Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 3.5e-71 271.6 139 100.0
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 2.3e-67 258.8 139 97.1
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 5.4e-64 247.7 140 92.1
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.8e-43 179.5 145 65.5
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 8.9e-43 177.2 143 65.7
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 1.0e-38 163.7 139 61.9
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 8.9e-27 124.0 141 48.9
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 2.9e-25 119.0 133 47.4
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 6.4e-25 117.9 130 48.5
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 6.0e-23 111.3 126 46.0
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 7.8e-23 110.9 132 47.0
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 3.0e-22 109.0 126 53.2
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 6.6e-22 107.8 135 48.9
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 6.2e-20 101.3 135 45.2
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 1.1e-19 100.5 141 45.4
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 4.4e-18 95.1 141 43.3
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 4.4e-18 95.1 128 46.1
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 6.4e-17 91.3 153 40.5
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 1.9e-16 89.7 121 46.3
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 2.4e-16 89.4 114 46.5
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 9.3e-16 87.4 125 40.0
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.2e-15 87.0 99 48.5
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 2.1e-15 86.3 142 40.1
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 2.7e-15 85.9 121 43.8
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 6.0e-15 84.7 121 44.6
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 1.3e-14 83.6 129 38.8
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 3.0e-14 82.4 82 46.3
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 6.6e-14 81.3 117 38.5
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.1e-13 80.5 89 50.6
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.1e-13 80.5 137 38.0
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.5e-13 80.1 89 50.6
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 1.9e-13 79.7 74 50.0
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 5.6e-13 78.2 94 47.9
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 7.3e-13 77.8 150 37.3
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 1.3e-12 77.0 117 40.2
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 1.3e-12 77.0 119 42.0
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 1.6e-12 76.6 94 48.9
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 3.6e-12 75.5 89 49.4
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 6.2e-12 74.7 112 37.5
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 8.1e-12 74.3 74 50.0
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 1.4e-11 73.6 76 48.7
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.4e-11 73.6 70 50.0
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 1.4e-11 73.6 144 34.7
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 1.8e-11 73.2 92 41.3
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 3.1e-11 72.4 147 34.0
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 3.1e-11 72.4 117 37.6
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 3.1e-11 72.4 130 37.7
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 4.0e-11 72.0 89 47.2
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 3.4e-10 68.9 87 41.4
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 7.6e-10 67.8 79 44.3
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 9.9e-10 67.4 119 35.3
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 1.3e-09 67.0 122 33.6
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 1.3e-09 67.0 126 35.7
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 1.3e-09 67.0 94 41.5
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 1.3e-09 67.0 113 31.9
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 1.7e-09 66.6 125 39.2
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 2.2e-09 66.2 126 34.9
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 2.2e-09 66.2 89 43.8
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 2.9e-09 65.9 118 34.7
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 3.8e-09 65.5 91 44.0
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 4.9e-09 65.1 104 40.4
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 6.4e-09 64.7 112 35.7
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.4e-09 64.7 125 32.0
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.4e-09 64.7 124 32.3
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 8.4e-09 64.3 103 37.9
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 1.1e-08 63.9 99 37.4
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 1.1e-08 63.9 99 36.4
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.1e-08 63.9 104 39.4
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 1.1e-08 63.9 100 38.0
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 1.4e-08 63.5 141 33.3
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.4e-08 63.5 129 31.8
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 1.4e-08 63.5 71 40.8
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 1.9e-08 63.2 69 44.9
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 2.4e-08 62.8 125 32.0
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 3.2e-08 62.4 66 45.5
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 3.2e-08 62.4 94 38.3
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 4.2e-08 62.0 80 43.8
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 5.4e-08 61.6 83 42.2
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 5.4e-08 61.6 146 34.9
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 7.1e-08 61.2 127 31.5
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 9.3e-08 60.8 53 45.3
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 1.6e-07 60.1 102 37.3
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 2.1e-07 59.7 67 43.3
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 2.1e-07 59.7 111 34.2
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 2.7e-07 59.3 118 33.9
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 4.6e-07 58.5 135 36.3
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 6.0e-07 58.2 79 38.0
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 1.0e-06 57.4 134 32.8
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 1.3e-06 57.0 132 33.3
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 1.3e-06 57.0 131 28.2
MSTRG.8114 Avicennia marina HOM05D007333 ORTHO05D008874 2.3e-06 56.2 94 39.4
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 3.9e-06 55.5 40 60.0
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 3.9e-06 55.5 66 43.9
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 8.7e-06 54.3 151 32.5
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 8.7e-06 54.3 66 39.4


User provided reference genes

Program Settings