Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g012610.2 Solanum lycopersicum HOM05D004683 ORTHO05D005388 6.0e-206 720.7 387 100.0
PGSC0003DMG400013358 Solanum tuberosum HOM05D004683 ORTHO05D005388 5.4e-199 697.6 388 96.9
CAN.G696.10 Capsicum annuum HOM05D004683 ORTHO05D005388 8.7e-181 637.1 392 90.3
Nitab4.5_0001668g0040 Nicotiana tabacum HOM05D004683 ORTHO05D005388 6.5e-168 594.3 398 84.7
Peaxi162Scf00352g01036 Petunia axillaris HOM05D004683 ORTHO05D005388 1.9e-159 566.2 388 82.2
PGSC0003DMG400023555 Solanum tuberosum HOM05D004683 ORTHO05D005388 7.5e-116 421.4 403 64.0
Peaxi162Scf01544g00025 Petunia axillaris HOM05D004683 ORTHO05D005388 6.0e-113 411.8 404 63.9
Nitab4.5_0004646g0030 Nicotiana tabacum HOM05D004683 ORTHO05D005388 1.7e-112 410.2 403 64.8
Manes.09G081701 Manihot esculenta HOM05D004683 ORTHO05D005388 4.9e-107 392.1 405 62.2
Actinidia11898 Actinidia chinensis HOM05D004683 ORTHO05D005388 2.4e-106 389.8 404 59.9
GSVIVG01007216001 Vitis vinifera HOM05D004683 ORTHO05D005388 3.5e-105 386.0 341 65.7
CSS0016540 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.9e-104 382.5 409 58.2
Oeu030103.1 Olea europaea HOM05D004683 ORTHO05D005388 8.6e-104 381.3 392 58.9
Solyc04g014850.3 Solanum lycopersicum HOM05D004683 ORTHO05D005388 1.9e-103 380.2 401 59.6
Sopen04g006980 Solanum pennellii HOM05D004683 ORTHO05D005388 3.3e-103 379.4 401 59.6
Cc09_g00590 Coffea canephora HOM05D004683 ORTHO05D005388 2.8e-102 376.3 349 63.6
Actinidia39280 Actinidia chinensis HOM05D004683 ORTHO05D005388 1.4e-101 374.0 404 58.2
Prupe.4G006700 Prunus persica HOM05D004683 ORTHO05D005388 2.4e-101 373.2 390 59.7
RcHm_v2.0_Chr5g0000761 Rosa chinensis HOM05D004683 ORTHO05D005388 3.1e-101 372.9 394 59.1
Oeu052851.1 Olea europaea HOM05D004683 ORTHO05D005388 6.8e-101 371.7 396 61.4
ClCG01G010700 Citrullus lanatus HOM05D004683 ORTHO05D005388 2.0e-100 370.2 404 59.9
Hma1.2p1_0657F.1_g196900 Hydrangea macrophylla HOM05D004683 ORTHO05D005388 2.6e-100 369.8 414 58.7
Sed0018998 Sechium edule HOM05D004683 ORTHO05D005388 3.2e-98 362.8 403 57.3
TAR626G1909 Trochodendron aralioides HOM05D004683 ORTHO05D005388 3.2e-98 362.8 431 55.2
Oeu052866.1 Olea europaea HOM05D004683 ORTHO05D005388 4.2e-98 362.5 421 58.2
MD10G1336700 Malus domestica HOM05D004683 ORTHO05D005388 9.2e-98 361.3 393 60.3
CsaV3_UNG061480 Cucumis sativus L. HOM05D004683 ORTHO05D005388 1.2e-97 360.9 404 58.2
Potri.006G017200 Populus trichocarpa HOM05D004683 ORTHO05D005388 2.1e-97 360.1 396 59.8
Sabra06G0012200 Salix brachista HOM05D004683 ORTHO05D005388 2.1e-97 360.1 395 60.0
Sopen11g007340 Solanum pennellii HOM05D004683 ORTHO05D005388 4.6e-97 359.0 184 98.9
Duzib160G0680 Durio zibethinus HOM05D004683 ORTHO05D005388 6.0e-97 358.6 383 58.0
Cfa000066 Carpinus fangiana HOM05D004683 ORTHO05D005388 7.8e-97 358.2 408 56.4
MELO3C025532.2 Cucumis melo HOM05D004683 ORTHO05D005388 1.7e-96 357.1 409 57.0
FAN25G2373 Fragaria x ananassa HOM05D004683 ORTHO05D005388 8.7e-96 354.8 394 57.4
FvH4_3g00551 Fragaria vesca HOM05D004683 ORTHO05D005388 1.5e-95 354.0 397 56.9
Lj2A259T33 Lonicera japonica HOM05D004683 ORTHO05D005388 4.3e-95 352.4 408 55.1
CSS0018655 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.8e-94 349.7 406 55.7
Nn1g07478 Nelumbo nucifera HOM05D004683 ORTHO05D005388 2.8e-94 349.7 430 54.9
SalBow8G0627 Salvia bowleyana HOM05D004683 ORTHO05D005388 2.8e-94 349.7 431 54.5
Duzib235G0361 Durio zibethinus HOM05D004683 ORTHO05D005388 1.8e-93 347.1 393 55.0
Dinv04407 Davidia involucrata HOM05D004683 ORTHO05D005388 2.4e-93 346.7 350 60.0
MBI19_g44082_MAGBIO Magnolia biondii HOM05D004683 ORTHO05D005388 4.0e-93 345.9 416 55.0
CiPaw.09G105900 Carya illinoinensis HOM05D004683 ORTHO05D005388 2.6e-92 343.2 411 54.7
Potri.016G008400 Populus trichocarpa HOM05D004683 ORTHO05D005388 2.6e-92 343.2 399 58.1
Atru.chr1.2335 Acer truncatum HOM05D004683 ORTHO05D005388 2.9e-91 339.7 315 63.5
CANSAT56G4109 Cannabis sativa HOM05D004683 ORTHO05D005388 4.2e-90 335.9 410 54.1
MD00G1058000 Malus domestica HOM05D004683 ORTHO05D005388 1.2e-89 334.3 392 56.9
COL.COLO4_15259 Corchorus olitorius HOM05D004683 ORTHO05D005388 1.0e-88 331.3 412 53.9
PGR004G0928 Punica granatum HOM05D004683 ORTHO05D005388 5.1e-88 328.9 413 53.0
Phvul.006G141000 Phaseolus vulgaris HOM05D004683 ORTHO05D005388 1.9e-87 327.0 397 54.2
Nitab4.5_0001109g0120 Nicotiana tabacum HOM05D004683 ORTHO05D005388 5.6e-87 325.5 403 55.8
Thecc.06G237400 Theobroma cacao HOM05D004683 ORTHO05D005388 1.3e-86 324.3 404 51.7
Migut.M01430 Erythranthe guttata HOM05D004683 ORTHO05D005388 8.1e-86 321.6 390 53.8
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 2.4e-85 320.1 387 55.6
QL05p068304 Quercus lobata HOM05D004683 ORTHO05D005388 7.6e-84 315.1 404 51.5
Sabra16G0012800 Salix brachista HOM05D004683 ORTHO05D005388 7.6e-84 315.1 422 54.0
CsaV3_1G015800 Cucumis sativus L. HOM05D004683 ORTHO05D005388 1.3e-83 314.3 405 53.3
Sopen00g010710 Solanum pennellii HOM05D004683 ORTHO05D005388 2.9e-83 313.2 179 98.3
PSO541G4951 Papaver somniferum HOM05D004683 ORTHO05D005388 1.1e-82 311.2 445 51.2
Aqoxy4G02236 Aquilegia oxysepala HOM05D004683 ORTHO05D005388 1.4e-82 310.8 395 51.4
Lsat_1_v5_gn_7_14120 Lactuca sativa HOM05D004683 ORTHO05D005388 4.2e-82 309.3 402 53.2
PSO675G6369 Papaver somniferum HOM05D004683 ORTHO05D005388 7.1e-82 308.5 445 50.8
Gorai.010G188900 Gossypium raimondii HOM05D004683 ORTHO05D005388 1.2e-81 307.8 369 53.9
Eucgr.D01443 Eucalyptus grandis HOM05D004683 ORTHO05D005388 3.5e-81 306.2 385 53.0
DCAR_030854 Daucus carota HOM05D004683 ORTHO05D005388 1.0e-80 304.7 401 51.9
Gohir.A06G155500 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.3e-80 304.3 369 53.7
Gohir.D06G161900 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.3e-80 304.3 369 53.1
QL05p068796 Quercus lobata HOM05D004683 ORTHO05D005388 3.0e-80 303.1 409 49.1
Gohir.A10G008300 Gossypium hirsutum HOM05D004683 ORTHO05D005388 1.1e-79 301.2 353 54.1
Gohir.D10G008100 Gossypium hirsutum HOM05D004683 ORTHO05D005388 7.4e-79 298.5 332 56.3
Rhsim02G0091200 Rhododendron simsii HOM05D004683 ORTHO05D005388 1.1e-77 294.7 399 50.4
Lj6g0001835 Lotus japonicus HOM05D004683 ORTHO05D005388 1.4e-77 294.3 392 51.3
Lalb_Chr15g0088101 Lupinus albus HOM05D004683 ORTHO05D005388 1.8e-77 293.9 392 51.8
Gorai.011G008800 Gossypium raimondii HOM05D004683 ORTHO05D005388 3.1e-77 293.1 332 55.7
THA.LOC104806735 Tarenaya hassleriana HOM05D004683 ORTHO05D005388 1.5e-76 290.8 407 50.4
TWI38G0781 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 2.0e-76 290.4 401 49.9
Lsat_1_v5_gn_0_24381 Lactuca sativa HOM05D004683 ORTHO05D005388 4.5e-76 289.3 403 53.6
arahy.Tifrunner.gnm1.ann1.5M71YA Arachis hypogaea HOM05D004683 ORTHO05D005388 5.8e-76 288.9 402 48.5
arahy.Tifrunner.gnm1.ann1.L4TARN Arachis hypogaea HOM05D004683 ORTHO05D005388 9.9e-76 288.1 402 48.5
AUR62021828 Chenopodium quinoa HOM05D004683 ORTHO05D005388 8.4e-75 285.0 388 50.5
Sc05g0009730 Simmondsia chinensis HOM05D004683 ORTHO05D005388 1.9e-74 283.9 357 51.3
Medtr2g026550 Medicago truncatula HOM05D004683 ORTHO05D005388 5.5e-74 282.3 403 50.4
CSS0042800 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.2e-73 281.2 319 58.6
TWI63G0041 Tripterygium wilfordii HOM05D004683 ORTHO05D005388 1.2e-73 281.2 404 49.8
AUR62012829 Chenopodium quinoa HOM05D004683 ORTHO05D005388 2.5e-71 273.5 390 50.0
Haze_06980 Corylus avellana HOM05D004683 ORTHO05D005388 1.3e-70 271.2 396 48.0
EL10Ac8g20240 Beta vulgaris HOM05D004683 ORTHO05D005388 6.2e-70 268.9 388 50.3
Ah.14g087460 Amaranthus hybridus HOM05D004683 ORTHO05D005388 1.4e-69 267.7 390 50.3
HanXRQChr15g0470281 Helianthus annuus HOM05D004683 ORTHO05D005388 3.4e-68 263.1 365 51.0
vmacro15736 Vaccinium macrocarpon HOM05D004683 ORTHO05D005388 4.5e-68 262.7 379 48.3
CDE04G2289 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 7.6e-68 261.9 314 52.2
CAN.G1263.24 Capsicum annuum HOM05D004683 ORTHO05D005388 2.9e-67 260.0 398 49.5
Glyma.15G117000 Glycine max HOM05D004683 ORTHO05D005388 4.9e-67 259.2 401 45.9
Psat1g173720 Pisum sativum HOM05D004683 ORTHO05D005388 6.5e-67 258.8 401 49.1
Hund21139 Selenicereus undatus HOM05D004683 ORTHO05D005388 1.4e-66 257.7 394 48.2
TPR.G10575 Trifolium pratense HOM05D004683 ORTHO05D005388 3.2e-66 256.5 400 46.2
Glyma.09G012400 Glycine max HOM05D004683 ORTHO05D005388 9.3e-66 255.0 405 45.7
ATR0624G003 Amborella trichopoda HOM05D004683 ORTHO05D005388 3.0e-64 250.0 304 52.6
Aa31LG6G60 Aethionema arabicum HOM05D004683 ORTHO05D005388 4.8e-62 242.7 419 45.1
VMungo0540G0168 Vigna mungo HOM05D004683 ORTHO05D005388 1.4e-61 241.1 398 45.0
MSTRG.7144 Avicennia marina HOM05D004683 ORTHO05D005388 9.0e-61 238.4 275 57.8
CDE06G0298 Ceratophyllum demersum HOM05D000165 ORTHO05D005388 1.3e-59 234.6 280 53.6
Sabra16G0012500 Salix brachista HOM05D004683 ORTHO05D005388 8.5e-59 231.9 262 60.7
Cpa.g.sc27.252 Carica papaya HOM05D004683 ORTHO05D005388 4.2e-58 229.6 308 52.3
HPP92_014031 Vanilla planifolia HOM05D004683 ORTHO05D005388 4.2e-58 229.6 411 43.1
Ca_00746_v3 Cicer arietinum L. HOM05D004683 ORTHO05D005388 7.2e-58 228.8 329 50.2
Sp7g16950 Schrenkiella parvula HOM05D004683 ORTHO05D005388 3.6e-57 226.5 381 47.0
Thhalv10025641m.g Eutrema salsugineum HOM05D004683 ORTHO05D005388 7.9e-57 225.3 372 47.0
BolC1t02477H Brassica oleracea HOM05D004683 ORTHO05D005388 3.9e-56 223.0 375 47.5
BcaC09g50454 Brassica carinata HOM05D004683 ORTHO05D005388 1.1e-55 221.5 381 46.7
C01p25270 Brassica napus HOM05D004683 ORTHO05D005388 1.1e-55 221.5 381 46.7
Ah.09g234040 Amaranthus hybridus HOM05D004683 ORTHO05D005388 2.5e-55 220.3 389 45.2
AL7G37470 Arabidopsis lyrata HOM05D004683 ORTHO05D005388 4.3e-55 219.5 388 45.9
BraA01t01938Z Brassica rapa HOM05D004683 ORTHO05D005388 4.3e-55 219.5 320 51.2
Carub.0007s2417 Capsella rubella HOM05D004683 ORTHO05D005388 5.7e-55 219.2 393 46.6
CARHR223850 Cardamine hirsuta HOM05D004683 ORTHO05D005388 1.3e-54 218.0 392 46.9
AT4G17240 Arabidopsis thaliana HOM05D004683 ORTHO05D005388 2.2e-54 217.2 394 46.2
A01p20140 Brassica napus HOM05D004683 ORTHO05D005388 2.2e-54 217.2 371 46.9
HPP92_028363 Vanilla planifolia HOM05D004683 ORTHO05D005388 6.3e-54 215.7 434 40.6
Ciclev10017876m.g Citrus clementina HOM05D004683 ORTHO05D005388 2.0e-52 210.7 396 43.2
TAR341G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 7.7e-52 208.8 284 51.1
TAR485G0001 Trochodendron aralioides HOM05D004683 ORTHO05D005388 7.7e-52 208.8 284 51.1
unitig_37.g12183 Utricularia gibba HOM05D004683 ORTHO05D005388 6.1e-49 199.1 216 58.8
ECA246G4668 Erigeron canadensis HOM05D004683 ORTHO05D005388 4.5e-44 183.0 301 44.9
MSTRG.16041 Avicennia marina HOM05D004683 ORTHO05D005388 5.7e-39 166.0 191 57.6
SEGI_35929 Sequoiadendron giganteum HOM05D004683 ORTHO05D005388 7.4e-39 165.6 387 38.5
Zm00001eb214850 Zea mays HOM05D004683 ORTHO05D005388 9.7e-39 165.2 288 42.0
Zm00001eb057420 Zea mays HOM05D004683 ORTHO05D005388 4.1e-37 159.8 290 43.1
BcaNung00108 Brassica carinata HOM05D004683 ORTHO05D005388 2.9e-35 153.7 231 51.5
MSTRG.14824 Avicennia marina HOM05D004683 ORTHO05D005388 3.0e-32 143.7 118 72.9
CSS0011389 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.8e-32 142.5 125 61.6
CDE04G1899 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 7.5e-31 139.0 356 37.6
PSO339G0967 Papaver somniferum HOM05D004683 ORTHO05D005388 4.1e-29 133.3 86 79.1
CSS0001859 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.5e-27 125.9 212 46.2
CSS0027604 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 6.5e-27 125.9 212 46.2
CSS0022133 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 2.7e-25 120.6 187 45.5
CDE07G1645 Ceratophyllum demersum HOM05D004683 ORTHO05D005388 1.3e-22 111.7 262 35.5
Os03g0750900 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 2.2e-22 110.9 252 38.5
A09p40660 Brassica napus HOM05D004683 ORTHO05D005388 2.2e-14 84.3 64 75.0
CSS0009085 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.1e-13 82.0 205 36.1
COL.COLO4_30227 Corchorus olitorius HOM05D001156 ORTHO05D001006 1.4e-13 81.6 112 50.9
CSS0022243 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 1.8e-13 81.3 214 36.0
CSS0049827 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.2e-13 80.5 182 37.4
CSS0017523 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 4.1e-13 80.1 214 35.5
CSS0042721 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 5.4e-13 79.7 214 35.5
CSS0004114 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 7.0e-13 79.3 214 35.5
SMO351G0434 Selaginella moellendorffii HOM05D025386 ORTHO05D005388 3.5e-12 77.0 216 32.4
FAN11G0338 Fragaria x ananassa HOM05D004683 ORTHO05D035386 9.5e-10 68.9 83 54.2
Os05g0547100 Oryza sativa ssp. japonica HOM05D004683 ORTHO05D005388 3.6e-09 67.0 160 37.5
Sabra19G0093600 Salix brachista HOM05D000057 ORTHO05D005388 3.6e-09 67.0 59 69.5
CSS0019011 Camellia sinensis var. sinensis HOM05D004683 ORTHO05D005388 3.1e-08 63.9 183 32.8
CAN.G696.6 Capsicum annuum HOM05D005219 ORTHO05D001154 2.2e-06 57.8 42 78.6


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