HOM05D007294 ORTHO05D009205 6.2e-31 137.9 121 58.7
Zm00001eb256090 Zea mays HOM05D007294 ORTHO05D009205 8.1e-31 137.5 96 68.8
Dinv40407 Davidia involucrata HOM05D007294 ORTHO05D009205 1.4e-30 136.7 125 59.2
Os02g0767900 Oryza sativa ssp. japonica HOM05D007294 ORTHO05D009205 1.4e-30 136.7 95 67.4
Haze_00466 Corylus avellana HOM05D007294 ORTHO05D009205 3.1e-30 135.6 116 65.5
Rhsim06G0104800 Rhododendron simsii HOM05D007294 ORTHO05D009205 3.1e-30 135.6 70 90.0
Pp3c23_9240 Physcomitrium patens HOM05D007294 ORTHO05D009205 5.3e-30 134.8 92 65.2
vmacro12540 Vaccinium macrocarpon HOM05D007294 ORTHO05D009205 5.3e-30 134.8 94 72.3
FAN15G3738 Fragaria x ananassa HOM05D007294 ORTHO05D009205 9.0e-30 134.0 91 70.3
AagrBONN_evm.TU.Sc2ySwM_368.1537 Anthoceros agrestis HOM05D007294 ORTHO05D009205 2.0e-29 132.9 133 51.1
CSS0038217 Camellia sinensis var. sinensis HOM05D007294 ORTHO05D009205 5.8e-29 131.3 120 58.3
AUR62004727 Chenopodium quinoa HOM05D007294 ORTHO05D009205 1.4e-27 126.7 71 83.1
SalBow6G4857 Salvia bowleyana HOM05D007294 ORTHO05D009205 4.2e-27 125.2 70 80.0
Ah.13g072640 Amaranthus hybridus HOM05D001216 ORTHO05D008355 7.1e-27 124.4 73 80.8
FAN27G2899 Fragaria x ananassa HOM05D007294 ORTHO05D009205 1.2e-26 123.6 127 55.1
BcaB05g23935 Brassica carinata HOM05D007294 ORTHO05D009205 2.1e-26 122.9 70 80.0
ATR0693G390 Amborella trichopoda HOM05D007294 ORTHO05D009205 6.7e-25 117.9 117 53.8
Mapoly0007s0151 Marchantia polymorpha HOM05D007294 ORTHO05D009205 1.9e-24 116.3 93 58.1
CBR_g48307 Chara braunii HOM05D007294 ORTHO05D009205 2.5e-24 115.9 92 55.4
CDE08G0173 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 7.4e-24 114.4 73 69.9
Cfa015999 Carpinus fangiana HOM05D000760 ORTHO05D009205 3.1e-22 109.0 63 76.2
Peaxi162Scf00395g00315 Petunia axillaris HOM05D007294 ORTHO05D009205 1.9e-19 99.8 120 53.3
CDE04G3292 Ceratophyllum demersum HOM05D007294 ORTHO05D009205 7.1e-19 97.8 70 64.3
Cpa.g.sc36.45 Carica papaya HOM05D007294 ORTHO05D009205 1.8e-14 83.2 76 55.3
CARHR259360 Cardamine hirsuta HOM05D007294 ORTHO05D009205 2.4e-14 82.8 54 70.4
MCO13G582 Micromonas commoda HOM05D007294 ORTHO05D009205 2.5e-11 72.8 88 42.0
Nn2g14282 Nelumbo nucifera HOM05D007294 ORTHO05D009205 5.5e-11 71.6 42 73.8
Dinv40402 Davidia involucrata HOM05D007294 ORTHO05D009205 7.2e-11 71.2 82 50.0


User provided reference genes

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