Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 1.5e-121 439.5 222 100.0
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 1.1e-116 423.3 222 96.8
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.3e-112 409.8 222 92.8
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 8.5e-88 327.4 222 74.8
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.6e-81 306.6 205 76.1
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 9.5e-63 244.2 225 56.9
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 4.7e-62 241.9 223 55.2
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 1.5e-60 236.9 225 55.6
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 1.5e-60 236.9 221 54.3
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 4.4e-60 235.3 218 55.5
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 3.7e-59 232.3 222 56.8
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.4e-58 230.3 222 55.0
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 1.2e-57 227.3 231 54.1
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 1.6e-57 226.9 223 54.3
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 4.5e-57 225.3 224 53.6
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 8.6e-56 221.1 224 54.9
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 4.3e-55 218.8 224 51.8
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 4.3e-55 218.8 224 55.8
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 4.3e-55 218.8 221 52.0
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 6.1e-54 214.9 234 51.7
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 2.0e-52 209.9 254 48.8
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 2.0e-52 209.9 224 53.1
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 7.5e-52 208.0 209 52.2
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 9.8e-52 207.6 226 52.7
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 8.3e-51 204.5 221 51.6
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 1.8e-50 203.4 220 49.5
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 2.4e-50 203.0 222 52.3
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 4.6e-49 198.7 231 48.5
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 7.8e-49 198.0 228 50.0
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 8.6e-48 194.5 213 49.8
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 8.6e-48 194.5 234 48.3
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.1e-47 194.1 223 47.5
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-47 193.0 220 50.5
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 2.5e-47 193.0 220 50.5
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.6e-46 190.3 244 46.3
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 3.1e-45 186.0 258 45.7
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 6.8e-45 184.9 246 45.9
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 2.0e-44 183.3 265 42.6
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 4.4e-44 182.2 248 46.8
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 2.0e-41 173.3 225 47.6
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 3.5e-41 172.6 222 46.4
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.1e-39 167.5 222 46.8
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 5.6e-39 165.2 251 41.8
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 3.1e-37 159.5 224 47.8
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.3e-35 154.1 238 42.9
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 3.7e-35 152.5 228 43.0
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 7.1e-34 148.3 127 62.2
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 1.1e-29 134.4 185 46.5
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.5e-28 130.6 261 39.5
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 1.4e-26 124.0 200 39.0
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 6.0e-25 118.6 164 45.7
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 6.6e-24 115.2 165 46.7
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 4.3e-23 112.5 161 45.3
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 4.3e-23 112.5 161 45.3
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 4.3e-23 112.5 161 44.7
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.2e-22 110.9 166 43.4
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 6.2e-22 108.6 212 37.3
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 9.9e-20 101.3 158 43.7
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 4.2e-18 95.9 147 42.9
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.0e-16 91.3 75 54.7
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 3.0e-16 89.7 71 60.6
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 2.0e-12 77.0 74 54.1
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 8.7e-08 61.6 49 59.2


User provided reference genes

Program Settings