Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 0.0e+00 1642.5 847 100.0
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 0.0e+00 1573.1 847 96.0
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 0.0e+00 1530.0 864 92.4
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 0.0e+00 1224.5 878 76.7
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1121.7 797 76.4
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1094.3 822 73.4
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 5.6e-289 997.7 947 61.7
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 5.7e-124 449.5 843 39.1
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.1e-118 431.0 923 36.6
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 6.7e-117 426.0 874 38.1
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 2.2e-112 411.0 810 37.2
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 2.9e-112 410.6 679 41.1
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 3.2e-111 407.1 861 37.2
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 4.6e-110 403.3 816 37.1
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 6.1e-110 402.9 791 37.8
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 1.4e-106 391.7 865 36.2
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 1.3e-104 385.2 838 36.0
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 3.8e-104 383.6 857 35.8
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 6.5e-104 382.9 835 36.9
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.9e-103 381.3 858 36.4
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 7.9e-102 375.9 830 35.5
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 3.9e-101 373.6 887 34.9
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 4.4e-100 370.2 859 35.7
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 9.7e-100 369.0 504 45.6
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 2.8e-99 367.5 869 34.3
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.4e-98 364.4 789 35.2
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 5.3e-98 363.2 849 35.2
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.3e-98 363.2 852 34.6
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 6.5e-96 356.3 870 32.2
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.9e-95 354.8 693 36.9
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 1.9e-95 354.8 869 35.1
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.4e-95 352.4 840 33.7
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 4.7e-94 350.1 600 38.5
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.8e-93 348.2 861 34.8
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 3.0e-93 347.4 545 43.3
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.7e-92 343.2 863 32.9
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.7e-91 341.7 750 36.5
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 3.7e-91 340.5 629 39.3
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.8e-91 340.1 847 33.6
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 6.3e-91 339.7 863 33.8
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 8.2e-91 339.3 865 33.5
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 3.1e-90 337.4 864 34.1
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 1.2e-89 335.5 852 33.6
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 1.6e-89 335.1 804 33.7
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 7.7e-89 332.8 857 33.0
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 2.2e-88 331.3 840 33.6
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 2.9e-88 330.9 808 34.0
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 6.5e-88 329.7 789 34.6
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 6.5e-88 329.7 518 42.1
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 2.5e-87 327.8 887 34.4
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 5.5e-87 326.6 805 34.2
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 9.4e-87 325.9 903 32.9
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 1.6e-86 325.1 917 33.3
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.8e-85 321.6 909 31.5
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 4.0e-85 320.5 563 41.4
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 8.8e-85 319.3 778 34.3
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 2.0e-84 318.2 842 32.4
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 2.0e-84 318.2 870 32.6
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 3.7e-83 313.9 774 33.5
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 5.4e-82 310.1 826 33.8
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 2.0e-81 308.1 808 32.8
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 2.7e-81 307.8 883 31.5
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 3.5e-81 307.4 812 32.5
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 4.5e-81 307.0 783 35.2
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 5.9e-81 306.6 807 33.2
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 5.9e-81 306.6 851 31.8
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 5.0e-80 303.5 838 32.2
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 6.5e-80 303.1 791 33.1
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.1e-78 298.1 794 33.2
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.8e-77 295.0 860 31.4
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 2.3e-77 294.7 915 30.2
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 4.0e-77 293.9 800 32.9
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 2.0e-76 291.6 570 37.4
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 3.4e-76 290.8 567 37.9
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 2.8e-75 287.7 851 30.9
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 7.2e-71 273.1 581 37.9
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 3.0e-69 267.7 958 30.4
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 6.8e-69 266.5 958 30.2
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 4.9e-67 260.4 759 31.6
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 8.3e-67 259.6 293 51.5
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.9e-63 248.4 845 30.1
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 5.6e-63 246.9 876 30.7
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 1.2e-62 245.7 820 30.6
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 1.2e-62 245.7 850 30.2
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 2.8e-62 244.6 835 29.8
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.4e-61 242.3 558 35.1
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 1.8e-61 241.9 672 34.2
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 9.8e-60 236.1 803 28.4
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.7e-59 235.3 828 30.0
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 2.9e-59 234.6 777 30.6
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 5.0e-56 223.8 812 29.3
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 5.0e-56 223.8 812 29.3
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 3.3e-55 221.1 795 29.7
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 8.1e-54 216.5 818 27.8
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 4.0e-53 214.2 818 27.8
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 6.0e-49 200.3 571 31.0
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.7e-48 198.7 574 31.2
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 7.3e-47 193.4 518 31.3
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 1.2e-46 192.6 575 32.0
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 2.1e-46 191.8 885 27.6
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 8.1e-46 189.9 528 31.8
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 4.0e-45 187.6 522 30.5
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 1.2e-44 186.0 553 29.3
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 4.9e-43 180.6 671 31.0
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 2.1e-41 175.3 664 28.3
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.7e-40 172.2 614 28.8
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-34 152.9 159 52.8
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 1.6e-25 122.5 194 41.8
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.9e-16 91.3 146 37.0
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.1e-09 68.9 432 24.8
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 2.1e-09 68.9 432 24.8
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 6.0e-09 67.4 115 34.8
FvH4_5g06191 Fragaria vesca HOM05D001393 ORTHO05D007477 1.3e-06 59.7 73 47.9


User provided reference genes

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