Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g007000.2 Solanum lycopersicum HOM05D004538 ORTHO05D006068 6.6e-271 936.8 476 100.0
PGSC0003DMG400023975 Solanum tuberosum HOM05D004538 ORTHO05D006068 4.1e-265 917.5 476 98.1
Sopen11g002920 Solanum pennellii HOM05D004538 ORTHO05D006068 2.8e-261 904.8 476 96.8
Nitab4.5_0005622g0040 Nicotiana tabacum HOM05D004538 ORTHO05D006068 4.4e-251 870.9 474 92.4
CAN.G645.5 Capsicum annuum HOM05D004538 ORTHO05D006068 3.7e-250 867.8 477 92.2
Peaxi162Scf00173g00324 Petunia axillaris HOM05D004538 ORTHO05D006068 6.0e-240 833.9 477 89.9
Cc02_g09720 Coffea canephora HOM05D004538 ORTHO05D006068 2.4e-204 715.7 477 77.1
Cc02_g29800 Coffea canephora HOM05D004538 ORTHO05D006068 1.5e-203 713.0 477 77.1
SGA_v2.0_scaffold62G21339 Striga asiatica HOM05D004538 ORTHO05D006068 1.5e-203 713.0 474 76.2
CSS0012792 Camellia sinensis var. sinensis HOM05D004538 ORTHO05D006068 1.0e-202 710.3 476 77.1
Lsat_1_v5_gn_7_116401 Lactuca sativa HOM05D004538 ORTHO05D006068 3.2e-201 705.3 474 75.7
Migut.F00884 Erythranthe guttata HOM05D004538 ORTHO05D006068 5.5e-201 704.5 474 75.3
Nitab4.5_0001437g0060 Nicotiana tabacum HOM05D004538 ORTHO05D006068 5.1e-199 698.0 375 91.5
Hma1.2p1_0321F.1_g124200 Hydrangea macrophylla HOM05D004538 ORTHO05D006068 3.3e-198 695.3 482 75.7
DCAR_013768 Daucus carota HOM05D004538 ORTHO05D006068 1.1e-196 690.3 482 74.9
HanXRQChr11g0334561 Helianthus annuus HOM05D004538 ORTHO05D006068 1.1e-196 690.3 477 73.6
Actinidia00835 Actinidia chinensis HOM05D004538 ORTHO05D006068 5.3e-196 688.0 476 74.6
SalBow6G4226 Salvia bowleyana HOM05D004538 ORTHO05D006068 4.5e-195 684.9 474 74.7
HanXRQChr04g0114571 Helianthus annuus HOM05D004538 ORTHO05D006068 4.2e-193 678.3 477 73.8
CsaV3_4G008160 Cucumis sativus L. HOM05D004538 ORTHO05D006068 5.5e-193 677.9 425 81.4
Sp6g17940 Schrenkiella parvula HOM05D004538 ORTHO05D006068 1.6e-192 676.4 404 83.7
Eucgr.F02006 Eucalyptus grandis HOM05D004538 ORTHO05D006068 3.6e-192 675.2 402 83.6
Aa31LG3G12000 Aethionema arabicum HOM05D004538 ORTHO05D006068 6.1e-192 674.5 404 82.9
Lj8A182T63 Lonicera japonica HOM05D004538 ORTHO05D006068 7.9e-192 674.1 394 85.3
Prupe.4G230100 Prunus persica HOM05D004538 ORTHO05D006068 1.8e-191 672.9 476 74.4
Duzib268G1486 Durio zibethinus HOM05D004538 ORTHO05D006068 2.3e-191 672.5 474 74.1
GSVIVG01014777001 Vitis vinifera HOM05D004538 ORTHO05D006068 3.0e-191 672.2 475 74.5
Prupe.8G086500 Prunus persica HOM05D004538 ORTHO05D006068 3.9e-191 671.8 476 74.6
AT5G56090 Arabidopsis thaliana HOM05D004538 ORTHO05D006068 6.7e-191 671.0 404 82.4
TAR626G1654 Trochodendron aralioides HOM05D004538 ORTHO05D006068 6.7e-191 671.0 473 73.6
ECA236G0032 Erigeron canadensis HOM05D004538 ORTHO05D006068 8.8e-191 670.6 387 84.2
AL8G31670 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 1.1e-190 670.2 404 82.4
Dinv31347 Davidia involucrata HOM05D004538 ORTHO05D006068 1.1e-190 670.2 389 85.9
PSO541G6331 Papaver somniferum HOM05D004538 ORTHO05D006068 1.5e-190 669.8 470 73.4
unitig_899.g14715 Utricularia gibba HOM05D004538 ORTHO05D006068 1.5e-190 669.8 473 73.6
AL2G22990 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 2.0e-190 669.5 404 82.4
BcaB08g35975 Brassica carinata HOM05D004538 ORTHO05D006068 2.0e-190 669.5 403 83.1
BraA10t43427Z Brassica rapa HOM05D004538 ORTHO05D006068 2.0e-190 669.5 424 80.2
Sed0002758 Sechium edule HOM05D004538 ORTHO05D006068 2.5e-190 669.1 419 81.6
TWI39G0910 Tripterygium wilfordii HOM05D004538 ORTHO05D006068 3.3e-190 668.7 404 83.7
Thecc.07G004000 Theobroma cacao HOM05D004538 ORTHO05D006068 7.4e-190 667.5 474 73.6
Lj1C898T12 Lonicera japonica HOM05D004538 ORTHO05D006068 9.7e-190 667.2 384 86.7
PSO675G3744 Papaver somniferum HOM05D004538 ORTHO05D006068 9.7e-190 667.2 474 72.6
C09p47190 Brassica napus HOM05D002718 ORTHO05D003269 1.3e-189 666.8 403 82.9
Carub.0008s1641 Capsella rubella HOM05D004538 ORTHO05D006068 1.3e-189 666.8 404 81.9
LjContig00081g0007081 Lotus japonicus HOM05D004538 ORTHO05D006068 2.2e-189 666.0 448 74.6
A10p13290 Brassica napus HOM05D002718 ORTHO05D003269 2.8e-189 665.6 424 79.7
BolC9t57574H Brassica oleracea HOM05D004538 ORTHO05D006068 2.8e-189 665.6 403 82.6
AL2G24490 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 3.7e-189 665.2 404 81.9
QL09p046970 Quercus lobata HOM05D004538 ORTHO05D006068 4.8e-189 664.8 395 84.8
BcaC04g20158 Brassica carinata HOM05D004538 ORTHO05D006068 8.2e-189 664.1 387 84.5
Aqoxy7G01640 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 1.1e-188 663.7 476 71.6
CiPaw.15G107100 Carya illinoinensis HOM05D004538 ORTHO05D006068 1.1e-188 663.7 393 84.0
Haze_03267 Corylus avellana HOM05D004538 ORTHO05D006068 1.1e-188 663.7 393 84.0
Hund25422 Selenicereus undatus HOM05D004538 ORTHO05D006068 1.1e-188 663.7 468 74.6
Gohir.D13G132900 Gossypium hirsutum HOM05D004538 ORTHO05D006068 1.4e-188 663.3 474 73.2
AUR62001067 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.8e-188 662.9 465 74.2
Thhalv10013497m.g Eutrema salsugineum HOM05D004538 ORTHO05D006068 1.8e-188 662.9 404 82.2
THA.LOC104811692 Tarenaya hassleriana HOM05D004538 ORTHO05D006068 1.8e-188 662.9 393 83.2
Gorai.013G149100 Gossypium raimondii HOM05D004538 ORTHO05D006068 3.1e-188 662.1 474 73.0
Oeu036424.1 Olea europaea HOM05D004538 ORTHO05D006068 4.1e-188 661.8 387 85.5
PGR083G1782 Punica granatum HOM05D004538 ORTHO05D006068 4.1e-188 661.8 395 83.0
RcHm_v2.0_Chr6g0267391 Rosa chinensis HOM05D004538 ORTHO05D006068 4.1e-188 661.8 396 82.6
Ciclev10008262m.g Citrus clementina HOM05D004538 ORTHO05D006068 5.3e-188 661.4 474 73.6
Lj5g0024294 Lotus japonicus HOM05D004538 ORTHO05D006068 5.3e-188 661.4 448 74.6
Gohir.A13G129700 Gossypium hirsutum HOM05D004538 ORTHO05D006068 6.9e-188 661.0 474 73.2
Potri.011G166800 Populus trichocarpa HOM05D004538 ORTHO05D006068 1.2e-187 660.2 475 72.8
ClCG07G010160 Citrullus lanatus HOM05D004538 ORTHO05D006068 2.0e-187 659.4 451 77.2
BcaC04g20151 Brassica carinata HOM05D004538 ORTHO05D006068 2.6e-187 659.1 385 84.2
CARHR269470 Cardamine hirsuta HOM05D004538 ORTHO05D006068 2.6e-187 659.1 434 76.7
BcaC04g20148 Brassica carinata HOM05D004538 ORTHO05D006068 5.9e-187 657.9 384 84.6
Hund19415 Selenicereus undatus HOM05D004538 ORTHO05D006068 7.7e-187 657.5 465 73.8
EL10Ac2g02751 Beta vulgaris HOM05D004538 ORTHO05D006068 1.3e-186 656.8 466 73.2
VMungo0647G1241 Vigna mungo HOM05D004538 ORTHO05D006068 1.3e-186 656.8 407 80.8
C09p47240 Brassica napus HOM05D004538 ORTHO05D006068 1.7e-186 656.4 385 83.9
Sabra11G0139500 Salix brachista HOM05D004538 ORTHO05D006068 2.2e-186 656.0 416 79.1
vmacro09607 Vaccinium macrocarpon HOM05D004538 ORTHO05D006068 2.2e-186 656.0 536 65.3
CANSAT11G1513 Cannabis sativa HOM05D004538 ORTHO05D006068 6.5e-186 654.4 438 75.6
MELO3C016120.2 Cucumis melo HOM05D004538 ORTHO05D006068 6.5e-186 654.4 447 76.1
Ah.12g065010 Amaranthus hybridus HOM05D004538 ORTHO05D006068 1.1e-185 653.7 445 75.5
COL.COLO4_07768 Corchorus olitorius HOM05D004538 ORTHO05D006068 1.1e-185 653.7 383 84.6
RcHm_v2.0_Chr5g0075121 Rosa chinensis HOM05D004538 ORTHO05D006068 1.4e-185 653.3 396 81.3
arahy.Tifrunner.gnm1.ann1.01YFCZ Arachis hypogaea HOM05D004538 ORTHO05D006068 4.2e-185 651.7 406 80.3
arahy.Tifrunner.gnm1.ann1.0Z7D2W Arachis hypogaea HOM05D004538 ORTHO05D006068 5.5e-185 651.4 406 79.8
Lalb_Chr04g0247681 Lupinus albus HOM05D004538 ORTHO05D006068 1.6e-184 649.8 455 74.3
Phvul.008G282700 Phaseolus vulgaris HOM05D004538 ORTHO05D006068 2.1e-184 649.4 390 82.1
PSO063G5767 Papaver somniferum HOM05D004538 ORTHO05D006068 4.7e-184 648.3 470 71.5
FvH4_3g41910 Fragaria vesca HOM05D004538 ORTHO05D006068 6.1e-184 647.9 438 75.3
FAN21G0976 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.4e-183 646.7 396 79.8
Ca_06424_v3 Cicer arietinum L. HOM05D000527 ORTHO05D000559 3.0e-183 645.6 385 82.1
FAN25G0511 Fragaria x ananassa HOM05D004538 ORTHO05D006068 3.0e-183 645.6 396 79.5
Nn1g08442 Nelumbo nucifera HOM05D004538 ORTHO05D006068 3.9e-183 645.2 477 71.1
Sc07g0002240 Simmondsia chinensis HOM05D004538 ORTHO05D006068 5.1e-183 644.8 394 81.2
FAN11G3993 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.1e-182 643.7 438 74.9
TPR.G1264 Trifolium pratense HOM05D004538 ORTHO05D006068 1.1e-182 643.7 394 80.5
Glyma.14G010400 Glycine max HOM05D004538 ORTHO05D006068 4.4e-182 641.7 399 80.7
Psat2g005560 Pisum sativum HOM05D004538 ORTHO05D006068 4.8e-181 638.3 470 71.1
Cpa.g.sc97.88 Carica papaya HOM05D004538 ORTHO05D006068 6.3e-181 637.9 382 82.2
Glyma.02G303400 Glycine max HOM05D004538 ORTHO05D006068 6.3e-181 637.9 377 83.0
Medtr5g096830 Medicago truncatula HOM05D004538 ORTHO05D006068 5.3e-180 634.8 393 80.9
Medtr3g095790 Medicago truncatula HOM05D004538 ORTHO05D006068 2.6e-179 632.5 412 76.7
MBI14_g30901_MAGBIO Magnolia biondii HOM05D004538 ORTHO05D006068 5.2e-175 618.2 480 68.3
Os08g0496000 Oryza sativa ssp. japonica HOM05D004538 ORTHO05D006068 8.2e-173 610.9 406 72.9
ATR0751G112 Amborella trichopoda HOM05D004538 ORTHO05D006068 5.3e-172 608.2 480 65.6
MD02G1271400 Malus domestica HOM05D004538 ORTHO05D006068 4.2e-169 598.6 426 73.7
HPP92_015457 Vanilla planifolia HOM05D004538 ORTHO05D006068 9.1e-164 580.9 390 71.8
AUR62032611 Chenopodium quinoa HOM05D004538 ORTHO05D006068 1.3e-162 577.0 467 67.5
CDE06G0653 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 7.7e-155 551.2 357 73.9
Zm00001eb033900 Zea mays HOM05D004538 ORTHO05D006068 2.3e-151 539.7 428 64.5
AUR62031724 Chenopodium quinoa HOM05D004538 ORTHO05D006068 8.9e-151 537.7 472 63.6
BolC9t57580H Brassica oleracea HOM05D004538 ORTHO05D006068 4.9e-149 531.9 404 70.0
Mapoly0020s0071 Marchantia polymorpha HOM05D004538 ORTHO05D006068 4.1e-148 528.9 407 64.4
Cc02_g29840 Coffea canephora HOM05D004538 ORTHO05D006068 1.7e-146 523.5 345 78.6
Nitab4.5_0004391g0070 Nicotiana tabacum HOM05D004538 ORTHO05D006068 1.5e-145 520.4 342 80.1
Pp3c7_5710 Physcomitrium patens HOM05D004538 ORTHO05D006068 8.9e-143 511.1 376 68.1
Manes.01G005033 Manihot esculenta HOM05D004538 ORTHO05D006068 1.3e-138 497.3 395 66.6
CDE02G3208 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 2.1e-136 490.0 372 64.5
AagrBONN_evm.TU.Sc2ySwM_368.2501 Anthoceros agrestis HOM05D004538 ORTHO05D006068 3.4e-134 482.6 350 66.3
AL8G31690 Arabidopsis lyrata HOM05D004538 ORTHO05D006068 7.1e-132 474.9 316 77.2
SMO353G0004 Selaginella moellendorffii HOM05D004538 ORTHO05D006068 3.5e-131 472.6 366 64.5
CBR_g24146 Chara braunii HOM05D004538 ORTHO05D006068 4.6e-131 472.2 361 64.8
SalBow6G3380 Salvia bowleyana HOM05D004538 ORTHO05D006068 3.1e-127 459.5 477 55.6
Atru.chr2.2684 Acer truncatum HOM05D004538 ORTHO05D006068 2.4e-124 449.9 276 79.7
CDE03G0061 Ceratophyllum demersum HOM05D004538 ORTHO05D006068 3.3e-121 439.5 289 73.0
FvH4_2g10180 Fragaria vesca HOM05D004538 ORTHO05D006068 4.0e-119 432.6 258 82.6
Aa31LG3G11950 Aethionema arabicum HOM05D004538 ORTHO05D006068 1.0e-114 417.9 258 81.4
Potri.001G469701 Populus trichocarpa HOM05D004538 ORTHO05D006068 3.6e-112 409.5 288 73.3
FAN24G0261 Fragaria x ananassa HOM05D004538 ORTHO05D006068 1.4e-111 407.5 309 68.6
MD07G1040600 Malus domestica HOM05D004538 ORTHO05D006068 4.8e-104 382.5 348 62.4
Atru.chr2.2623 Acer truncatum HOM05D004538 ORTHO05D006068 2.1e-96 357.1 212 84.4
Duzib213G1090 Durio zibethinus HOM05D004538 ORTHO05D006068 4.8e-96 355.9 250 73.2
Cre02.g082700 Chlamydomonas reinhardtii HOM05D004538 ORTHO05D006068 6.2e-96 355.5 356 51.7
PRCOL_00000259 Prasinoderma coloniale HOM05D004538 ORTHO05D006068 3.4e-94 349.7 329 53.2
A10p13310 Brassica napus HOM05D004538 ORTHO05D006068 1.6e-91 340.9 234 76.1
Cc02_g29790 Coffea canephora HOM05D004538 ORTHO05D006068 1.8e-87 327.4 228 75.4
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 5.3e-87 325.9 213 74.6
Aqoxy289s001 Aquilegia oxysepala HOM05D004538 ORTHO05D008153 6.5e-77 292.4 211 71.1
Aqoxy2G00269 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 1.2e-75 288.1 178 82.0
SHI46402 Sapria himalayana HOM05D004538 ORTHO05D006068 1.8e-66 257.7 228 60.5
SHI05855 Sapria himalayana HOM05D004538 ORTHO05D006068 4.1e-63 246.5 228 59.2
MSTRG.9067 Avicennia marina HOM05D004538 ORTHO05D006068 1.3e-61 241.5 124 88.7
Haze_27104 Corylus avellana HOM05D004538 ORTHO05D163757 3.8e-61 240.0 357 40.3
Atru.chr2.2696 Acer truncatum HOM05D004538 ORTHO05D006068 1.2e-59 235.0 137 84.7
Haze_26959 Corylus avellana HOM05D004538 ORTHO05D165751 8.8e-58 228.8 291 44.7
SHI05856 Sapria himalayana HOM05D004538 ORTHO05D006068 7.0e-47 192.6 159 64.8
MSTRG.9065 Avicennia marina HOM05D004538 ORTHO05D006068 2.1e-43 181.0 171 57.3
Aqoxy2G00270 Aquilegia oxysepala HOM05D004538 ORTHO05D006068 1.1e-36 158.7 85 88.2
Duzib268G1762 Durio zibethinus HOM05D004538 ORTHO05D006068 1.1e-36 158.7 112 75.0
Atru.chr2.2627 Acer truncatum HOM05D000397 ORTHO05D002023 3.6e-35 153.7 113 71.7
QL03p014007 Quercus lobata HOM05D001565 ORTHO05D005515 5.2e-34 149.8 124 67.7
MSTRG.9077 Avicennia marina HOM05D004538 ORTHO05D006068 1.1e-26 125.6 77 84.4
QL10p039376 Quercus lobata HOM05D004538 ORTHO05D006068 1.4e-23 115.2 84 69.0
ATR0499G006 Amborella trichopoda HOM05D004538 ORTHO05D066479 2.3e-21 107.8 117 55.6
Atru.chr2.2679 Acer truncatum HOM05D004538 ORTHO05D052265 8.1e-19 99.4 90 56.7
MD02G1271500 Malus domestica HOM05D004538 ORTHO05D006068 5.2e-18 96.7 62 83.9
RcHm_v2.0_Chr6g0267421 Rosa chinensis HOM05D004538 ORTHO05D006068 8.9e-18 95.9 62 82.3
Cc02_g29820 Coffea canephora HOM05D004538 ORTHO05D006068 4.9e-16 90.1 68 66.2
ATR0499G019 Amborella trichopoda HOM05D004538 ORTHO05D006068 1.2e-14 85.5 58 62.1
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 1.6e-14 85.1 50 76.0
Oeu026585.1 Olea europaea HOM05D004538 ORTHO05D289065 2.2e-08 64.7 220 26.4
Atru.chr2.2641 Acer truncatum HOM05D004538 ORTHO05D052874 4.9e-08 63.5 44 70.5


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