Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 2.6e-141 505.4 252 100.0
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 4.0e-134 481.5 252 95.6
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 1.3e-124 449.9 260 86.5
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 1.7e-121 439.5 256 87.5
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.5e-120 435.6 254 85.8
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 9.9e-117 423.7 243 88.5
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 6.0e-114 414.5 213 97.7
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 2.3e-105 386.0 243 80.7
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.2e-100 369.4 243 77.4
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 4.9e-100 368.2 244 75.0
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 1.4e-99 366.7 237 76.8
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 5.4e-99 364.8 242 75.6
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 9.3e-99 364.0 231 75.8
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 9.3e-99 364.0 229 79.0
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 9.3e-99 364.0 229 79.0
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 6.0e-98 361.3 239 74.9
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 1.8e-97 359.8 216 81.5
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 3.9e-97 358.6 243 75.3
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 1.9e-96 356.3 199 86.9
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.5e-96 355.9 199 86.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 3.3e-96 355.5 250 75.2
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 5.6e-96 354.8 230 76.1
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 7.4e-96 354.4 247 73.7
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.6e-95 353.2 208 82.7
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 3.7e-95 352.1 238 73.5
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 3.7e-95 352.1 238 73.9
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 4.8e-95 351.7 211 81.5
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.8e-95 351.7 242 74.0
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 1.8e-94 349.7 213 79.8
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 6.9e-94 347.8 238 72.3
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 6.9e-94 347.8 215 79.1
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 6.9e-94 347.8 198 84.3
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 1.5e-93 346.7 215 78.6
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 1.5e-93 346.7 232 72.8
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.6e-93 345.9 205 81.0
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 3.4e-93 345.5 243 71.2
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 4.5e-93 345.1 215 78.1
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 4.5e-93 345.1 215 77.2
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 5.8e-93 344.7 231 70.6
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 5.8e-93 344.7 205 80.0
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 9.9e-93 344.0 208 76.4
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 1.3e-92 343.6 214 75.2
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 6.4e-92 341.3 208 80.3
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.1e-91 340.5 239 71.1
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 1.4e-91 340.1 207 78.7
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 4.2e-91 338.6 229 74.2
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 7.1e-91 337.8 255 67.5
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 9.3e-91 337.4 258 67.4
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 9.3e-91 337.4 201 77.1
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 9.3e-91 337.4 198 80.8
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.2e-90 337.0 207 75.8
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 1.6e-90 336.7 199 81.9
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 2.7e-90 335.9 207 75.4
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 6.0e-90 334.7 198 79.8
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.0e-89 334.0 211 77.3
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 3.0e-89 332.4 197 80.2
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 8.7e-89 330.9 196 79.1
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 1.1e-88 330.5 204 78.9
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 3.3e-88 328.9 198 79.3
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 7.4e-88 327.8 258 65.5
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 1.6e-87 326.6 213 72.8
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 2.1e-87 326.2 228 71.9
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 2.1e-87 326.2 241 69.3
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 1.1e-86 323.9 230 70.9
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.4e-86 323.6 207 76.3
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 1.4e-86 323.6 237 67.1
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.8e-86 323.2 258 65.9
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 3.1e-86 322.4 248 66.5
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 3.4e-85 318.9 229 71.2
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 4.5e-85 318.5 222 70.3
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.3e-84 317.0 205 74.6
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 2.9e-84 315.8 211 73.0
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 2.9e-84 315.8 211 73.0
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 2.9e-84 315.8 221 70.6
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 6.5e-84 314.7 204 75.5
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.5e-83 312.8 211 73.5
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 3.2e-83 312.4 211 72.0
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 4.2e-83 312.0 211 72.0
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 4.2e-83 312.0 215 71.6
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 5.5e-83 311.6 211 72.0
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 5.5e-83 311.6 226 65.9
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.6e-82 310.1 217 69.1
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 1.0e-81 307.4 198 71.2
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 2.3e-81 306.2 208 73.1
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 3.9e-81 305.4 229 67.7
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 2.2e-79 299.7 229 68.6
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.7e-76 290.0 201 70.1
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 2.2e-76 289.7 191 70.7
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 2.9e-76 289.3 206 67.0
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 4.2e-75 285.4 194 67.0
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.0e-64 250.0 147 81.0
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 4.4e-64 248.8 218 56.4
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 5.9e-61 238.4 153 78.4
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.3e-60 237.3 239 54.4
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 2.2e-60 236.5 133 87.2
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 3.6e-58 229.2 239 54.0
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.6e-53 213.8 144 74.3
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 9.4e-51 204.5 156 64.7
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.3e-49 199.9 245 48.2
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 2.2e-47 193.4 185 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 6.5e-44 181.8 152 55.9
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.0e-41 174.5 131 64.1
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 7.5e-40 168.3 199 40.7
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 3.7e-39 166.0 106 77.4
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 3.1e-38 162.9 97 75.3
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.7e-36 157.1 112 67.9
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.6e-36 155.2 107 73.8
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.0e-33 146.4 122 60.7
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.4e-32 142.5 98 68.4
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 5.7e-32 142.1 99 72.7
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.1e-30 137.9 144 47.2
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 1.6e-29 134.0 135 54.8
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 6.6e-28 128.6 202 36.1
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 7.3e-27 125.2 211 36.5
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 1.2e-21 107.8 108 57.4
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 6.0e-21 105.5 71 66.2
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.2e-18 97.8 53 81.1
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.7e-15 87.4 51 80.4
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.3e-12 77.8 64 57.8
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 1.3e-12 77.8 60 58.3
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 6.6e-12 75.5 55 56.4
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 8.6e-12 75.1 51 62.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.1e-09 66.6 68 54.4
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 4.0e-09 66.2 43 76.7
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 4.9e-07 59.3 51 64.7


User provided reference genes

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