Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 6.2e-72 274.2 161 100.0
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 1.6e-67 259.6 183 87.4
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 6.4e-61 237.7 166 89.8
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 5.6e-57 224.6 163 74.8
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 2.7e-51 205.7 164 70.7
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-50 203.4 161 64.6
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.9e-49 199.5 161 64.0
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.9e-49 199.5 161 64.0
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 9.6e-49 197.2 161 63.4
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 2.8e-48 195.7 165 64.8
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 3.7e-48 195.3 163 68.7
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 3.7e-48 195.3 161 62.7
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 3.1e-47 192.2 167 61.7
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 3.1e-47 192.2 161 62.1
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 4.0e-47 191.8 163 63.8
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 6.9e-47 191.0 169 63.3
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 6.9e-47 191.0 163 60.1
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 9.0e-47 190.7 161 60.2
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 2.0e-46 189.5 167 60.5
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 4.5e-46 188.3 163 63.8
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 4.5e-46 188.3 93 93.5
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 7.6e-46 187.6 92 94.6
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 7.6e-46 187.6 166 68.1
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 9.9e-46 187.2 170 58.2
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 1.3e-45 186.8 161 73.3
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 1.3e-45 186.8 104 86.5
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 1.3e-45 186.8 96 88.5
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.3e-45 186.8 161 60.9
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 1.7e-45 186.4 164 70.1
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 1.7e-45 186.4 161 59.6
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 1.7e-45 186.4 166 70.5
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 4.9e-45 184.9 161 62.1
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 4.9e-45 184.9 160 62.5
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 6.4e-45 184.5 92 91.3
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 6.4e-45 184.5 170 59.4
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 6.4e-45 184.5 170 59.4
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 6.4e-45 184.5 161 61.5
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 8.4e-45 184.1 97 87.6
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 8.4e-45 184.1 160 60.0
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 8.4e-45 184.1 162 60.5
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 1.1e-44 183.7 97 85.6
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 1.1e-44 183.7 167 70.7
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.1e-44 183.7 162 68.5
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 1.1e-44 183.7 162 68.5
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 1.1e-44 183.7 171 65.5
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 1.1e-44 183.7 165 60.0
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 1.9e-44 183.0 94 89.4
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 3.2e-44 182.2 92 89.1
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 3.2e-44 182.2 161 59.0
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 4.2e-44 181.8 94 88.3
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 4.2e-44 181.8 93 88.2
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 4.2e-44 181.8 163 61.3
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 5.5e-44 181.4 93 90.3
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 9.3e-44 180.6 94 87.2
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 9.3e-44 180.6 93 87.1
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 9.3e-44 180.6 162 66.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 9.3e-44 180.6 164 62.8
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 1.6e-43 179.9 95 84.2
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 2.7e-43 179.1 165 60.0
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 2.7e-43 179.1 92 85.9
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 3.5e-43 178.7 165 58.8
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 3.5e-43 178.7 172 68.6
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 3.5e-43 178.7 158 65.2
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 6.0e-43 177.9 162 63.6
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 7.9e-43 177.6 165 64.8
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 7.9e-43 177.6 161 60.9
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.3e-42 176.8 165 59.4
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 1.3e-42 176.8 162 67.3
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 3.0e-42 175.6 162 63.0
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 3.9e-42 175.3 161 61.5
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 6.7e-42 174.5 94 85.1
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 6.7e-42 174.5 170 70.0
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 1.9e-41 172.9 92 87.0
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 3.3e-41 172.2 89 87.6
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 5.6e-41 171.4 154 71.4
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 7.4e-41 171.0 154 61.0
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 7.4e-41 171.0 92 85.9
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 9.6e-41 170.6 86 89.5
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 1.3e-40 170.2 93 82.8
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 1.1e-39 167.2 84 90.5
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.4e-39 166.8 153 59.5
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 1.8e-39 166.4 159 57.2
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 1.8e-39 166.4 156 59.6
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 5.3e-39 164.9 152 69.1
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 6.9e-39 164.5 86 88.4
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 2.6e-38 162.5 88 83.0
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 1.3e-37 160.2 83 88.0
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 2.2e-37 159.5 80 86.2
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 3.2e-36 155.6 81 88.9
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 3.0e-34 149.1 181 55.8
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 8.7e-34 147.5 87 75.9
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.1e-33 147.1 80 85.0
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 1.9e-33 146.4 92 77.2
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 1.9e-33 146.4 82 80.5
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 3.7e-32 142.1 75 86.7
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 8.2e-32 141.0 79 79.7
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 1.1e-31 140.6 90 71.1
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 1.4e-31 140.2 77 83.1
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 3.4e-30 135.6 68 88.2
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 5.0e-29 131.7 88 69.3
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 4.2e-28 128.6 140 54.3
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 2.2e-21 106.3 54 92.6
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 1.0e-18 97.4 119 58.0


User provided reference genes

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