Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.1e-63 246.5 124 100.0
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 7.9e-43 177.2 94 97.9
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 1.4e-42 176.4 94 96.8
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.7e-35 152.1 94 86.2
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.7e-35 151.4 96 82.3
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 5.0e-29 131.3 99 74.7
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 6.1e-27 124.4 92 76.1
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 4.0e-26 121.7 87 74.7
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 1.8e-23 112.8 87 70.1
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.2e-22 110.2 87 73.6
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.7e-22 109.0 101 58.4
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.0e-21 107.1 87 69.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.3e-21 106.7 99 62.6
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.2e-21 105.9 87 70.1
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 6.5e-21 104.4 95 66.3
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.5e-21 104.4 90 64.4
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.5e-20 102.4 87 65.5
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 4.2e-20 101.7 102 63.7
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 4.2e-20 101.7 104 62.5
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 4.2e-20 101.7 90 66.7
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 9.4e-20 100.5 88 65.9
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.6e-19 99.8 87 67.8
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 2.1e-19 99.4 88 68.2
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 2.1e-19 99.4 88 68.2
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.7e-19 99.0 87 66.7
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 8.0e-19 97.4 88 64.8
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.0e-18 97.1 87 66.7
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.0e-18 97.1 87 69.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.2e-17 93.6 88 64.8
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.2e-17 93.6 87 64.4
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.2e-17 93.6 87 66.7
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.0e-17 92.8 89 58.4
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.0e-17 92.8 89 58.4
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 2.0e-17 92.8 87 64.4
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 3.4e-17 92.0 89 58.4
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 5.7e-17 91.3 95 60.0
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 5.7e-17 91.3 87 63.2
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.7e-17 91.3 87 63.2
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 5.7e-17 91.3 87 64.4
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 5.7e-17 91.3 87 64.4
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 5.7e-17 91.3 87 67.8
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 7.5e-17 90.9 87 63.2
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 7.5e-17 90.9 87 63.2
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 9.8e-17 90.5 87 64.4
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 9.8e-17 90.5 87 60.9
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.3e-16 90.1 89 57.3
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 1.3e-16 90.1 95 58.9
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 3.7e-16 88.6 89 59.6
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 6.3e-16 87.8 101 52.5
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.4e-15 86.7 102 53.9
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.8e-15 86.3 89 57.3
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 2.4e-15 85.9 90 58.9
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 2.4e-15 85.9 95 53.7
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.1e-15 85.5 87 60.9
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 7.0e-15 84.3 89 57.3
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 7.0e-15 84.3 89 60.7
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 9.1e-15 84.0 89 56.2
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 1.6e-14 83.2 90 58.9
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.6e-14 83.2 70 67.1
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 2.0e-14 82.8 89 57.3
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 3.5e-14 82.0 102 52.0
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 4.5e-14 81.6 100 53.0
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.3e-13 80.1 70 67.1
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.7e-13 79.7 87 57.5
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.1e-12 77.0 91 54.9
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 2.5e-12 75.9 63 68.3
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 7.2e-12 74.3 68 64.7
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 2.1e-11 72.8 57 71.9
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 4.7e-11 71.6 104 47.1
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 6.1e-11 71.2 68 63.2
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 3.0e-10 68.9 55 72.7
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 8.8e-10 67.4 64 60.9
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 4.4e-09 65.1 55 67.3
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.4e-07 60.1 97 47.4
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 5.4e-07 58.2 50 66.0
Migut.H02288 Erythranthe guttata HOM05D007889 ORTHO05D009987 9.2e-07 57.4 88 43.2


User provided reference genes

Program Settings