Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 1.1e-273 946.0 485 100.0
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 3.4e-267 924.5 480 98.5
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 8.4e-173 610.9 516 64.9
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.9e-157 559.3 441 66.0
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 2.6e-142 509.6 398 65.3
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 1.2e-123 447.6 467 53.3
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 8.0e-123 444.9 380 61.8
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 7.0e-119 431.8 371 60.6
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 7.2e-116 421.8 413 55.9
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 8.0e-115 418.3 383 58.2
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 2.6e-113 413.3 326 64.7
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 4.4e-113 412.5 373 56.6
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 2.8e-112 409.8 351 58.4
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 1.4e-111 407.5 378 55.6
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 7.0e-111 405.2 423 53.9
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 7.7e-110 401.7 412 52.2
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.7e-109 400.6 380 53.9
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 2.9e-109 399.8 381 58.5
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 3.8e-109 399.4 391 53.7
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 3.8e-109 399.4 442 50.5
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 6.5e-109 398.7 391 54.0
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 8.6e-109 398.3 417 51.3
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 8.6e-109 398.3 446 49.6
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 3.3e-108 396.4 449 49.0
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 5.5e-108 395.6 468 49.4
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 2.8e-107 393.3 448 48.4
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 3.6e-107 392.9 410 51.7
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 8.0e-107 391.7 374 54.8
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 1.4e-106 391.0 394 53.3
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 3.0e-106 389.8 427 49.6
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 8.9e-106 388.3 380 53.7
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.2e-105 387.9 452 49.3
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 3.4e-105 386.3 483 47.2
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 4.4e-105 386.0 431 49.2
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 4.4e-105 386.0 352 55.7
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 5.7e-105 385.6 429 50.8
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 1.3e-104 384.4 409 50.4
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 8.3e-104 381.7 430 48.6
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 1.1e-103 381.3 409 50.1
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 1.8e-103 380.6 407 52.3
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 7.0e-103 378.6 358 55.6
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.7e-102 376.7 408 49.8
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 4.5e-102 375.9 408 49.8
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 5.9e-102 375.6 374 54.0
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 5.9e-102 375.6 437 48.1
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 2.8e-99 366.7 375 53.1
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 1.8e-98 364.0 399 51.9
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 4.0e-98 362.8 426 48.4
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 8.9e-98 361.7 367 51.8
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 1.5e-97 360.9 389 50.6
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 2.6e-97 360.1 389 50.4
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 2.2e-96 357.1 357 52.9
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 2.9e-96 356.7 432 48.1
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 4.9e-96 355.9 340 55.6
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.4e-95 353.6 402 50.5
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 4.1e-95 352.8 395 50.6
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 7.0e-95 352.1 461 46.4
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 9.2e-95 351.7 477 44.0
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 1.6e-94 350.9 333 54.7
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 1.7e-93 347.4 508 40.9
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 5.0e-93 345.9 450 45.8
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 6.6e-93 345.5 483 44.5
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 2.5e-92 343.6 335 54.0
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 2.5e-92 343.6 429 47.8
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 4.3e-92 342.8 466 43.6
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 5.6e-92 342.4 256 63.3
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 7.3e-92 342.0 402 47.8
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 2.3e-90 337.0 411 47.4
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 2.6e-89 333.6 311 55.6
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 3.4e-89 333.2 379 48.3
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 7.5e-89 332.0 377 50.7
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 9.2e-87 325.1 375 49.9
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 2.7e-86 323.6 222 72.1
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 4.6e-86 322.8 372 49.5
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 1.5e-84 317.8 256 60.9
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 1.5e-84 317.8 319 53.6
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 3.3e-84 316.6 379 48.8
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 3.3e-84 316.6 443 42.4
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 1.2e-83 314.7 402 47.8
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 4.7e-83 312.8 347 49.3
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 4.7e-83 312.8 319 53.3
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 6.2e-83 312.4 288 55.9
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.5e-81 307.8 464 42.2
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 4.6e-78 296.2 209 67.0
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 1.3e-77 294.7 301 52.2
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 2.1e-75 287.3 293 51.9
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 6.2e-75 285.8 351 49.9
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 1.1e-74 285.0 251 58.2
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 2.4e-71 273.9 293 52.9
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 3.2e-71 273.5 209 63.6
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 7.1e-71 272.3 354 43.8
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 3.9e-69 266.5 356 44.7
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.1e-63 248.4 318 47.5
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.3e-59 235.0 359 40.4
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 6.2e-59 232.6 257 46.3
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 1.4e-58 231.5 181 67.4
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 4.6e-54 216.5 267 40.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.8e-53 214.5 512 34.0
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 5.8e-49 199.5 272 45.2
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 9.9e-49 198.7 301 39.9
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 1.2e-46 191.8 180 51.7
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 7.9e-46 189.1 121 73.6
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 1.0e-45 188.7 117 74.4
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 6.0e-38 162.9 218 42.7
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 3.1e-34 150.6 172 46.5
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.1e-31 142.1 243 38.3
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 6.7e-29 132.9 411 29.0
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 2.1e-22 111.3 172 40.1


User provided reference genes

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