Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007590.3 Solanum lycopersicum HOM05D002135 ORTHO05D002134 1.5e-107 392.9 204 100.0
Sopen11g003440 Solanum pennellii HOM05D002135 ORTHO05D002134 3.9e-95 351.7 183 100.0
PGSC0003DMG400027316 Solanum tuberosum HOM05D002135 ORTHO05D002134 5.8e-91 337.8 183 96.7
Nitab4.5_0010486g0010 Nicotiana tabacum HOM05D002135 ORTHO05D002134 9.6e-62 240.7 189 68.8
Nitab4.5_0002259g0080 Nicotiana tabacum HOM05D002135 ORTHO05D002134 2.2e-58 229.6 189 66.7
CAN.G135.66 Capsicum annuum HOM05D002135 ORTHO05D002134 3.8e-50 202.2 188 66.5
Peaxi162Scf00244g00029 Petunia axillaris HOM05D002135 ORTHO05D002134 3.8e-50 202.2 170 65.3
Cc02_g10260 Coffea canephora HOM05D002135 ORTHO05D002134 3.3e-38 162.5 166 52.4
CiPaw.14G028300 Carya illinoinensis HOM05D002135 ORTHO05D002134 1.1e-30 137.5 192 42.7
Oeu015045.1 Olea europaea HOM05D002135 ORTHO05D002134 3.7e-29 132.5 173 43.9
Duzib114G0749 Durio zibethinus HOM05D002135 ORTHO05D002134 4.8e-29 132.1 193 46.6
Prupe.2G089600 Prunus persica HOM05D002135 ORTHO05D002134 3.1e-28 129.4 170 47.1
Eucgr.J01018 Eucalyptus grandis HOM05D002135 ORTHO05D002134 9.1e-28 127.9 195 42.1
Manes.07G091833 Manihot esculenta HOM05D002135 ORTHO05D002134 9.1e-28 127.9 181 44.2
Thecc.10G100700 Theobroma cacao HOM05D002135 ORTHO05D002134 1.2e-27 127.5 173 48.0
MSTRG.410 Avicennia marina HOM05D002135 ORTHO05D002134 1.5e-27 127.1 172 44.2
Actinidia18572 Actinidia chinensis HOM05D002135 ORTHO05D002134 2.0e-27 126.7 171 47.4
COL.COLO4_37855 Corchorus olitorius HOM05D002135 ORTHO05D002134 2.0e-27 126.7 194 42.8
CSS0001130 Camellia sinensis var. sinensis HOM05D002135 ORTHO05D002134 2.6e-27 126.3 190 44.7
Phvul.007G105100 Phaseolus vulgaris HOM05D002135 ORTHO05D002134 2.6e-27 126.3 177 45.8
TWI15G0088 Tripterygium wilfordii HOM05D002135 ORTHO05D002134 3.4e-27 125.9 162 46.9
DCAR_019036 Daucus carota HOM05D002135 ORTHO05D002134 5.9e-27 125.2 166 46.4
Cfa011220 Carpinus fangiana HOM05D002135 ORTHO05D002134 7.7e-27 124.8 176 45.5
Cpa.g.sc720.3 Carica papaya HOM05D002135 ORTHO05D002134 1.7e-26 123.6 189 41.8
Glyma.20G188400 Glycine max HOM05D002135 ORTHO05D002134 5.0e-26 122.1 184 43.5
Glyma.10G202000 Glycine max HOM05D002135 ORTHO05D002134 8.5e-26 121.3 183 42.6
Gohir.A10G198900 Gossypium hirsutum HOM05D002135 ORTHO05D002134 1.1e-25 120.9 171 46.2
Gohir.D10G205600 Gossypium hirsutum HOM05D002135 ORTHO05D002134 1.4e-25 120.6 169 45.6
Haze_02615 Corylus avellana HOM05D002135 ORTHO05D002134 2.5e-25 119.8 175 44.0
Gorai.011G230700 Gossypium raimondii HOM05D002135 ORTHO05D002134 2.5e-25 119.8 169 45.6
TAR636G1009 Trochodendron aralioides HOM05D002135 ORTHO05D002134 7.2e-25 118.2 155 46.5
Atru.chr12.962 Acer truncatum HOM05D002135 ORTHO05D002134 1.6e-24 117.1 187 40.1
Lalb_Chr19g0129291 Lupinus albus HOM05D002135 ORTHO05D002134 1.6e-24 117.1 172 46.5
Ca_10490_v3 Cicer arietinum L. HOM05D002135 ORTHO05D002134 2.1e-24 116.7 183 39.3
Lj5g0024464 Lotus japonicus HOM05D002135 ORTHO05D002134 2.1e-24 116.7 174 40.8
RcHm_v2.0_Chr1g0334131 Rosa chinensis HOM05D002135 ORTHO05D002134 2.1e-24 116.7 188 41.0
Nn6g35053 Nelumbo nucifera HOM05D002135 ORTHO05D002134 2.7e-24 116.3 171 40.9
TWI63G1083 Tripterygium wilfordii HOM05D002135 ORTHO05D002134 2.7e-24 116.3 157 43.3
Medtr1g492730 Medicago truncatula HOM05D002135 ORTHO05D002134 3.6e-24 115.9 184 41.3
Psat0s1649g0040 Pisum sativum HOM05D002135 ORTHO05D002134 4.7e-24 115.5 187 41.2
FAN03G0805 Fragaria x ananassa HOM05D002135 ORTHO05D002134 6.1e-24 115.2 193 38.9
FvH4_7g06300 Fragaria vesca HOM05D002135 ORTHO05D002134 1.0e-23 114.4 183 41.5
FAN06G5107 Fragaria x ananassa HOM05D002135 ORTHO05D002134 1.0e-23 114.4 183 41.5
FAN10G0439 Fragaria x ananassa HOM05D002135 ORTHO05D002134 1.0e-23 114.4 183 41.5
PGR044G0591 Punica granatum HOM05D002135 ORTHO05D002134 1.0e-23 114.4 188 45.2
CANSAT56G3456 Cannabis sativa HOM05D002135 ORTHO05D002134 1.4e-23 114.0 196 38.8
PSO384G3872 Papaver somniferum HOM05D002135 ORTHO05D002134 1.4e-23 114.0 163 45.4
Potri.008G026100 Populus trichocarpa HOM05D002135 ORTHO05D002134 1.8e-23 113.6 196 41.8
vmacro07221 Vaccinium macrocarpon HOM05D002135 ORTHO05D002134 6.7e-23 111.7 166 46.4
Potri.010G234300 Populus trichocarpa HOM05D002135 ORTHO05D002134 1.1e-22 110.9 180 42.8
MELO3C012370.2 Cucumis melo HOM05D002135 ORTHO05D002134 1.5e-22 110.5 183 41.0
Ciclev10032126m.g Citrus clementina HOM05D002135 ORTHO05D002134 2.6e-22 109.8 158 43.0
CsaV3_5G035670 Cucumis sativus L. HOM05D002135 ORTHO05D002134 2.6e-22 109.8 183 40.4
PSO339G5382 Papaver somniferum HOM05D002135 ORTHO05D002134 2.6e-22 109.8 163 45.4
Rhsim03G0109200 Rhododendron simsii HOM05D002135 ORTHO05D002134 5.7e-22 108.6 153 45.8
QL04p041010 Quercus lobata HOM05D002135 ORTHO05D002134 7.4e-22 108.2 163 49.7
QL06p020371 Quercus lobata HOM05D002135 ORTHO05D002134 7.4e-22 108.2 163 49.7
VMungo0720G1897 Vigna mungo HOM05D002135 ORTHO05D002134 1.7e-21 107.1 168 43.5
Sed0019679 Sechium edule HOM05D002135 ORTHO05D002134 3.7e-21 105.9 183 37.2
Sed0027309 Sechium edule HOM05D002135 ORTHO05D002134 1.4e-20 104.0 182 44.5
arahy.Tifrunner.gnm1.ann1.6GZ8LR Arachis hypogaea HOM05D002135 ORTHO05D002134 2.4e-20 103.2 172 39.5
arahy.Tifrunner.gnm1.ann1.GZ0G6J Arachis hypogaea HOM05D002135 ORTHO05D002134 2.4e-20 103.2 172 39.5
MD02G1245100 Malus domestica HOM05D002135 ORTHO05D002134 3.1e-20 102.8 167 41.3
GSVIVG01034716001 Vitis vinifera HOM05D002135 ORTHO05D002134 3.1e-20 102.8 180 39.4
Dinv20844 Davidia involucrata HOM05D002135 ORTHO05D002134 1.2e-19 100.9 188 39.4
Sabra08G0017700 Salix brachista HOM05D002135 ORTHO05D002134 1.6e-19 100.5 179 40.2
Aqoxy1G00945 Aquilegia oxysepala HOM05D002135 ORTHO05D002134 2.0e-19 100.1 151 41.7
Migut.F01659 Erythranthe guttata HOM05D002135 ORTHO05D002134 1.7e-18 97.1 98 51.0
Lsat_1_v5_gn_2_102720 Lactuca sativa HOM05D002135 ORTHO05D002134 2.2e-18 96.7 156 37.2
SGA_v2.0_scaffold62G21513 Striga asiatica HOM05D002135 ORTHO05D002134 1.1e-17 94.4 87 58.6
HanXRQChr16g0513251 Helianthus annuus HOM05D002135 ORTHO05D002134 1.5e-17 94.0 76 56.6
Lj3A932T62 Lonicera japonica HOM05D002135 ORTHO05D002134 5.5e-17 92.0 117 43.6
Lsat_1_v5_gn_0_25680 Lactuca sativa HOM05D002135 ORTHO05D002134 1.0e-15 87.8 91 49.5
Sabra10G0181600 Salix brachista HOM05D002135 ORTHO05D002134 1.0e-15 87.8 80 53.8
Dinv31293 Davidia involucrata HOM05D002135 ORTHO05D002134 1.4e-15 87.4 69 65.2
ECA238G0447 Erigeron canadensis HOM05D002135 ORTHO05D002134 5.2e-15 85.5 119 40.3
CiPaw.13G036000 Carya illinoinensis HOM05D002135 ORTHO05D002134 6.7e-15 85.1 64 64.1
TPR.G2548 Trifolium pratense HOM05D002135 ORTHO05D002134 8.8e-15 84.7 144 41.0
ECA232G4985 Erigeron canadensis HOM05D002135 ORTHO05D002134 2.6e-14 83.2 86 46.5
unitig_736.g22319 Utricularia gibba HOM05D002135 ORTHO05D002134 2.6e-14 83.2 168 36.3
EL10Ac4g08639 Beta vulgaris HOM05D002135 ORTHO05D002134 1.7e-13 80.5 197 35.0
MBI17_g11103_MAGBIO Magnolia biondii HOM05D002135 ORTHO05D002134 2.4e-12 76.6 187 30.5
SMO348G0097 Selaginella moellendorffii HOM05D002135 ORTHO05D002134 1.2e-11 74.3 92 46.7
HanXRQChr04g0106651 Helianthus annuus HOM05D002135 ORTHO05D002134 1.6e-11 73.9 47 63.8
Ah.04g163660 Amaranthus hybridus HOM05D002135 ORTHO05D002134 7.7e-11 71.6 182 35.7
CDE02G4718 Ceratophyllum demersum HOM05D002135 ORTHO05D002134 1.3e-10 70.9 150 32.0
Sc06g0002200 Simmondsia chinensis HOM05D002135 ORTHO05D002134 1.7e-10 70.5 41 73.2
Pp3c3_11300 Physcomitrium patens HOM05D002135 ORTHO05D002134 2.2e-10 70.1 47 61.7
Pp3c13_8540 Physcomitrium patens HOM05D002135 ORTHO05D002134 6.5e-10 68.6 47 59.6
ATR0820G115 Amborella trichopoda HOM05D002135 ORTHO05D002134 2.5e-09 66.6 154 31.8
Mapoly0010s0017 Marchantia polymorpha HOM05D002135 ORTHO05D002134 3.2e-09 66.2 70 44.3
vmacro01048 Vaccinium macrocarpon HOM05D001299 ORTHO05D004242 3.2e-09 66.2 37 70.3
Pp3c12_7280 Physcomitrium patens HOM05D002135 ORTHO05D002134 7.2e-09 65.1 49 55.1
Hund06747 Selenicereus undatus HOM05D002135 ORTHO05D002134 1.2e-08 64.3 170 32.4
AUR62041542 Chenopodium quinoa HOM05D002135 ORTHO05D002134 3.0e-07 59.7 183 27.9
CBR_g16890 Chara braunii HOM05D002135 ORTHO05D002134 5.2e-07 58.9 75 41.3


User provided reference genes

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