Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g009030.1 Solanum lycopersicum HOM05D007581 ORTHO05D009250 3.6e-49 198.4 133 100.0
Sopen11g004800 Solanum pennellii HOM05D007581 ORTHO05D009250 4.1e-45 184.9 136 94.1
PGSC0003DMG400016228 Solanum tuberosum HOM05D007581 ORTHO05D009250 9.1e-45 183.7 136 91.9
Nitab4.5_0000079g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 5.3e-37 157.9 133 78.9
Peaxi162Scf00078g01222 Petunia axillaris HOM05D007581 ORTHO05D009250 3.5e-36 155.2 136 75.0
Nitab4.5_0006526g0010 Nicotiana tabacum HOM05D000128 ORTHO05D000059 2.9e-35 152.1 133 76.7
CAN.G630.61 Capsicum annuum HOM05D007581 ORTHO05D009250 2.7e-33 145.6 136 73.5
CSS0015328 Camellia sinensis var. sinensis HOM05D007581 ORTHO05D009250 8.3e-30 134.0 135 65.9
Dinv37395 Davidia involucrata HOM05D007581 ORTHO05D009250 3.2e-26 122.1 135 68.1
ECA247G3877 Erigeron canadensis HOM05D007581 ORTHO05D009250 4.2e-26 121.7 133 66.2
SGA_v2.0_scaffold118G32651 Striga asiatica HOM05D007581 ORTHO05D009250 7.2e-26 120.9 130 61.5
GSVIVG01037110001 Vitis vinifera HOM05D007581 ORTHO05D009250 2.7e-25 119.0 138 63.0
EL10Ac1g01297 Beta vulgaris HOM05D007581 ORTHO05D009250 3.6e-25 118.6 136 65.4
Haze_14032 Corylus avellana HOM05D007581 ORTHO05D009250 4.7e-25 118.2 134 65.7
Aqoxy6G00030 Aquilegia oxysepala HOM05D007581 ORTHO05D009250 6.8e-24 114.4 133 61.7
Phvul.004G128300 Phaseolus vulgaris HOM05D007581 ORTHO05D009250 1.7e-22 109.8 131 58.0
Thhalv10029062m.g Eutrema salsugineum HOM05D007581 ORTHO05D009250 2.2e-22 109.4 128 65.6
AT4G10330 Arabidopsis thaliana HOM05D007581 ORTHO05D009250 2.8e-22 109.0 126 62.7
Eucgr.F04100 Eucalyptus grandis HOM05D007581 ORTHO05D009250 4.8e-22 108.2 129 62.8
Medtr6g060172 Medicago truncatula HOM05D007581 ORTHO05D009250 6.3e-22 107.8 134 57.5
FAN19G1324 Fragaria x ananassa HOM05D007581 ORTHO05D009250 1.1e-21 107.1 137 56.2
Lj2g0009073 Lotus japonicus HOM05D007581 ORTHO05D009250 1.1e-21 107.1 129 65.9
Sc26g0002080 Simmondsia chinensis HOM05D007581 ORTHO05D009250 1.8e-21 106.3 132 62.9
Migut.C01409 Erythranthe guttata HOM05D007581 ORTHO05D009250 2.4e-21 105.9 139 63.3
FvH4_2g00130 Fragaria vesca HOM05D007581 ORTHO05D009250 3.1e-21 105.5 135 59.3
FAN24G1736 Fragaria x ananassa HOM05D007581 ORTHO05D009250 3.1e-21 105.5 135 59.3
Sp6g07100 Schrenkiella parvula HOM05D007581 ORTHO05D009250 7.0e-21 104.4 128 63.3
BcaB05g23909 Brassica carinata HOM05D007581 ORTHO05D009250 9.1e-21 104.0 130 61.5
Aa31LG9G11680 Aethionema arabicum HOM05D007581 ORTHO05D009250 1.2e-20 103.6 130 58.5
BolC2t10277H Brassica oleracea HOM05D007581 ORTHO05D009250 1.6e-20 103.2 130 63.1
CiPaw.04G007300 Carya illinoinensis HOM05D007581 ORTHO05D009250 1.6e-20 103.2 131 62.6
Potri.019G063300 Populus trichocarpa HOM05D007581 ORTHO05D009250 1.6e-20 103.2 130 56.2
TWI18G0093 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 2.7e-20 102.4 128 63.3
Glyma.16G205300 Glycine max HOM05D007581 ORTHO05D009250 4.5e-20 101.7 131 55.0
Lsat_1_v5_gn_1_24761 Lactuca sativa HOM05D007581 ORTHO05D009250 5.9e-20 101.3 130 61.5
MD00G1103300 Malus domestica HOM05D007581 ORTHO05D009250 7.7e-20 100.9 139 51.1
Lalb_Chr02g0149891 Lupinus albus HOM05D007581 ORTHO05D009250 1.0e-19 100.5 135 63.0
Cc10_g16220 Coffea canephora HOM05D007581 ORTHO05D009250 1.3e-19 100.1 124 66.1
Manes.15G183800 Manihot esculenta HOM05D007581 ORTHO05D009250 1.7e-19 99.8 132 56.8
Glyma.09G154800 Glycine max HOM05D007581 ORTHO05D009250 2.3e-19 99.4 131 59.5
Sabra19G0076500 Salix brachista HOM05D007581 ORTHO05D009250 2.3e-19 99.4 131 60.3
Sabra19G0080300 Salix brachista HOM05D007581 ORTHO05D009250 2.3e-19 99.4 131 60.3
Atru.chr13.2628 Acer truncatum HOM05D007581 ORTHO05D009250 8.6e-19 97.4 130 56.2
Prupe.8G001100 Prunus persica HOM05D007581 ORTHO05D009250 8.6e-19 97.4 138 50.0
TAR628G1203 Trochodendron aralioides HOM05D007581 ORTHO05D009250 8.6e-19 97.4 133 61.7
CsaV3_5G039340 Cucumis sativus L. HOM05D007581 ORTHO05D009250 1.1e-18 97.1 140 52.1
CANSAT25G1375 Cannabis sativa HOM05D007581 ORTHO05D009250 1.9e-18 96.3 137 56.2
CANSAT25G2017 Cannabis sativa HOM05D007581 ORTHO05D009250 1.9e-18 96.3 137 56.2
ClCG08G001940 Citrullus lanatus HOM05D007581 ORTHO05D009250 2.5e-18 95.9 133 54.9
PSO210G2853 Papaver somniferum HOM05D007581 ORTHO05D009250 3.3e-18 95.5 131 60.3
MELO3C022112.2 Cucumis melo HOM05D007581 ORTHO05D009250 4.2e-18 95.1 140 51.4
Gohir.D08G248900 Gossypium hirsutum HOM05D007581 ORTHO05D009250 4.2e-18 95.1 129 52.7
BcaC03g16403 Brassica carinata HOM05D007581 ORTHO05D009250 7.2e-18 94.4 130 61.5
A02p26660 Brassica napus HOM05D007581 ORTHO05D009250 7.2e-18 94.4 130 61.5
C02p42350 Brassica napus HOM05D007581 ORTHO05D009250 7.2e-18 94.4 130 61.5
BraA02t07670Z Brassica rapa HOM05D007581 ORTHO05D009250 7.2e-18 94.4 130 61.5
Sed0022412 Sechium edule HOM05D007581 ORTHO05D009250 9.5e-18 94.0 133 57.1
MSTRG.25512 Avicennia marina HOM05D007581 ORTHO05D009250 1.6e-17 93.2 135 60.7
MBI06_g43033_MAGBIO Magnolia biondii HOM05D007581 ORTHO05D009250 1.6e-17 93.2 131 58.8
QL09p000889 Quercus lobata HOM05D007581 ORTHO05D009250 2.8e-17 92.4 127 59.8
Duzib116G0131 Durio zibethinus HOM05D007581 ORTHO05D009250 3.6e-17 92.0 135 56.3
Hund16921 Selenicereus undatus HOM05D007581 ORTHO05D009250 6.1e-17 91.3 137 59.9
AL6G44200 Arabidopsis lyrata HOM05D007581 ORTHO05D009250 1.4e-16 90.1 126 61.1
Ca_02136_v3 Cicer arietinum L. HOM05D007581 ORTHO05D009250 1.4e-16 90.1 134 59.0
Nn5g27166 Nelumbo nucifera HOM05D007581 ORTHO05D009250 4.0e-16 88.6 130 60.0
THA.LOC104815611 Tarenaya hassleriana HOM05D007581 ORTHO05D009250 8.9e-16 87.4 128 59.4
HPP92_009197 Vanilla planifolia HOM05D007581 ORTHO05D009250 8.9e-16 87.4 132 57.6
Carub.0006s2893 Capsella rubella HOM05D007581 ORTHO05D009250 2.0e-15 86.3 126 54.8
Os01g0886500 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 4.4e-15 85.1 123 52.8
RcHm_v2.0_Chr6g0249391 Rosa chinensis HOM05D007581 ORTHO05D009250 5.7e-15 84.7 136 54.4
Gorai.004G265500 Gossypium raimondii HOM05D007581 ORTHO05D009250 2.8e-14 82.4 129 53.5
Lalb_Chr01g0008751 Lupinus albus HOM05D007581 ORTHO05D009250 4.9e-14 81.6 134 54.5
Ciclev10022815m.g Citrus clementina HOM05D007581 ORTHO05D009250 1.8e-13 79.7 134 56.7
Gohir.A08G228600 Gossypium hirsutum HOM05D007581 ORTHO05D009250 2.4e-13 79.3 127 53.5
CARHR256310 Cardamine hirsuta HOM05D007581 ORTHO05D009250 5.4e-13 78.2 127 51.2
Os11g0242700 Oryza sativa ssp. japonica HOM05D007581 ORTHO05D009250 2.7e-12 75.9 130 55.4
DCAR_014049 Daucus carota HOM05D000133 ORTHO05D000259 3.5e-12 75.5 162 48.1
TPR.G20128 Trifolium pratense HOM05D007581 ORTHO05D009250 4.5e-12 75.1 130 56.2
ATR1089G122 Amborella trichopoda HOM05D007581 ORTHO05D009250 1.0e-11 73.9 136 52.2
MD05G1000400 Malus domestica HOM05D007581 ORTHO05D009250 1.7e-11 73.2 89 65.2
Zm00001eb145430 Zea mays HOM05D007581 ORTHO05D009250 1.7e-11 73.2 136 52.2
unitig_578.g16109 Utricularia gibba HOM05D007581 ORTHO05D009250 2.9e-11 72.4 132 53.0
Oeu028611.1 Olea europaea HOM05D007581 ORTHO05D009250 6.6e-11 71.2 88 70.5
Psat1g111920 Pisum sativum HOM05D007581 ORTHO05D009250 7.3e-10 67.8 117 50.4
Zm00001eb168090 Zea mays HOM05D007581 ORTHO05D009250 7.3e-10 67.8 130 53.8
PSO761G0508 Papaver somniferum HOM05D007581 ORTHO05D009250 9.5e-10 67.4 97 64.9
Cpa.g.sc21.238 Carica papaya HOM05D007581 ORTHO05D009250 3.6e-09 65.5 89 55.1
AUR62013400 Chenopodium quinoa HOM05D007581 ORTHO05D009250 4.7e-09 65.1 165 45.5
HanXRQChr04g0102981 Helianthus annuus HOM05D007581 ORTHO05D009250 1.4e-08 63.5 91 63.7
VMungo0464G1076 Vigna mungo HOM05D007581 ORTHO05D009250 2.3e-08 62.8 113 52.2
TWI75G0477 Tripterygium wilfordii HOM05D007581 ORTHO05D009250 2.6e-07 59.3 87 70.1
MD02G1202800 Malus domestica HOM05D007581 ORTHO05D009250 5.8e-07 58.2 91 49.5
MD11G1234100 Malus domestica HOM05D007581 ORTHO05D009250 1.7e-06 56.6 55 45.5
COL.COLO4_25109 Corchorus olitorius HOM05D007581 ORTHO05D009250 8.3e-06 54.3 88 58.0


User provided reference genes

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