Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 5.3e-107 391.0 189 100.0
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.8e-84 315.5 154 98.7
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 2.8e-76 288.9 169 85.2
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 2.7e-66 255.8 167 74.9
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.7e-65 253.1 141 85.1
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 1.7e-57 226.5 165 66.7
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 1.1e-56 223.8 164 65.2
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 4.7e-55 218.4 163 65.0
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 3.1e-54 215.7 179 60.9
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 4.0e-54 215.3 141 73.8
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 5.2e-54 214.9 170 61.2
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.2e-53 213.8 179 60.3
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.2e-53 213.8 161 66.5
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 2.6e-53 212.6 158 65.2
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 2.6e-53 212.6 143 68.5
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 3.4e-53 212.2 149 69.8
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.4e-53 212.2 161 65.8
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 5.8e-53 211.5 154 67.5
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 1.7e-52 209.9 137 70.8
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.7e-52 209.9 135 74.8
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 2.9e-52 209.1 137 74.5
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.7e-52 208.8 188 59.0
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 3.7e-52 208.8 154 64.9
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 3.7e-52 208.8 134 76.1
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 4.9e-52 208.4 163 62.0
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 4.9e-52 208.4 141 69.5
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 4.9e-52 208.4 156 64.1
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 6.4e-52 208.0 137 70.1
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 8.3e-52 207.6 149 65.1
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 1.1e-51 207.2 182 57.1
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.1e-51 207.2 137 69.3
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 1.4e-51 206.8 137 69.3
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.4e-51 206.8 134 70.9
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 1.9e-51 206.5 137 69.3
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.4e-51 206.1 137 69.3
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 2.4e-51 206.1 146 70.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 3.2e-51 205.7 137 67.9
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 3.2e-51 205.7 137 67.9
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 3.2e-51 205.7 137 67.9
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 4.1e-51 205.3 165 64.2
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 4.1e-51 205.3 149 64.4
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 4.1e-51 205.3 149 65.8
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 5.4e-51 204.9 142 69.0
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.2e-50 203.8 149 65.1
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 1.6e-50 203.4 137 68.6
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 1.6e-50 203.4 137 68.6
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 1.6e-50 203.4 179 58.7
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 2.1e-50 203.0 137 67.9
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 2.1e-50 203.0 149 65.1
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 2.1e-50 203.0 154 63.6
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 2.7e-50 202.6 186 54.3
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 3.5e-50 202.2 155 65.2
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 4.6e-50 201.8 134 70.9
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 6.0e-50 201.4 150 65.3
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 7.8e-50 201.1 149 65.8
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 7.8e-50 201.1 163 58.9
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 7.8e-50 201.1 134 70.1
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 1.0e-49 200.7 140 68.6
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.0e-49 200.7 165 57.6
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.3e-49 200.3 159 61.0
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 1.3e-49 200.3 184 58.7
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 2.3e-49 199.5 145 65.5
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 2.3e-49 199.5 150 63.3
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 2.3e-49 199.5 167 62.3
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 3.0e-49 199.1 134 70.1
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 3.0e-49 199.1 134 70.1
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 5.1e-49 198.4 149 65.1
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 1.1e-48 197.2 134 67.2
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.1e-48 197.2 137 70.1
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.5e-48 196.8 134 69.4
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.9e-48 196.4 145 64.8
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 1.9e-48 196.4 137 66.4
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 2.5e-48 196.1 180 54.4
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 2.5e-48 196.1 184 53.8
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 7.3e-48 194.5 137 67.9
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 9.5e-48 194.1 134 70.1
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 9.5e-48 194.1 137 65.0
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.2e-47 193.7 137 66.4
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.8e-47 192.6 160 60.6
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 4.7e-47 191.8 137 64.2
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 8.1e-47 191.0 137 65.0
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.4e-46 190.3 143 67.1
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 3.1e-46 189.1 137 63.5
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 3.4e-45 185.7 160 58.1
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.4e-43 180.3 160 55.6
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 7.1e-43 177.9 174 54.6
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 6.0e-42 174.9 123 67.5
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 7.8e-42 174.5 138 62.3
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 3.0e-41 172.6 149 59.1
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 6.6e-41 171.4 141 61.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.5e-40 170.2 137 59.9
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.5e-40 169.5 151 58.3
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.3e-40 169.1 134 59.7
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 3.1e-38 162.5 125 63.2
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 5.3e-38 161.8 128 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 4.4e-37 158.7 134 56.7
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 3.2e-35 152.5 165 48.5
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 6.0e-34 148.3 135 58.5
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 2.6e-29 132.9 103 63.1
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.9e-28 129.4 103 60.2
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.7e-20 103.6 118 51.7
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 9.3e-19 97.8 143 37.8
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.2e-18 97.4 105 49.5
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 8.7e-17 91.3 63 65.1
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 2.8e-15 86.3 63 71.4
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 4.2e-11 72.4 85 50.6
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 9.0e-06 54.7 31 77.4


User provided reference genes

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