Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 7.1e-108 394.0 213 100.0
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.1e-105 386.7 213 98.1
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 2.8e-104 382.1 213 96.7
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 3.0e-90 335.5 213 83.1
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.3e-88 330.1 211 83.9
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 1.9e-73 279.6 204 73.0
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 7.9e-67 257.7 211 65.4
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 2.2e-64 249.6 200 68.5
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 4.8e-64 248.4 211 64.0
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 2.6e-62 242.7 213 64.8
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 8.5e-61 237.7 210 61.9
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.9e-60 236.5 211 62.1
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 1.9e-60 236.5 211 62.1
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.9e-60 236.5 211 60.2
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.5e-60 236.1 211 60.2
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 1.0e-58 230.7 209 61.7
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 3.0e-58 229.2 211 60.7
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 6.7e-58 228.0 211 58.8
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 1.1e-57 227.3 211 58.3
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 3.3e-57 225.7 211 58.8
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 3.3e-57 225.7 211 59.7
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 9.7e-57 224.2 215 57.2
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.8e-56 222.6 210 59.5
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 4.1e-55 218.8 210 58.6
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 1.6e-54 216.9 210 58.6
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 2.6e-54 216.1 212 58.0
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 4.5e-54 215.3 211 55.9
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 5.0e-53 211.8 213 55.9
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 6.5e-53 211.5 209 57.4
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 6.5e-53 211.5 211 55.5
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.1e-52 210.7 211 55.0
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 7.2e-52 208.0 202 58.9
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 4.7e-51 205.3 212 54.7
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 1.0e-50 204.1 211 55.5
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 1.4e-50 203.8 213 53.1
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 4.0e-50 202.2 211 54.5
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.0e-49 199.9 210 56.2
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 2.6e-49 199.5 209 52.6
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 3.3e-49 199.1 214 55.6
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 7.5e-49 198.0 211 54.0
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 9.7e-49 197.6 212 53.3
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 1.3e-48 197.2 212 53.8
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 2.2e-48 196.4 211 53.1
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 6.3e-48 194.9 213 54.9
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.4e-47 193.7 212 53.8
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.4e-47 193.7 209 51.7
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.4e-47 193.7 212 52.4
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 1.8e-47 193.4 212 54.2
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 2.4e-47 193.0 212 54.2
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 3.1e-47 192.6 214 51.4
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 4.1e-47 192.2 213 53.1
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 5.3e-47 191.8 212 53.8
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 5.3e-47 191.8 212 53.8
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 2.0e-46 189.9 211 51.7
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.0e-46 189.9 212 53.3
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 2.0e-46 189.9 212 52.8
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.7e-46 189.5 211 50.7
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 7.7e-46 188.0 212 52.8
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 1.0e-45 187.6 217 51.6
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 1.0e-45 187.6 211 51.2
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 1.0e-45 187.6 212 52.8
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 1.7e-45 186.8 211 52.6
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 1.7e-45 186.8 212 52.8
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 2.2e-45 186.4 211 52.1
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 6.5e-45 184.9 208 52.4
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 6.5e-45 184.9 211 54.5
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 1.5e-44 183.7 215 49.3
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 1.9e-44 183.3 212 50.0
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 2.5e-44 183.0 212 52.8
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 4.2e-44 182.2 212 52.4
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 4.2e-44 182.2 215 47.9
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 5.5e-44 181.8 211 50.7
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 1.6e-43 180.3 208 51.4
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.6e-43 180.3 211 50.7
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.7e-43 179.5 209 50.7
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 4.7e-43 178.7 218 50.9
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 6.1e-43 178.3 207 52.7
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 2.3e-42 176.4 211 50.2
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 3.0e-42 176.0 219 49.3
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 3.0e-42 176.0 212 49.5
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 5.2e-42 175.3 210 48.1
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 5.2e-42 175.3 201 50.2
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 5.2e-42 175.3 213 50.7
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 6.8e-42 174.9 215 52.1
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 1.5e-41 173.7 213 46.9
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.5e-41 173.7 212 51.4
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 2.0e-41 173.3 215 49.3
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 3.4e-41 172.6 198 52.0
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 3.4e-41 172.6 213 49.3
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 4.4e-41 172.2 212 47.2
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 9.8e-41 171.0 200 51.0
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 9.8e-41 171.0 209 52.2
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 1.3e-40 170.6 202 50.5
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 1.3e-40 170.6 211 48.3
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 2.2e-40 169.9 208 49.5
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 4.8e-40 168.7 206 49.0
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 8.3e-40 167.9 215 47.0
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 1.4e-39 167.2 210 50.0
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.4e-39 166.4 211 46.4
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 2.4e-39 166.4 209 47.4
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 2.4e-39 166.4 199 48.7
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 3.1e-39 166.0 197 51.8
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 3.1e-39 166.0 197 51.8
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 4.1e-39 165.6 215 46.5
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 7.0e-39 164.9 210 47.1
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.6e-38 163.7 197 50.8
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 1.6e-38 163.7 214 48.1
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 2.7e-38 162.9 175 54.3
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 3.5e-38 162.5 197 50.8
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 3.5e-38 162.5 217 46.5
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 4.5e-38 162.2 199 48.7
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.7e-37 160.2 212 45.3
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 3.8e-37 159.1 213 45.1
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 8.5e-37 157.9 213 45.1
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 1.1e-36 157.5 213 45.5
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.1e-36 157.5 200 47.5
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.5e-36 157.1 209 45.5
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 4.2e-36 155.6 210 45.2
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 7.2e-36 154.8 194 49.0
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 9.4e-36 154.5 215 44.7
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 9.4e-36 154.5 197 48.2
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 9.4e-36 154.5 209 45.5
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 2.1e-35 153.3 213 44.1
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 3.6e-35 152.5 216 44.9
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 3.6e-35 152.5 215 45.6
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.8e-34 150.2 207 45.4
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 2.6e-33 146.4 211 42.7
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 2.6e-33 146.4 213 44.1
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 9.8e-33 144.4 139 59.0
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 2.8e-32 142.9 216 43.1
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 4.9e-32 142.1 186 46.8
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.8e-31 140.2 195 45.1
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 1.8e-31 140.2 208 42.3
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.1e-31 139.4 209 42.6
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 9.2e-31 137.9 215 40.9
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 1.2e-30 137.5 214 41.6
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 7.7e-30 134.8 208 43.3
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 1.0e-29 134.4 211 41.2
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 1.3e-29 134.0 143 52.4
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 2.9e-29 132.9 207 40.6
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.3e-28 129.4 194 44.8
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 5.6e-28 128.6 163 46.6
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.8e-27 126.3 219 40.2
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.3e-24 117.5 179 43.0
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 1.8e-23 113.6 183 38.8
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 5.4e-23 112.1 206 36.4
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 5.4e-23 112.1 219 37.9
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.9e-21 105.9 136 46.3
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 5.0e-21 105.5 118 50.8
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 6.6e-21 105.1 117 52.1
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.3e-20 102.4 137 45.3
FAN28G2101 Fragaria x ananassa HOM05D004648 ORTHO05D005782 1.9e-07 60.5 60 56.7
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 3.2e-07 59.7 80 43.8


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