Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g011410.3 Solanum lycopersicum HOM05D007545 ORTHO05D009579 4.0e-74 283.1 139 100.0
PGSC0003DMG400013237 Solanum tuberosum HOM05D007545 ORTHO05D009579 4.1e-71 273.1 139 96.4
Sopen11g006210 Solanum pennellii HOM05D007545 ORTHO05D009579 1.0e-69 268.5 134 99.3
Nitab4.5_0010123g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 3.7e-64 250.0 139 87.8
Nitab4.5_0004239g0030 Nicotiana tabacum HOM05D007545 ORTHO05D009579 9.2e-63 245.4 139 85.6
CAN.G222.58 Capsicum annuum HOM05D007545 ORTHO05D009579 3.9e-61 240.0 139 84.2
Peaxi162Scf00562g00002 Petunia axillaris HOM05D007545 ORTHO05D009579 5.8e-57 226.1 141 80.1
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 4.9e-56 223.0 129 83.7
Nitab4.5_0001650g0140 Nicotiana tabacum HOM05D007545 ORTHO05D009579 7.1e-55 219.2 139 79.9
Nitab4.5_0001088g0020 Nicotiana tabacum HOM05D007545 ORTHO05D009579 6.0e-54 216.1 128 83.6
Gohir.D08G049200 Gossypium hirsutum HOM05D007545 ORTHO05D009579 3.1e-34 150.6 139 51.1
Actinidia06485 Actinidia chinensis HOM05D007545 ORTHO05D009579 5.3e-34 149.8 133 54.9
Prupe.3G166000 Prunus persica HOM05D007545 ORTHO05D009579 2.6e-33 147.5 139 50.4
Oeu030299.1 Olea europaea HOM05D007545 ORTHO05D009579 3.4e-33 147.1 133 55.6
CSS0045109 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 9.9e-33 145.6 133 50.4
CSS0047431 Camellia sinensis var. sinensis HOM05D007545 ORTHO05D009579 9.9e-33 145.6 133 50.4
Gorai.004G048700 Gossypium raimondii HOM05D007545 ORTHO05D009579 4.9e-32 143.3 135 49.6
Lj4C259T9 Lonicera japonica HOM05D007545 ORTHO05D009579 2.4e-31 141.0 133 51.9
TWI77G0027 Tripterygium wilfordii HOM05D007545 ORTHO05D009579 1.3e-29 135.2 136 47.8
Thhalv10007116m.g Eutrema salsugineum HOM05D007545 ORTHO05D009579 3.0e-29 134.0 139 46.8
Migut.K00924 Erythranthe guttata HOM05D007545 ORTHO05D009579 3.9e-29 133.7 135 52.6
RcHm_v2.0_Chr3g0491601 Rosa chinensis HOM05D007545 ORTHO05D009579 6.6e-29 132.9 136 47.1
Sp1g08270 Schrenkiella parvula HOM05D001024 ORTHO05D009579 1.1e-28 132.1 139 46.8
BraA06t23847Z Brassica rapa HOM05D007545 ORTHO05D009579 1.5e-28 131.7 139 46.0
Aa31LG1G5330 Aethionema arabicum HOM05D007545 ORTHO05D009579 1.9e-28 131.3 139 46.0
Haze_14281 Corylus avellana HOM05D007545 ORTHO05D009579 1.9e-28 131.3 120 52.5
MBI19_g08382_MAGBIO Magnolia biondii HOM05D007545 ORTHO05D009579 2.5e-28 131.0 127 49.6
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 2.5e-28 131.0 126 48.4
A06p06360 Brassica napus HOM05D007545 ORTHO05D009579 3.3e-28 130.6 139 46.0
Gohir.D11G205366 Gossypium hirsutum HOM05D007545 ORTHO05D009579 4.3e-28 130.2 140 45.7
ClCG05G010640 Citrullus lanatus HOM05D007545 ORTHO05D009579 5.6e-28 129.8 135 45.2
FAN26G0753 Fragaria x ananassa HOM05D007545 ORTHO05D009579 5.6e-28 129.8 141 46.1
Sc14g0006910 Simmondsia chinensis HOM05D007545 ORTHO05D009579 5.6e-28 129.8 138 47.8
CARHR009650 Cardamine hirsuta HOM05D007545 ORTHO05D009579 7.4e-28 129.4 139 45.3
Ciclev10011347m.g Citrus clementina HOM05D007545 ORTHO05D009579 7.4e-28 129.4 139 45.3
C05p07760 Brassica napus HOM05D007545 ORTHO05D009579 2.8e-27 127.5 139 44.6
BolC5t29527H Brassica oleracea HOM05D007545 ORTHO05D009579 2.8e-27 127.5 139 44.6
FAN19G0914 Fragaria x ananassa HOM05D007545 ORTHO05D009579 2.8e-27 127.5 141 44.7
AL1G20230 Arabidopsis lyrata HOM05D007545 ORTHO05D009579 3.6e-27 127.1 139 43.9
MELO3C032020.2 Cucumis melo HOM05D007545 ORTHO05D009579 1.1e-26 125.6 132 46.2
AT1G09680 Arabidopsis thaliana HOM05D007545 ORTHO05D009579 1.4e-26 125.2 139 43.9
ATR0661G317 Amborella trichopoda HOM05D007545 ORTHO05D009579 2.4e-26 124.4 139 44.6
Nn3g18372 Nelumbo nucifera HOM05D007545 ORTHO05D009579 2.4e-26 124.4 133 45.9
MD17G1268500 Malus domestica HOM05D007545 ORTHO05D009579 4.0e-26 123.6 117 49.6
Gohir.A08G039000 Gossypium hirsutum HOM05D007545 ORTHO05D009579 9.0e-26 122.5 139 44.6
LjContig00141g0003453 Lotus japonicus HOM05D007545 ORTHO05D009579 9.0e-26 122.5 139 44.6
SalBow5G0095 Salvia bowleyana HOM05D007545 ORTHO05D009579 9.0e-26 122.5 126 47.6
Eucgr.F02875 Eucalyptus grandis HOM05D007545 ORTHO05D009579 1.5e-25 121.7 139 44.6
THA.LOC104805633 Tarenaya hassleriana HOM05D007545 ORTHO05D009579 2.6e-25 120.9 139 43.2
HanXRQChr14g0457331 Helianthus annuus HOM05D007545 ORTHO05D009579 7.6e-25 119.4 139 47.5
CiPaw.03G073600 Carya illinoinensis HOM05D007545 ORTHO05D009579 9.9e-25 119.0 117 53.8
TAR371G0190 Trochodendron aralioides HOM05D007545 ORTHO05D009579 9.9e-25 119.0 117 50.4
Sed0004069 Sechium edule HOM05D007545 ORTHO05D009579 2.9e-24 117.5 132 43.2
Carub.0001s0902 Capsella rubella HOM05D007545 ORTHO05D009579 3.8e-24 117.1 136 42.6
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 3.8e-24 117.1 129 43.4
Cfa007791 Carpinus fangiana HOM05D007545 ORTHO05D009579 4.9e-24 116.7 117 47.9
Hund13089 Selenicereus undatus HOM05D007545 ORTHO05D009579 4.9e-24 116.7 133 43.6
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 6.4e-24 116.3 130 43.8
Phvul.008G237700 Phaseolus vulgaris HOM05D007545 ORTHO05D009579 6.4e-24 116.3 141 43.3
Atru.chr1.1983 Acer truncatum HOM05D007545 ORTHO05D009579 1.1e-23 115.5 137 41.6
Potri.017G131400 Populus trichocarpa HOM05D007545 ORTHO05D009579 4.2e-23 113.6 90 55.6
Lalb_Chr10g0104281 Lupinus albus HOM05D007545 ORTHO05D009579 5.5e-23 113.2 141 41.8
VMungo0647G0528 Vigna mungo HOM05D007545 ORTHO05D009579 5.5e-23 113.2 141 40.4
Sabra17G0109500 Salix brachista HOM05D007545 ORTHO05D009579 1.2e-22 112.1 92 53.3
Glyma.02G243500 Glycine max HOM05D007545 ORTHO05D009579 1.6e-22 111.7 144 41.0
PGR004G2599 Punica granatum HOM05D007545 ORTHO05D009579 2.1e-22 111.3 139 40.3
ECA238G0700 Erigeron canadensis HOM05D007545 ORTHO05D009579 3.5e-22 110.5 136 45.6
COL.COLO4_13423 Corchorus olitorius HOM05D007545 ORTHO05D009579 6.0e-22 109.8 90 53.3
TPR.G23654 Trifolium pratense HOM05D007545 ORTHO05D009579 1.3e-21 108.6 143 41.3
Psat2g047200 Pisum sativum HOM05D007545 ORTHO05D009579 2.3e-21 107.8 141 41.1
Lsat_1_v5_gn_2_68461 Lactuca sativa HOM05D007545 ORTHO05D009579 5.1e-21 106.7 140 40.7
Hma1.2p1_0158F.1_g070060 Hydrangea macrophylla HOM05D007545 ORTHO05D009579 1.5e-20 105.1 85 57.6
Manes.01G119900 Manihot esculenta HOM05D007545 ORTHO05D009579 2.5e-20 104.4 95 48.4
Medtr5g077930 Medicago truncatula HOM05D007545 ORTHO05D009579 5.6e-20 103.2 139 41.0
ATR0753G016 Amborella trichopoda HOM05D007545 ORTHO05D009579 9.6e-20 102.4 142 38.0
Cpa.g.sc340.2 Carica papaya HOM05D007545 ORTHO05D009579 9.6e-20 102.4 98 52.0
Rhsim10G0178600 Rhododendron simsii HOM05D007545 ORTHO05D009579 1.3e-19 102.1 97 47.4
Nitab4.5_0005124g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 2.4e-18 97.8 54 83.3
Ca_05835_v3 Cicer arietinum L. HOM05D007545 ORTHO05D009579 3.1e-18 97.4 126 40.5
QL08p020033 Quercus lobata HOM05D007545 ORTHO05D009579 2.0e-17 94.7 87 52.9
Sed0020460 Sechium edule HOM05D007545 ORTHO05D009579 1.3e-16 92.0 133 39.1
Aqoxy3G04069 Aquilegia oxysepala HOM05D007545 ORTHO05D009579 2.9e-16 90.9 111 43.2
CANSAT64G1149 Cannabis sativa HOM05D007545 ORTHO05D009579 2.9e-16 90.9 126 38.9
QL05p016537 Quercus lobata HOM05D007545 ORTHO05D009579 3.8e-16 90.5 87 50.6
GSVIVG01030674001 Vitis vinifera HOM05D007545 ORTHO05D009579 3.2e-15 87.4 122 39.3
SEGI_34198 Sequoiadendron giganteum HOM05D007545 ORTHO05D009579 7.9e-14 82.8 118 35.6
Gorai.007G220500 Gossypium raimondii HOM05D007545 ORTHO05D009579 2.5e-12 77.8 139 34.5
Nitab4.5_0009075g0010 Nicotiana tabacum HOM05D007545 ORTHO05D009579 6.9e-10 69.7 38 84.2
Dinv28181 Davidia involucrata HOM05D007545 ORTHO05D009579 1.4e-07 62.0 51 54.9
HPP92_026949 Vanilla planifolia HOM05D007545 ORTHO05D009579 1.9e-07 61.6 91 33.0
Ca_20820_v3 Cicer arietinum L. HOM05D007083 ORTHO05D008801 2.5e-07 61.2 113 29.2
HanXRQChr12g0374971 Helianthus annuus HOM05D007083 ORTHO05D008801 3.2e-07 60.8 123 27.6
Aqoxy1G00452 Aquilegia oxysepala HOM05D007455 ORTHO05D009431 4.2e-07 60.5 125 30.4
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 7.2e-07 59.7 103 33.0
CAN.G578.7 Capsicum annuum HOM05D002890 ORTHO05D009847 2.1e-06 58.2 143 30.1
SEGI_33147 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 2.1e-06 58.2 102 33.3
Sp3g28900 Schrenkiella parvula HOM05D007083 ORTHO05D008801 2.7e-06 57.8 126 26.2
CANSAT21G0576 Cannabis sativa HOM05D007496 ORTHO05D009479 6.1e-06 56.6 130 25.4
Rhsim13G0211000 Rhododendron simsii HOM05D007455 ORTHO05D009431 6.1e-06 56.6 95 29.5
Solyc01g109060.4 Solanum lycopersicum HOM05D007083 ORTHO05D008801 6.1e-06 56.6 113 27.4
Sopen01g051260 Solanum pennellii HOM05D007083 ORTHO05D008801 6.1e-06 56.6 95 30.5
PGSC0003DMG400025930 Solanum tuberosum HOM05D007083 ORTHO05D008801 6.1e-06 56.6 95 30.5
Zm00001eb080520 Zea mays HOM05D007545 ORTHO05D009579 6.1e-06 56.6 128 28.9
Zm00001eb080530 Zea mays HOM05D007545 ORTHO05D009579 6.1e-06 56.6 128 28.9
Cc09_g01660 Coffea canephora HOM05D002890 ORTHO05D009847 7.9e-06 56.2 119 30.3


User provided reference genes

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