Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g150149.1 Solanum lycopersicum HOM05D007569 ORTHO05D009268 1.4e-47 192.6 92 100.0
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.2e-24 116.3 94 63.8
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 8.8e-23 110.2 80 68.8
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 3.7e-21 104.8 94 59.6
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 8.5e-18 93.6 92 62.0
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 1.2e-16 89.7 91 56.0
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 3.6e-16 88.2 90 52.2
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 2.3e-15 85.5 94 57.4
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 4.0e-15 84.7 93 50.5
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.2e-14 83.2 95 53.7
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.5e-14 82.8 87 54.0
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 9.8e-14 80.1 90 48.9
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 9.8e-14 80.1 80 52.5
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 1.0e-10 70.1 91 44.0
Solyc09g007480.3 Solanum lycopersicum HOM05D007569 ORTHO05D009268 1.0e-10 70.1 90 52.2
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 1.0e-10 70.1 77 50.6
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 3.3e-09 65.1 96 43.8
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 4.3e-09 64.7 97 49.5
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 5.6e-09 64.3 93 45.2
DCAR_020844 Daucus carota HOM05D007569 ORTHO05D009268 1.2e-08 63.2 55 58.2
Oeu060096.1 Olea europaea HOM05D007569 ORTHO05D009268 2.8e-08 62.0 64 51.6
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 3.6e-08 61.6 73 47.9
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 4.7e-08 61.2 77 41.6
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 8.0e-08 60.5 95 43.2
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 8.0e-08 60.5 93 43.0
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 8.0e-08 60.5 96 44.8
Oeu059987.1 Olea europaea HOM05D007569 ORTHO05D009268 1.0e-07 60.1 59 52.5
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 1.0e-07 60.1 94 40.4
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 1.8e-07 59.3 69 46.4
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 4.0e-07 58.2 90 43.3
Gorai.013G026900 Gossypium raimondii HOM05D007569 ORTHO05D009268 4.0e-07 58.2 85 41.2
Nn2g13029 Nelumbo nucifera HOM05D007569 ORTHO05D009268 4.0e-07 58.2 79 41.8
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 5.2e-07 57.8 61 54.1
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 6.8e-07 57.4 84 41.7
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 6.8e-07 57.4 72 43.1
Nn2g10705 Nelumbo nucifera HOM05D007569 ORTHO05D009268 6.8e-07 57.4 74 44.6
ECA248G1179 Erigeron canadensis HOM05D007569 ORTHO05D009268 1.2e-06 56.6 73 43.8
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 1.2e-06 56.6 92 44.6
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 1.2e-06 56.6 92 45.7
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 1.2e-06 56.6 91 41.8
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 1.2e-06 56.6 62 53.2
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 1.5e-06 56.2 92 41.3
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 2.0e-06 55.8 74 47.3
Peaxi162Scf00488g00927 Petunia axillaris HOM05D007569 ORTHO05D009268 2.6e-06 55.5 54 51.9
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 5.7e-06 54.3 65 46.2
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 5.7e-06 54.3 36 63.9
Aqoxy4G03229 Aquilegia oxysepala HOM05D007569 ORTHO05D009268 9.8e-06 53.5 44 52.3
AL6G12400 Arabidopsis lyrata HOM05D007569 ORTHO05D009268 9.8e-06 53.5 62 50.0
Gohir.D13G023800 Gossypium hirsutum HOM05D007569 ORTHO05D009268 9.8e-06 53.5 85 40.0


User provided reference genes

Program Settings