Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.4e-93 346.3 179 100.0
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 6.0e-92 340.9 179 98.3
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 8.4e-86 320.5 179 93.3
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.4e-72 275.8 185 82.2
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.5e-71 273.1 187 75.4
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.9e-45 186.4 183 56.3
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 6.1e-44 181.4 148 64.2
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.4e-43 180.3 194 55.2
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 6.7e-43 177.9 183 54.1
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 7.4e-42 174.5 123 71.5
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 6.3e-41 171.4 118 70.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 8.2e-41 171.0 199 53.3
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.4e-40 169.5 184 53.8
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 3.1e-40 169.1 109 76.1
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 6.9e-40 167.9 150 59.3
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 9.1e-40 167.5 136 66.9
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.5e-39 166.8 166 56.0
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.6e-39 166.0 109 72.5
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 4.5e-39 165.2 168 57.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.9e-39 164.9 200 50.0
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.9e-39 164.9 200 50.0
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 5.9e-39 164.9 143 59.4
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 5.9e-39 164.9 141 60.3
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 7.7e-39 164.5 150 58.0
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 7.7e-39 164.5 163 55.2
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 7.7e-39 164.5 123 66.7
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 1.0e-38 164.1 98 84.7
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.3e-38 163.7 109 71.6
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.3e-38 163.7 165 54.5
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.7e-38 163.3 192 52.6
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.2e-38 162.9 192 52.6
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 2.9e-38 162.5 188 48.4
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.9e-38 162.5 170 52.4
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.9e-38 162.5 113 69.9
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 5.0e-38 161.8 109 70.6
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.1e-37 160.6 167 52.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.1e-37 160.6 165 53.3
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 1.4e-37 160.2 180 48.3
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 4.2e-37 158.7 107 72.9
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 4.2e-37 158.7 176 52.3
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 5.5e-37 158.3 163 52.8
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 7.2e-37 157.9 109 68.8
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 9.4e-37 157.5 109 70.6
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 2.1e-36 156.4 132 60.6
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 2.1e-36 156.4 171 50.9
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 2.7e-36 156.0 146 56.2
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 6.1e-36 154.8 154 55.8
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 7.9e-36 154.5 105 73.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 7.9e-36 154.5 110 66.4
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 7.9e-36 154.5 109 69.7
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 7.9e-36 154.5 109 66.1
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 1.0e-35 154.1 105 73.3
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.4e-35 153.7 109 71.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 1.4e-35 153.7 109 71.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 1.4e-35 153.7 109 71.6
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.8e-35 153.3 153 51.0
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 3.0e-35 152.5 105 72.4
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 3.0e-35 152.5 101 72.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 3.0e-35 152.5 161 54.0
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 3.9e-35 152.1 123 63.4
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 3.9e-35 152.1 123 63.4
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 3.9e-35 152.1 132 62.1
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 5.1e-35 151.8 179 50.3
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 6.7e-35 151.4 123 62.6
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.7e-35 151.4 110 68.2
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.7e-35 151.4 110 68.2
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 8.8e-35 151.0 123 62.6
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 8.8e-35 151.0 118 62.7
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 8.8e-35 151.0 130 58.5
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.1e-34 150.6 181 50.3
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.1e-34 150.6 95 74.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.1e-34 150.6 174 50.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 2.0e-34 149.8 189 46.6
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 2.6e-34 149.4 111 66.7
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 4.4e-34 148.7 112 65.2
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 4.4e-34 148.7 112 64.3
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.3e-33 147.1 154 51.3
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.2e-33 146.4 117 59.0
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.8e-33 146.0 105 64.8
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 2.8e-33 146.0 109 64.2
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 3.7e-33 145.6 186 47.8
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.7e-33 145.6 95 73.7
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 4.8e-33 145.2 185 47.0
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 6.3e-33 144.8 156 50.0
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.1e-32 144.1 177 44.6
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 9.1e-32 141.0 107 70.1
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 2.0e-31 139.8 112 62.5
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 4.5e-31 138.7 127 59.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.9e-29 133.3 112 62.5
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.3e-27 126.3 105 61.9
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 5.2e-27 125.2 109 58.7
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.5e-26 123.6 86 72.1
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.0e-26 123.2 102 58.8
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 3.3e-26 122.5 102 58.8
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 2.6e-23 112.8 126 45.2
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 6.5e-22 108.2 87 63.2
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.5e-21 106.3 82 52.4
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 4.2e-21 105.5 101 55.4
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 2.1e-20 103.2 137 44.5
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 8.0e-20 101.3 76 60.5
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.3e-19 99.8 107 46.7
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.5e-18 97.1 132 45.5
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 9.8e-18 94.4 62 71.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 4.8e-17 92.0 90 48.9
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 3.7e-09 65.9 44 70.5
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 7.0e-08 61.6 99 38.4


User provided reference genes

Program Settings