Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g008790.3 Solanum lycopersicum HOM05D006082 ORTHO05D007616 4.6e-135 484.6 247 100.0
Sopen11g004570 Solanum pennellii HOM05D006082 ORTHO05D007616 1.8e-134 482.6 247 99.6
PGSC0003DMG400016241 Solanum tuberosum HOM05D006082 ORTHO05D007616 9.6e-133 476.9 247 98.4
CAN.G691.19 Capsicum annuum HOM05D006082 ORTHO05D007616 4.5e-130 468.0 247 96.0
Nitab4.5_0000743g0220 Nicotiana tabacum HOM05D006082 ORTHO05D007616 8.8e-102 374.0 249 81.1
Peaxi162Scf00090g00046 Petunia axillaris HOM05D006082 ORTHO05D007616 6.5e-89 331.3 278 67.6
Nitab4.5_0001677g0060 Nicotiana tabacum HOM05D006082 ORTHO05D007616 1.4e-86 323.6 299 63.5
MSTRG.15681 Avicennia marina HOM05D006082 ORTHO05D007616 1.2e-71 273.9 228 61.8
Cc03_g11310 Coffea canephora HOM05D006082 ORTHO05D007616 8.0e-71 271.2 228 59.2
Psat3g079600 Pisum sativum HOM05D006082 ORTHO05D007616 1.3e-68 263.8 234 56.8
Migut.L00265 Erythranthe guttata HOM05D006082 ORTHO05D007616 2.9e-68 262.7 233 59.2
TPR.G16094 Trifolium pratense HOM05D006082 ORTHO05D007616 3.7e-68 262.3 223 58.3
HanXRQChr14g0454421 Helianthus annuus HOM05D006082 ORTHO05D007616 3.2e-67 259.2 225 58.7
TAR375G0813 Trochodendron aralioides HOM05D006082 ORTHO05D007616 3.5e-66 255.8 220 61.4
GSVIVG01027464001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.5e-66 255.8 220 60.0
Ciclev10022037m.g Citrus clementina HOM05D006082 ORTHO05D007616 4.6e-66 255.4 225 56.9
ECA238G2330 Erigeron canadensis HOM05D006082 ORTHO05D007616 8.6e-65 251.1 226 56.2
Lalb_Chr17g0343121 Lupinus albus HOM05D006082 ORTHO05D007616 8.6e-65 251.1 224 55.8
Glyma.03G126300 Glycine max HOM05D006082 ORTHO05D007616 1.1e-64 250.8 223 56.5
Lj1g0004702 Lotus japonicus HOM05D006082 ORTHO05D007616 1.1e-64 250.8 222 56.3
Medtr7g089460 Medicago truncatula HOM05D006082 ORTHO05D007616 1.9e-64 250.0 223 55.6
QL01p017595 Quercus lobata HOM05D006082 ORTHO05D007616 3.3e-64 249.2 221 56.6
Glyma.19G129400 Glycine max HOM05D006082 ORTHO05D007616 7.3e-64 248.1 222 56.3
Gohir.A11G102200 Gossypium hirsutum HOM05D006082 ORTHO05D007616 7.3e-64 248.1 223 57.8
Potri.014G107300 Populus trichocarpa HOM05D006082 ORTHO05D007616 9.5e-64 247.7 221 58.8
Gorai.007G114300 Gossypium raimondii HOM05D006082 ORTHO05D007616 2.1e-63 246.5 223 57.4
Phvul.001G121700 Phaseolus vulgaris HOM05D006082 ORTHO05D007616 4.7e-63 245.4 223 55.6
Dinv04258 Davidia involucrata HOM05D006082 ORTHO05D007616 1.8e-62 243.4 225 57.8
Atru.chr5.795 Acer truncatum HOM05D006082 ORTHO05D007616 3.1e-62 242.7 222 54.5
Duzib133G0864 Durio zibethinus HOM05D006082 ORTHO05D007616 3.4e-61 239.2 223 55.2
Thecc.01G331100 Theobroma cacao HOM05D006082 ORTHO05D007616 1.3e-60 237.3 223 56.1
PGR031G0479 Punica granatum HOM05D006082 ORTHO05D007616 1.7e-60 236.9 238 55.5
TWI14G1025 Tripterygium wilfordii HOM05D006082 ORTHO05D007616 2.2e-60 236.5 223 56.1
MD01G1091900 Malus domestica HOM05D006082 ORTHO05D007616 1.1e-59 234.2 223 56.5
Prupe.2G201100 Prunus persica HOM05D006082 ORTHO05D007616 1.9e-59 233.4 223 57.4
Ca_08380_v3 Cicer arietinum L. HOM05D006082 ORTHO05D007616 2.4e-59 233.0 196 60.7
arahy.Tifrunner.gnm1.ann1.6SRZ86 Arachis hypogaea HOM05D006082 ORTHO05D007616 7.1e-59 231.5 225 55.6
ATR1136G056 Amborella trichopoda HOM05D006082 ORTHO05D007616 9.2e-59 231.1 222 55.0
FAN06G3489 Fragaria x ananassa HOM05D006082 ORTHO05D007616 9.2e-59 231.1 223 56.5
arahy.Tifrunner.gnm1.ann1.9R6DDK Arachis hypogaea HOM05D006082 ORTHO05D007616 1.2e-58 230.7 225 56.0
Haze_15761 Corylus avellana HOM05D006082 ORTHO05D007616 1.2e-58 230.7 225 54.7
Eucgr.G03261 Eucalyptus grandis HOM05D006082 ORTHO05D007616 1.6e-58 230.3 222 56.3
FvH4_7g17940 Fragaria vesca HOM05D006082 ORTHO05D007616 4.6e-58 228.8 223 56.1
Actinidia33031 Actinidia chinensis HOM05D006082 ORTHO05D007616 1.3e-57 227.3 224 54.0
CsaV3_3G007110 Cucumis sativus L. HOM05D006082 ORTHO05D007616 1.3e-57 227.3 222 50.9
FAN06G1515 Fragaria x ananassa HOM05D006082 ORTHO05D007616 5.1e-57 225.3 229 55.0
MELO3C005932.2 Cucumis melo HOM05D006082 ORTHO05D007616 1.5e-56 223.8 238 49.6
RcHm_v2.0_Chr1g0361381 Rosa chinensis HOM05D006082 ORTHO05D007616 1.5e-56 223.8 223 55.2
C09p01160 Brassica napus HOM05D006082 ORTHO05D007616 3.6e-55 219.2 224 54.5
A09p01070 Brassica napus HOM05D006082 ORTHO05D007616 6.2e-55 218.4 224 54.5
CANSAT56G1086 Cannabis sativa HOM05D006082 ORTHO05D007616 8.1e-55 218.0 205 56.6
FAN03G2817 Fragaria x ananassa HOM05D006082 ORTHO05D007616 8.1e-55 218.0 235 53.2
Aqoxy5G00354 Aquilegia oxysepala HOM05D006082 ORTHO05D007616 3.1e-54 216.1 225 52.0
Nn1g00467 Nelumbo nucifera HOM05D006082 ORTHO05D007616 4.0e-54 215.7 217 55.8
CARHR001490 Cardamine hirsuta HOM05D006082 ORTHO05D007616 8.9e-54 214.5 221 51.6
A10p00890 Brassica napus HOM05D006082 ORTHO05D007616 3.4e-53 212.6 221 52.5
PSO675G6409 Papaver somniferum HOM05D006082 ORTHO05D007616 3.4e-53 212.6 236 49.2
AL1G11510 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 5.8e-53 211.8 221 51.6
Sp1g01290 Schrenkiella parvula HOM05D006082 ORTHO05D007616 5.8e-53 211.8 221 50.2
BraA10t42369Z Brassica rapa HOM05D006082 ORTHO05D007616 7.6e-53 211.5 221 52.0
BcaB03g13546 Brassica carinata HOM05D006082 ORTHO05D007616 2.2e-52 209.9 221 51.1
ClCG05G000050 Citrullus lanatus HOM05D006082 ORTHO05D007616 2.2e-52 209.9 235 48.5
Sp6g01450 Schrenkiella parvula HOM05D006082 ORTHO05D007616 2.9e-52 209.5 223 52.9
Carub.0006s3568 Capsella rubella HOM05D006082 ORTHO05D007616 3.7e-52 209.1 228 50.9
Thhalv10008618m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 3.7e-52 209.1 219 52.1
AL6G51830 Arabidopsis lyrata HOM05D006082 ORTHO05D007616 4.9e-52 208.8 219 51.6
PSO675G6921 Papaver somniferum HOM05D006082 ORTHO05D007616 8.4e-52 208.0 236 48.3
CDE08G0270 Ceratophyllum demersum HOM05D006082 ORTHO05D007616 1.1e-51 207.6 225 47.6
Carub.0001s0120 Capsella rubella HOM05D006082 ORTHO05D007616 1.9e-51 206.8 221 50.7
Thhalv10028930m.g Eutrema salsugineum HOM05D006082 ORTHO05D007616 2.4e-51 206.5 225 50.7
CARHR250170 Cardamine hirsuta HOM05D006082 ORTHO05D007616 9.2e-51 204.5 225 49.8
BolC5t28877H Brassica oleracea HOM05D006082 ORTHO05D007616 1.6e-50 203.8 221 51.1
BolC9t53049H Brassica oleracea HOM05D006082 ORTHO05D007616 1.6e-50 203.8 253 48.2
BraA09t35778Z Brassica rapa HOM05D006082 ORTHO05D007616 2.1e-50 203.4 252 48.4
THA.LOC104815904 Tarenaya hassleriana HOM05D006082 ORTHO05D007616 2.7e-50 203.0 220 47.3
C05p00920 Brassica napus HOM05D006082 ORTHO05D007616 4.6e-50 202.2 221 50.7
Ah.01g019340 Amaranthus hybridus HOM05D006082 ORTHO05D007616 1.3e-49 200.7 218 50.0
AUR62016743 Chenopodium quinoa HOM05D006082 ORTHO05D007616 1.7e-49 200.3 218 49.5
Gohir.D11G106800 Gossypium hirsutum HOM05D006082 ORTHO05D007616 3.0e-49 199.5 223 50.2
FAN10G2982 Fragaria x ananassa HOM05D006082 ORTHO05D007616 1.5e-48 197.2 236 50.0
Manes.05G014900 Manihot esculenta HOM05D006082 ORTHO05D007616 1.5e-48 197.2 172 55.8
Lsat_1_v5_gn_2_88861 Lactuca sativa HOM05D006082 ORTHO05D007616 5.2e-46 188.7 237 46.8
HPP92_015681 Vanilla planifolia HOM05D006082 ORTHO05D007616 3.4e-45 186.0 217 47.0
Os03g0784300 Oryza sativa ssp. japonica HOM05D006082 ORTHO05D007616 4.4e-45 185.7 223 45.7
CANSAT56G0035 Cannabis sativa HOM05D006082 ORTHO05D007616 5.8e-45 185.3 205 51.7
unitig_899.g14456 Utricularia gibba HOM05D003044 ORTHO05D007616 7.6e-45 184.9 207 49.8
Aa31LG1G10340 Aethionema arabicum HOM05D006082 ORTHO05D007616 2.2e-44 183.3 231 47.2
AT4G01510 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 2.4e-43 179.9 192 53.1
MBI06_g35217_MAGBIO Magnolia biondii HOM05D006082 ORTHO05D007616 1.6e-42 177.2 222 49.5
SEGI_04405 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 1.7e-41 173.7 230 41.3
Aa31LG5G1260 Aethionema arabicum HOM05D006082 ORTHO05D007616 3.9e-41 172.6 220 43.6
FAN01G2730 Fragaria x ananassa HOM05D006082 ORTHO05D007616 4.3e-40 169.1 221 49.8
COL.COLO4_23067 Corchorus olitorius HOM05D006082 ORTHO05D007616 1.6e-39 167.2 152 55.9
CiPaw.01G087100 Carya illinoinensis HOM05D006082 ORTHO05D007616 8.1e-39 164.9 179 51.4
Sc24g0001860 Simmondsia chinensis HOM05D006082 ORTHO05D007616 4.4e-37 159.1 199 48.2
Potri.002G181700 Populus trichocarpa HOM05D006082 ORTHO05D007616 5.8e-37 158.7 223 42.6
Migut.L00585 Erythranthe guttata HOM05D006082 ORTHO05D007616 4.2e-35 152.5 99 73.7
vmacro11192 Vaccinium macrocarpon HOM05D006082 ORTHO05D007616 5.4e-35 152.1 307 36.5
CSS0012451 Camellia sinensis var. sinensis HOM05D006082 ORTHO05D007616 9.3e-35 151.4 195 48.7
Pp3c10_9330 Physcomitrium patens HOM05D006082 ORTHO05D007616 1.6e-34 150.6 202 46.0
EL10Ac9g21719 Beta vulgaris HOM05D006082 ORTHO05D003517 1.3e-33 147.5 163 51.5
Zm00001eb059810 Zea mays HOM05D006082 ORTHO05D007616 1.9e-32 143.7 189 40.7
Mapoly0050s0018 Marchantia polymorpha HOM05D006082 ORTHO05D007616 9.6e-32 141.4 211 40.8
C05p00960 Brassica napus HOM05D006082 ORTHO05D007616 5.3e-30 135.6 284 36.3
AT1G01020 Arabidopsis thaliana HOM05D006082 ORTHO05D007616 1.2e-29 134.4 179 44.1
DCAR_014739 Daucus carota HOM05D006082 ORTHO05D007616 9.9e-29 131.3 227 37.9
BolC5t28880H Brassica oleracea HOM05D006082 ORTHO05D007616 5.5e-27 125.6 277 36.1
arahy.Tifrunner.gnm1.ann1.PGF6M0 Arachis hypogaea HOM05D006082 ORTHO05D007616 2.7e-26 123.2 253 36.8
CBR_g1036 Chara braunii HOM05D006082 ORTHO05D007616 2.7e-26 123.2 234 35.5
Hma1.2p1_0451F.1_g155790 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 1.0e-25 121.3 73 74.0
SEGI_20928 Sequoiadendron giganteum HOM05D006082 ORTHO05D007616 2.3e-25 120.2 152 41.4
Hma1.2p1_0262F.1_g105255 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 6.7e-25 118.6 75 69.3
GSVIVG01003191001 Vitis vinifera HOM05D006082 ORTHO05D007616 6.7e-25 118.6 132 52.3
Hma1.2p1_0451F.1_g155800 Hydrangea macrophylla HOM05D006082 ORTHO05D007616 2.5e-24 116.7 132 53.8
SMO367G0224 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 5.6e-24 115.5 196 36.2
AagrBONN_evm.TU.Sc2ySwM_340.22 Anthoceros agrestis HOM05D006082 ORTHO05D007616 6.9e-22 108.6 203 37.4
MD07G1162500 Malus domestica HOM05D006082 ORTHO05D007616 1.5e-21 107.5 137 45.3
Sed0024729 Sechium edule HOM05D006082 ORTHO05D007616 3.8e-20 102.8 118 48.3
QL03p043604 Quercus lobata HOM05D006082 ORTHO05D007616 2.7e-18 96.7 194 34.0
GSVIVG01003186001 Vitis vinifera HOM05D006082 ORTHO05D007616 3.7e-15 86.3 72 65.3
CAN.G34.12 Capsicum annuum HOM05D006082 ORTHO05D007616 6.3e-15 85.5 72 65.3
BcaC05g24597 Brassica carinata HOM05D006082 ORTHO05D007616 1.1e-14 84.7 194 33.5
C05p00940 Brassica napus HOM05D006082 ORTHO05D007616 7.2e-11 72.0 106 44.3
SMO230G0051 Selaginella moellendorffii HOM05D006082 ORTHO05D007616 1.6e-10 70.9 165 30.9
MD07G1162600 Malus domestica HOM05D006082 ORTHO05D007616 4.8e-07 59.3 58 60.3


User provided reference genes

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