Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g005060.2 Solanum lycopersicum HOM05D006122 ORTHO05D007426 1.5e-132 476.1 229 100.0
Sopen11g001060 Solanum pennellii HOM05D006122 ORTHO05D007426 1.2e-129 466.5 243 94.2
CAN.G1227.1 Capsicum annuum HOM05D006122 ORTHO05D007426 1.7e-123 446.0 227 95.2
Peaxi162Scf01003g00013 Petunia axillaris HOM05D006122 ORTHO05D007426 2.9e-123 445.3 226 92.5
Nitab4.5_0001168g0090 Nicotiana tabacum HOM05D006122 ORTHO05D007426 2.9e-115 418.7 208 93.3
Cfa003494 Carpinus fangiana HOM05D006122 ORTHO05D007426 3.9e-112 408.3 225 83.6
Ciclev10026416m.g Citrus clementina HOM05D006122 ORTHO05D007426 3.9e-112 408.3 225 84.4
DCAR_022657 Daucus carota HOM05D006122 ORTHO05D007426 1.1e-111 406.8 225 82.7
CSS0025263 Camellia sinensis var. sinensis HOM05D006122 ORTHO05D007426 7.4e-111 404.1 229 83.0
Dinv37838 Davidia involucrata HOM05D006122 ORTHO05D007426 2.1e-110 402.5 225 82.7
Thecc.06G126900 Theobroma cacao HOM05D006122 ORTHO05D007426 4.8e-110 401.4 225 83.6
CiPaw.02G133000 Carya illinoinensis HOM05D006122 ORTHO05D007426 1.1e-109 400.2 229 82.1
TAR383G0669 Trochodendron aralioides HOM05D006122 ORTHO05D007426 1.1e-109 400.2 225 83.1
Prupe.3G035300 Prunus persica HOM05D006122 ORTHO05D007426 1.4e-109 399.8 225 82.2
Migut.I01117 Erythranthe guttata HOM05D006122 ORTHO05D007426 2.4e-109 399.1 225 80.4
MSTRG.22530 Avicennia marina HOM05D006122 ORTHO05D007426 4.0e-109 398.3 225 81.8
Hma1.2p1_0229F.1_g096920 Hydrangea macrophylla HOM05D006122 ORTHO05D007426 2.6e-108 395.6 225 80.9
Eucgr.J02608 Eucalyptus grandis HOM05D006122 ORTHO05D007426 9.9e-108 393.7 225 81.8
PGR102G1167 Punica granatum HOM05D006122 ORTHO05D007426 9.9e-108 393.7 225 80.4
MD17G1150700 Malus domestica HOM05D006122 ORTHO05D007426 1.7e-107 392.9 225 80.9
Actinidia26007 Actinidia chinensis HOM05D006122 ORTHO05D007426 2.9e-107 392.1 225 80.9
COL.COLO4_30828 Corchorus olitorius HOM05D006122 ORTHO05D007426 6.4e-107 391.0 225 79.6
RcHm_v2.0_Chr2g0146911 Rosa chinensis HOM05D006122 ORTHO05D007426 1.1e-106 390.2 225 81.8
FvH4_6g35380 Fragaria vesca HOM05D006122 ORTHO05D007426 1.9e-106 389.4 225 81.8
Manes.11G015100 Manihot esculenta HOM05D006122 ORTHO05D007426 1.9e-106 389.4 225 80.4
AL1G29610 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 2.5e-106 389.0 226 77.9
GSVIVG01016699001 Vitis vinifera HOM05D006122 ORTHO05D007426 2.5e-106 389.0 225 79.6
MD09G1176300 Malus domestica HOM05D006122 ORTHO05D007426 3.2e-106 388.7 225 79.6
Duzib235G1006 Durio zibethinus HOM05D006122 ORTHO05D007426 4.2e-106 388.3 225 80.4
CARHR017950 Cardamine hirsuta HOM05D006122 ORTHO05D007426 7.1e-106 387.5 226 77.4
Gohir.A05G138000 Gossypium hirsutum HOM05D006122 ORTHO05D007426 1.2e-105 386.7 225 78.2
AT1G17350 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 2.1e-105 386.0 226 77.0
Cc04_g00910 Coffea canephora HOM05D006122 ORTHO05D007426 4.6e-105 384.8 226 76.5
Gorai.009G144400 Gossypium raimondii HOM05D006122 ORTHO05D007426 4.6e-105 384.8 225 77.8
Os01g0727400 Oryza sativa ssp. japonica HOM05D006122 ORTHO05D007426 4.6e-105 384.8 229 78.2
Sabra10G0032200 Salix brachista HOM05D000989 ORTHO05D001287 4.6e-105 384.8 223 80.7
Carub.0001s1711 Capsella rubella HOM05D006122 ORTHO05D007426 6.0e-105 384.4 226 77.0
AUR62018816 Chenopodium quinoa HOM05D006122 ORTHO05D007426 6.0e-105 384.4 234 76.9
Thhalv10008577m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 7.9e-105 384.0 226 76.5
Gohir.D05G140100 Gossypium hirsutum HOM05D006122 ORTHO05D007426 1.3e-104 383.3 225 77.8
Potri.010G076600 Populus trichocarpa HOM05D006122 ORTHO05D007426 1.3e-104 383.3 225 80.0
vmacro22018 Vaccinium macrocarpon HOM05D006122 ORTHO05D007426 1.8e-104 382.9 237 76.4
ECA238G0672 Erigeron canadensis HOM05D006122 ORTHO05D007426 3.0e-104 382.1 225 78.2
Sp1g15490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 3.9e-104 381.7 226 76.1
SpUn0033_0060 Schrenkiella parvula HOM05D006122 ORTHO05D007426 3.9e-104 381.7 226 76.1
A06p13310 Brassica napus HOM05D006122 ORTHO05D007426 1.1e-103 380.2 233 75.5
Hund14473 Selenicereus undatus HOM05D006122 ORTHO05D007426 1.5e-103 379.8 250 73.6
CANSAT56G0704 Cannabis sativa HOM05D006122 ORTHO05D007426 2.5e-103 379.0 225 75.6
HanXRQChr09g0277171 Helianthus annuus HOM05D006122 ORTHO05D007426 4.3e-103 378.3 225 76.9
QL05p002004 Quercus lobata HOM05D006122 ORTHO05D007426 5.6e-103 377.9 225 77.8
SGA_v2.0_scaffold71G23902 Striga asiatica HOM05D006122 ORTHO05D007426 9.6e-103 377.1 243 73.7
Rhsim12G0212300 Rhododendron simsii HOM05D006122 ORTHO05D007426 1.3e-102 376.7 274 67.2
BraA06t24484Z Brassica rapa HOM05D006122 ORTHO05D007426 1.6e-102 376.3 231 75.8
BcaNung07320 Brassica carinata HOM05D006122 ORTHO05D007426 2.1e-102 375.9 226 77.0
PSO063G2922 Papaver somniferum HOM05D006122 ORTHO05D007426 2.1e-102 375.9 226 77.9
C05p15780 Brassica napus HOM05D006122 ORTHO05D007426 6.2e-102 374.4 233 75.1
BolC5t30283H Brassica oleracea HOM05D006122 ORTHO05D007426 6.2e-102 374.4 233 75.1
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 6.2e-102 374.4 227 76.7
Lj3g0011237 Lotus japonicus HOM05D006122 ORTHO05D007426 6.2e-102 374.4 225 76.4
Glyma.07G043200 Glycine max HOM05D006122 ORTHO05D007426 1.1e-101 373.6 225 76.0
Glyma.16G011600 Glycine max HOM05D006122 ORTHO05D007426 1.4e-101 373.2 225 76.0
VMungo0331G0398 Vigna mungo HOM05D006122 ORTHO05D007426 1.4e-101 373.2 225 76.9
THA.LOC104812266 Tarenaya hassleriana HOM05D006122 ORTHO05D007426 1.8e-101 372.9 225 75.6
Phvul.010G126800 Phaseolus vulgaris HOM05D006122 ORTHO05D007426 2.4e-101 372.5 225 76.4
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 3.1e-101 372.1 227 76.2
AT1G72420 Arabidopsis thaliana HOM05D006122 ORTHO05D007426 5.3e-101 371.3 227 76.2
Aqoxy3G03460 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 9.0e-101 370.5 225 77.3
Lalb_Chr10g0101271 Lupinus albus HOM05D006122 ORTHO05D007426 1.5e-100 369.8 228 74.1
Sed0027026 Sechium edule HOM05D006122 ORTHO05D007426 2.0e-100 369.4 225 75.1
TWI59G0171 Tripterygium wilfordii HOM05D006122 ORTHO05D007426 2.6e-100 369.0 225 76.0
Psat4g219480 Pisum sativum HOM05D006122 ORTHO05D007426 3.4e-100 368.6 225 73.3
PSO832G0128 Papaver somniferum HOM05D006122 ORTHO05D007426 5.8e-100 367.9 225 76.4
CARHR065320 Cardamine hirsuta HOM05D006122 ORTHO05D007426 1.3e-99 366.7 227 74.4
EL10Ac5g12242 Beta vulgaris HOM05D006122 ORTHO05D007426 1.7e-99 366.3 223 77.6
unitig_32.g10995 Utricularia gibba HOM05D006122 ORTHO05D007426 4.9e-99 364.8 225 73.8
ATR0068G105 Amborella trichopoda HOM05D006122 ORTHO05D007426 8.4e-99 364.0 225 73.8
Thhalv10019098m.g Eutrema salsugineum HOM05D006122 ORTHO05D007426 1.1e-98 363.6 227 75.3
Medtr8g022330 Medicago truncatula HOM05D006122 ORTHO05D007426 1.4e-98 363.2 225 72.4
Ca_23414_v3 Cicer arietinum L. HOM05D006122 ORTHO05D007426 5.5e-98 361.3 214 76.2
Zm00001eb361800 Zea mays HOM05D006122 ORTHO05D007426 5.5e-98 361.3 230 74.8
Lj5A31T62 Lonicera japonica HOM05D006122 ORTHO05D007426 7.1e-98 360.9 227 73.1
HPP92_026812 Vanilla planifolia HOM05D006122 ORTHO05D007426 7.1e-98 360.9 225 74.2
CsaV3_4G002610 Cucumis sativus L. HOM05D006122 ORTHO05D007426 7.9e-97 357.5 225 72.0
Ah.07g199940 Amaranthus hybridus HOM05D006122 ORTHO05D007426 7.4e-95 350.9 211 76.8
MELO3C017781.2 Cucumis melo HOM05D006122 ORTHO05D007426 1.3e-94 350.1 208 76.4
Lsat_1_v5_gn_8_4120 Lactuca sativa HOM05D006122 ORTHO05D007426 1.8e-93 346.3 226 72.6
arahy.Tifrunner.gnm1.ann1.JC3XNH Arachis hypogaea HOM05D006122 ORTHO05D007426 4.1e-93 345.1 227 70.0
arahy.Tifrunner.gnm1.ann1.DIA1Z1 Arachis hypogaea HOM05D006122 ORTHO05D007426 1.2e-92 343.6 227 69.6
HPP92_000787 Vanilla planifolia HOM05D006122 ORTHO05D007426 2.6e-92 342.4 208 74.5
Oeu000384.1 Olea europaea HOM05D006122 ORTHO05D007426 7.9e-89 330.9 229 69.0
CDE02G1839 Ceratophyllum demersum HOM05D006122 ORTHO05D007426 9.7e-87 323.9 225 66.2
Aa31LG4G2750 Aethionema arabicum HOM05D006122 ORTHO05D007426 1.0e-83 313.9 215 70.2
MBI13_g36947_MAGBIO Magnolia biondii HOM05D006122 ORTHO05D007426 1.1e-77 293.9 169 80.5
AUR62007187 Chenopodium quinoa HOM05D006122 ORTHO05D007426 1.5e-76 290.0 261 57.9
A07p38600 Brassica napus HOM05D006122 ORTHO05D007426 6.5e-75 284.6 243 61.7
Duzib160G0673 Durio zibethinus HOM05D006122 ORTHO05D007426 8.5e-75 284.3 166 80.1
C06p46770 Brassica napus HOM05D006122 ORTHO05D007426 4.2e-74 282.0 232 62.9
Sc01g0007910 Simmondsia chinensis HOM05D006122 ORTHO05D007426 1.6e-73 280.0 159 81.1
BolC6t39721H Brassica oleracea HOM05D006122 ORTHO05D007426 8.8e-72 274.2 250 57.2
BraA07t31418Z Brassica rapa HOM05D006122 ORTHO05D007426 5.7e-71 271.6 270 55.2
TPR.G16670 Trifolium pratense HOM05D006122 ORTHO05D007426 4.8e-70 268.5 166 72.9
FAN09G0799 Fragaria x ananassa HOM05D006122 ORTHO05D007426 1.7e-67 260.0 157 79.0
Haze_16093 Corylus avellana HOM05D006122 ORTHO05D007426 2.5e-66 256.1 281 53.0
Haze_16097 Corylus avellana HOM05D006122 ORTHO05D007426 2.5e-66 256.1 281 53.0
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 4.7e-65 251.9 141 79.4
Aqoxy301s003 Aquilegia oxysepala HOM05D006122 ORTHO05D007426 6.1e-65 251.5 169 71.0
Nn1g04517 Nelumbo nucifera HOM05D006122 ORTHO05D007426 5.2e-64 248.4 225 57.8
Pp3c3_21840 Physcomitrium patens HOM05D006122 ORTHO05D007426 1.5e-63 246.9 222 52.3
Cpa.g.sc25.169 Carica papaya HOM05D006122 ORTHO05D007426 2.6e-63 246.1 225 56.9
FAN14G0976 Fragaria x ananassa HOM05D006122 ORTHO05D007426 2.6e-63 246.1 225 58.7
Mapoly0158s0026 Marchantia polymorpha HOM05D006122 ORTHO05D007426 5.0e-59 231.9 221 48.4
BcaB03g14991 Brassica carinata HOM05D006122 ORTHO05D007426 1.6e-57 226.9 142 72.5
SalBow5G3255 Salvia bowleyana HOM05D006122 ORTHO05D007426 4.7e-57 225.3 229 52.8
Nn4g23234 Nelumbo nucifera HOM05D006122 ORTHO05D007426 2.3e-56 223.0 133 76.7
CBR_g33997 Chara braunii HOM05D006122 ORTHO05D007426 1.8e-53 213.4 227 43.2
SalBow5G2173 Salvia bowleyana HOM05D006122 ORTHO05D007426 1.6e-52 210.3 147 68.7
SHI23560 Sapria himalayana HOM05D006122 ORTHO05D007426 1.4e-48 197.2 119 73.1
AagrBONN_evm.TU.Sc2ySwM_362.2335 Anthoceros agrestis HOM05D006122 ORTHO05D007426 2.9e-38 162.9 196 41.3
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 1.1e-37 161.0 93 76.3
SMO165G0005 Selaginella moellendorffii HOM05D006122 ORTHO05D007426 1.4e-32 144.1 198 34.8
CAN.G526.12 Capsicum annuum HOM05D006122 ORTHO05D007426 8.9e-32 141.4 156 51.9
MCO13G567 Micromonas commoda HOM05D006122 ORTHO05D007426 1.2e-23 114.4 272 27.2
Actinidia31156 Actinidia chinensis HOM05D006122 ORTHO05D007426 1.5e-23 114.0 99 57.6
BcaB03g14993 Brassica carinata HOM05D006122 ORTHO05D007426 1.3e-22 110.9 75 69.3
TPR.G16651 Trifolium pratense HOM05D006122 ORTHO05D007426 3.2e-21 106.3 67 70.1
Nn1g08880 Nelumbo nucifera HOM05D006122 ORTHO05D007426 2.3e-19 100.1 55 80.0
Cre02.g076750 Chlamydomonas reinhardtii HOM05D006122 ORTHO05D007426 5.8e-15 85.5 221 26.7
Actinidia31157 Actinidia chinensis HOM05D006122 ORTHO05D007426 1.6e-12 77.4 51 68.6
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 1.6e-09 67.4 170 27.6
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 6.2e-09 65.5 164 27.4
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 6.2e-09 65.5 164 27.4
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 8.1e-09 65.1 184 27.7
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 1.4e-08 64.3 164 26.8
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 1.8e-08 63.9 200 27.5
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 1.8e-08 63.9 184 27.7
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 2.4e-08 63.5 166 27.1
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 2.4e-08 63.5 184 27.7
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 3.1e-08 63.2 169 27.2
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 6.9e-08 62.0 181 24.9
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 9.0e-08 61.6 166 27.1
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 9.0e-08 61.6 154 28.6
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 1.2e-07 61.2 179 25.1
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 2.0e-07 60.5 182 24.2
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 2.6e-07 60.1 165 29.7
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 3.4e-07 59.7 184 27.2
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 5.8e-07 58.9 153 26.8
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 5.8e-07 58.9 164 26.2
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 5.8e-07 58.9 162 27.2
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 7.6e-07 58.5 182 27.5
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 7.6e-07 58.5 182 27.5
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 7.6e-07 58.5 152 25.7
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 9.9e-07 58.2 153 28.1
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 9.9e-07 58.2 182 27.5
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 9.9e-07 58.2 182 27.5
Pp3c26_9450 Physcomitrium patens HOM05D005310 ORTHO05D006920 9.9e-07 58.2 157 24.2
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 9.9e-07 58.2 152 26.3
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 1.3e-06 57.8 169 27.2
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 1.3e-06 57.8 152 25.7
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 1.3e-06 57.8 152 25.7
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 1.3e-06 57.8 153 26.1
RcHm_v2.0_Chr5g0011651 Rosa chinensis HOM05D005310 ORTHO05D006920 1.3e-06 57.8 151 27.8
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 2.2e-06 57.0 166 27.1
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 2.2e-06 57.0 153 27.5
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 2.2e-06 57.0 152 27.0
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 2.2e-06 57.0 152 26.3
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 2.9e-06 56.6 184 26.6
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 2.9e-06 56.6 172 25.6
Aqoxy1G01994 Aquilegia oxysepala HOM05D005310 ORTHO05D006920 3.8e-06 56.2 152 27.6
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 3.8e-06 56.2 153 25.5
PGR042G1369 Punica granatum HOM05D005310 ORTHO05D006920 6.4e-06 55.5 153 26.8
Atru.chr10.1571 Acer truncatum HOM05D005310 ORTHO05D006920 8.4e-06 55.1 153 26.8
ATR0012G016 Amborella trichopoda HOM05D005310 ORTHO05D006920 8.4e-06 55.1 191 23.0
CARHR225670 Cardamine hirsuta HOM05D005310 ORTHO05D006920 8.4e-06 55.1 172 26.2
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 8.4e-06 55.1 153 26.1
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 8.4e-06 55.1 171 25.7
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 8.4e-06 55.1 152 26.3


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