Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 6.8e-136 487.3 234 100.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 4.4e-103 378.3 238 76.9
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 2.1e-92 342.8 239 68.2
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 7.1e-77 291.2 166 84.3
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 1.3e-73 280.4 210 65.2
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 3.1e-64 249.2 212 56.6
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 6.9e-64 248.1 223 52.5
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.2e-62 243.0 223 50.7
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 3.8e-62 242.3 221 51.1
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 4.9e-62 241.9 234 49.6
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 6.5e-62 241.5 234 49.6
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 6.5e-62 241.5 212 53.3
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.1e-61 240.7 212 52.8
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.5e-61 238.4 220 49.5
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.6e-60 236.9 218 51.8
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.6e-60 236.9 231 49.8
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 3.5e-60 235.7 231 50.2
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 3.5e-60 235.7 216 52.3
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.6e-60 235.3 218 52.8
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 4.6e-60 235.3 231 50.2
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 6.0e-60 235.0 212 52.8
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 7.9e-60 234.6 223 52.5
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.8e-59 233.4 218 50.9
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 3.0e-59 232.6 223 51.1
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 3.9e-59 232.3 213 54.5
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 6.7e-59 231.5 234 50.0
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 8.7e-59 231.1 228 48.2
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.5e-58 230.3 214 52.8
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.5e-58 230.3 234 49.1
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 2.5e-58 229.6 224 49.6
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 2.5e-58 229.6 235 50.6
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 2.5e-58 229.6 215 51.2
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.3e-58 229.2 220 47.7
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 3.3e-58 229.2 234 50.0
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 4.3e-58 228.8 214 51.4
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 5.7e-58 228.4 223 49.8
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 5.7e-58 228.4 214 49.1
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 9.6e-58 227.6 218 49.5
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 9.6e-58 227.6 213 52.1
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 4.8e-57 225.3 216 50.0
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 8.2e-57 224.6 223 48.9
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 1.4e-56 223.8 224 49.6
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 1.4e-56 223.8 218 48.2
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 1.8e-56 223.4 214 50.0
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 3.1e-56 222.6 218 49.1
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 4.1e-56 222.2 225 49.8
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 9.0e-56 221.1 221 47.5
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 9.0e-56 221.1 235 50.2
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.2e-55 220.7 197 53.3
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.2e-55 220.7 213 51.6
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 1.5e-55 220.3 221 49.3
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 1.5e-55 220.3 204 52.9
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 2.0e-55 219.9 223 49.8
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 2.6e-55 219.5 223 48.0
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 3.4e-55 219.2 212 50.0
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 3.4e-55 219.2 215 47.9
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 4.5e-55 218.8 215 50.2
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.9e-55 218.4 223 48.4
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.9e-55 218.4 218 49.1
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 5.9e-55 218.4 218 49.1
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 1.3e-54 217.2 216 48.6
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.9e-54 216.1 224 49.1
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 2.9e-54 216.1 231 48.1
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 3.8e-54 215.7 221 47.1
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 5.0e-54 215.3 218 48.2
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 5.0e-54 215.3 213 48.4
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 8.5e-54 214.5 229 48.0
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.1e-53 214.2 225 48.4
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.9e-53 213.4 218 47.2
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 2.5e-53 213.0 213 49.3
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 2.5e-53 213.0 216 47.7
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 4.2e-53 212.2 216 46.8
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 9.3e-53 211.1 216 48.6
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.6e-52 210.3 215 49.3
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 2.7e-52 209.5 216 47.7
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 3.6e-52 209.1 205 50.7
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 3.6e-52 209.1 220 47.3
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 4.6e-52 208.8 221 48.0
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 6.1e-52 208.4 234 47.0
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 7.9e-52 208.0 228 46.9
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 1.8e-51 206.8 223 46.2
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 1.8e-51 206.8 223 46.2
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 1.8e-51 206.8 223 46.2
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 3.0e-51 206.1 215 48.4
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 3.9e-51 205.7 214 48.6
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 5.1e-51 205.3 228 45.6
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 6.7e-51 204.9 223 45.7
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 8.7e-51 204.5 228 45.2
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.9e-50 203.4 222 45.0
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 9.7e-50 201.1 222 44.6
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 2.4e-48 196.4 211 44.5
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 4.1e-48 195.7 235 43.0
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.5e-47 193.7 278 37.1
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 4.5e-47 192.2 214 44.9
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.7e-46 190.3 179 50.8
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 4.2e-45 185.7 215 42.8
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 1.2e-44 184.1 223 43.0
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 1.0e-43 181.0 210 41.9
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 1.8e-43 180.3 177 52.0
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 1.8e-43 180.3 210 41.4
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 3.9e-43 179.1 245 38.4
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 3.7e-41 172.6 222 41.4
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 4.5e-39 165.6 176 47.2
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 6.5e-38 161.8 176 46.0
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 8.5e-38 161.4 158 51.3
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 3.2e-37 159.5 213 39.9
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 4.2e-37 159.1 176 42.6
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.0e-34 150.2 215 37.2
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.4e-32 144.1 209 37.3
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 2.0e-31 140.2 158 44.9
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 2.6e-31 139.8 215 34.4
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 3.5e-31 139.4 210 34.3
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 8.5e-30 134.8 188 39.4
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 1.1e-29 134.4 160 42.5
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.6e-28 130.6 137 42.3
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 6.1e-28 128.6 201 35.8
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.1e-24 117.9 109 54.1
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 3.7e-17 92.8 90 57.8
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 2.0e-15 87.0 88 48.9
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 2.9e-14 83.2 97 41.2
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 2.0e-07 60.5 57 50.9
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 2.7e-07 60.1 50 60.0
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 8.6e-06 55.1 54 44.4


User provided reference genes

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