Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 3.9e-235 818.1 545 100.0
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 2.4e-224 782.3 580 92.6
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.5e-166 588.2 567 69.8
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 5.7e-162 575.1 552 69.9
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 2.1e-140 503.4 467 74.5
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 2.3e-126 456.8 560 63.0
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 6.2e-116 422.2 558 62.7
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.8e-113 412.9 559 60.6
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 1.4e-112 411.0 275 83.3
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 3.2e-112 409.8 555 60.5
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 6.7e-110 402.1 563 61.6
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 4.5e-106 389.4 563 59.9
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.1e-104 384.8 570 52.8
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 1.1e-104 384.8 561 51.0
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 5.5e-104 382.5 553 59.1
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 5.1e-102 375.9 485 65.8
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 6.7e-102 375.6 559 52.1
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 4.8e-100 369.4 555 57.7
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 4.0e-99 366.3 553 49.5
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 5.3e-99 365.9 565 50.1
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 6.9e-99 365.5 554 51.6
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 1.7e-97 360.9 565 54.7
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 2.2e-97 360.5 551 58.6
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 8.4e-97 358.6 505 55.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 7.9e-95 352.1 515 53.8
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.3e-94 350.5 565 56.3
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 3.0e-94 350.1 518 53.7
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 9.7e-93 345.1 559 54.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 2.2e-92 344.0 558 48.6
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 2.6e-90 337.0 489 61.6
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 1.0e-89 335.1 494 52.2
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.3e-89 334.7 552 54.5
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.7e-89 334.3 520 52.7
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 2.2e-89 334.0 555 47.4
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 3.8e-89 333.2 516 51.0
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 3.8e-89 333.2 554 55.6
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 5.0e-89 332.8 505 58.6
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 6.5e-89 332.4 505 58.8
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.9e-88 330.9 558 48.4
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 7.2e-88 328.9 550 56.5
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 9.4e-88 328.6 473 60.5
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 1.2e-87 328.2 519 51.8
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 2.7e-87 327.0 557 55.3
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 2.7e-87 327.0 505 58.2
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 3.6e-87 326.6 522 51.7
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 7.9e-87 325.5 506 58.5
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 3.0e-86 323.6 462 55.8
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 5.1e-86 322.8 552 56.2
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.0e-85 320.9 426 54.9
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 3.3e-85 320.1 521 51.2
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 1.3e-84 318.2 486 58.4
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.7e-84 317.8 526 47.3
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 3.7e-84 316.6 560 56.8
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 3.7e-84 316.6 565 55.9
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 8.2e-84 315.5 520 51.2
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 1.4e-83 314.7 342 68.7
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.8e-83 314.3 484 49.6
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 5.3e-83 312.8 466 52.4
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 3.4e-82 310.1 427 56.7
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 4.5e-82 309.7 565 55.2
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 1.0e-78 298.5 452 56.9
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 3.0e-78 297.0 519 50.1
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 4.1e-75 286.6 509 47.5
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.8e-73 280.0 527 45.9
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.1e-69 268.5 569 36.0
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 2.8e-68 263.8 375 60.0
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 7.0e-67 259.2 491 49.1
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 7.0e-67 259.2 563 43.5
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 2.0e-66 257.7 508 48.6
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 2.6e-66 257.3 319 66.5
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 1.5e-64 251.5 286 52.1
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 5.7e-61 239.6 489 45.8
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 4.8e-60 236.5 505 33.7
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 9.1e-59 232.3 480 35.4
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.0e-57 228.8 282 48.9
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 1.0e-57 228.8 497 43.3
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 8.5e-57 225.7 286 45.5
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 9.4e-56 222.2 525 51.4
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 1.6e-55 221.5 251 51.4
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 6.1e-55 219.5 176 68.8
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 8.0e-55 219.2 147 83.7
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.7e-50 204.1 263 47.5
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-49 201.8 334 46.4
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 4.9e-44 183.3 183 53.6
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.2e-39 168.7 184 52.2
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 3.1e-38 164.1 264 68.2
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 4.0e-38 163.7 267 67.4
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 6.0e-34 149.8 99 74.7
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 4.7e-31 140.2 120 59.2
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 1.7e-28 131.7 239 58.2
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.2e-26 125.6 418 27.5
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 2.7e-26 124.4 87 74.7
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 2.3e-25 121.3 185 43.8
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 3.9e-25 120.6 115 58.3
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.2e-23 115.5 141 50.4
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 6.2e-23 113.2 388 47.4
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 3.1e-22 110.9 68 85.3
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 8.9e-22 109.4 155 40.6
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.4e-19 101.3 501 29.1
Nitab4.5_0009075g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.4e-19 101.3 66 78.8
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 2.4e-19 101.3 180 40.0
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-17 95.5 68 61.8
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 7.3e-16 89.7 201 36.3
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.4e-14 84.7 445 31.0
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 5.2e-14 83.6 99 52.5
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 2.6e-13 81.3 213 32.4
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 8.4e-12 76.3 67 53.7
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.9e-11 75.1 168 34.5
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.7e-10 71.2 101 42.6
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 2.5e-08 64.7 80 46.2
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.3e-08 63.9 48 62.5
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 7.3e-08 63.2 59 50.8
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 7.3e-08 63.2 133 34.6
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 1.4e-06 58.9 49 53.1
arahy.Tifrunner.gnm1.ann1.MX1HDN Arachis hypogaea HOM05D006674 ORTHO05D007954 2.4e-06 58.2 46 58.7
arahy.Tifrunner.gnm1.ann1.PS0MXP Arachis hypogaea HOM05D006674 ORTHO05D007954 2.4e-06 58.2 46 58.7
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 2.4e-06 58.2 49 57.1


User provided reference genes

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