Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 4.2e-66 254.6 133 100.0
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 4.2e-66 254.6 133 100.0
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 5.1e-64 247.7 133 97.0
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 2.6e-60 235.3 133 90.2
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.5e-60 234.6 132 89.4
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.1e-58 229.9 133 87.2
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 1.2e-57 226.5 134 85.8
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 1.8e-53 212.6 133 78.9
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 1.9e-50 202.6 113 86.7
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 4.7e-49 198.0 135 77.8
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 4.4e-47 191.4 133 73.7
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 9.7e-47 190.3 127 79.5
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 2.2e-46 189.1 134 74.6
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.1e-45 186.8 137 70.1
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.4e-45 185.7 133 69.9
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 4.1e-45 184.9 134 73.9
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 4.1e-45 184.9 133 69.9
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.3e-45 184.5 133 69.2
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 5.3e-45 184.5 137 68.6
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 5.3e-45 184.5 134 69.4
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 7.0e-45 184.1 129 70.5
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 7.0e-45 184.1 129 70.5
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 9.1e-45 183.7 137 69.3
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 1.5e-44 183.0 134 73.9
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.0e-44 182.6 133 70.7
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.0e-44 182.6 133 68.4
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 2.6e-44 182.2 132 70.5
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 5.9e-44 181.0 135 68.9
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 2.2e-43 179.1 137 69.3
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 2.9e-43 178.7 136 66.9
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 2.9e-43 178.7 135 67.4
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 8.5e-43 177.2 137 66.4
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 1.1e-42 176.8 134 67.9
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 2.5e-42 175.6 133 65.4
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 4.2e-42 174.9 131 67.9
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 5.5e-42 174.5 134 70.1
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 1.6e-41 172.9 142 63.4
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 1.6e-41 172.9 133 66.9
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 3.6e-41 171.8 130 70.0
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 4.7e-41 171.4 120 73.3
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 8.0e-41 170.6 135 64.4
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 1.0e-40 170.2 130 66.9
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 1.4e-40 169.9 130 66.9
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 1.8e-40 169.5 134 64.9
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 2.3e-40 169.1 135 64.4
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 1.5e-39 166.4 115 71.3
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 2.0e-39 166.0 131 64.9
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 5.7e-39 164.5 137 62.8
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 7.4e-39 164.1 123 68.3
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 7.4e-39 164.1 133 62.4
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 9.7e-39 163.7 134 63.4
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 9.7e-39 163.7 131 62.6
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 1.3e-38 163.3 135 60.7
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 1.7e-38 162.9 131 60.3
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 2.2e-38 162.5 128 68.0
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 2.2e-38 162.5 136 63.2
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 4.8e-38 161.4 121 66.9
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 8.2e-38 160.6 135 58.5
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.1e-37 160.2 136 61.0
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 1.1e-37 160.2 136 61.0
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 1.4e-37 159.8 137 57.7
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 1.8e-37 159.5 136 57.4
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 2.4e-37 159.1 133 58.6
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 2.4e-37 159.1 138 56.5
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 2.4e-37 159.1 133 58.6
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 3.1e-37 158.7 137 55.5
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 4.1e-37 158.3 137 61.3
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 7.0e-37 157.5 133 58.6
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 9.1e-37 157.1 123 64.2
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 9.1e-37 157.1 136 60.3
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 1.2e-36 156.8 137 60.6
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 2.0e-36 156.0 126 62.7
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 1.0e-35 153.7 134 64.2
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 1.7e-35 152.9 134 56.7
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 1.7e-35 152.9 124 61.3
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 2.2e-35 152.5 134 60.4
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 2.2e-35 152.5 121 63.6
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 2.9e-35 152.1 123 62.6
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 6.5e-35 151.0 127 60.6
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 8.5e-35 150.6 136 55.9
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 1.2e-33 146.7 113 61.9
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 3.6e-33 145.2 121 60.3
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 1.4e-32 143.3 122 59.0
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.8e-32 142.9 119 59.7
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 1.8e-32 142.9 136 57.4
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 4.0e-32 141.7 129 57.4
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 1.3e-30 136.7 124 59.7
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 1.3e-30 136.7 130 55.4
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 6.3e-30 134.4 129 55.0
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.1e-29 133.7 108 62.0
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.8e-29 132.9 124 59.7
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.8e-29 132.9 115 60.0
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 1.2e-28 130.2 99 65.7
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 7.2e-26 120.9 134 52.2
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 2.7e-25 119.0 91 68.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.8e-24 116.3 93 63.4
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 8.3e-22 107.5 130 44.6
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 5.4e-21 104.8 124 46.0
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 2.7e-20 102.4 128 45.3
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 1.4e-16 90.1 129 41.9
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 2.1e-09 66.2 55 63.6
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.7e-06 56.6 70 51.4


User provided reference genes

Program Settings