Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 1.6e-62 242.7 127 100.0
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 4.7e-59 231.1 127 96.1
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.7e-53 212.6 130 89.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 1.9e-47 192.6 132 80.3
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.3e-45 185.7 133 77.4
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 3.9e-45 184.9 136 75.7
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.7e-40 169.5 140 65.7
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 1.3e-37 159.8 93 87.1
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 1.8e-37 159.5 95 84.2
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 3.9e-37 158.3 120 69.2
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 5.1e-37 157.9 110 75.5
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 5.1e-37 157.9 110 75.5
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 8.7e-37 157.1 97 84.5
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 8.7e-37 157.1 95 82.1
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 8.7e-37 157.1 97 79.4
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 1.1e-36 156.8 117 72.6
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 1.9e-36 156.0 105 77.1
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 1.9e-36 156.0 105 77.1
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 4.3e-36 154.8 98 81.6
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 7.4e-36 154.1 126 65.9
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 7.4e-36 154.1 111 73.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.3e-35 153.3 112 69.6
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 1.3e-35 153.3 107 74.8
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 2.1e-35 152.5 105 75.2
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 2.1e-35 152.5 95 84.2
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 2.8e-35 152.1 94 80.9
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 2.8e-35 152.1 95 80.0
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.8e-35 152.1 109 72.5
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 2.8e-35 152.1 126 67.5
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 3.7e-35 151.8 122 68.9
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 3.7e-35 151.8 109 73.4
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 4.8e-35 151.4 110 71.8
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 4.8e-35 151.4 95 77.9
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 6.2e-35 151.0 102 74.5
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 6.2e-35 151.0 130 64.6
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 8.1e-35 150.6 95 81.1
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 1.4e-34 149.8 93 81.7
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.4e-34 149.8 127 65.4
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.4e-34 149.8 101 75.2
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.8e-34 149.4 93 79.6
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 1.8e-34 149.4 127 62.2
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.8e-34 149.4 127 62.2
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 2.4e-34 149.1 122 68.0
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 2.4e-34 149.1 127 64.6
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 3.1e-34 148.7 127 62.2
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 3.1e-34 148.7 114 70.2
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 3.1e-34 148.7 93 78.5
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 4.0e-34 148.3 123 68.3
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 4.0e-34 148.3 116 68.1
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 4.0e-34 148.3 95 80.0
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 5.3e-34 147.9 95 78.9
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 6.9e-34 147.5 123 67.5
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 9.0e-34 147.1 108 70.4
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 9.0e-34 147.1 116 69.0
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.2e-33 146.7 110 70.9
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.5e-33 146.4 93 76.3
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 2.0e-33 146.0 105 71.4
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.0e-33 146.0 127 61.4
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 2.0e-33 146.0 95 77.9
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 2.0e-33 146.0 95 75.8
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 2.6e-33 145.6 93 76.3
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.5e-33 144.8 127 59.8
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 4.5e-33 144.8 116 68.1
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 5.8e-33 144.4 100 72.0
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 5.8e-33 144.4 97 77.3
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 9.9e-33 143.7 84 84.5
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 9.9e-33 143.7 95 74.7
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 1.7e-32 142.9 100 71.0
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 1.7e-32 142.9 101 70.3
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.7e-32 142.9 96 76.0
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 1.7e-32 142.9 93 75.3
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.7e-32 142.9 86 83.7
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 2.2e-32 142.5 108 69.4
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 2.9e-32 142.1 93 75.3
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 2.9e-32 142.1 83 84.3
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 2.9e-32 142.1 126 61.1
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 2.9e-32 142.1 122 63.9
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 3.8e-32 141.7 85 80.0
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 4.9e-32 141.4 118 61.9
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 8.4e-32 140.6 91 76.9
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.1e-31 140.2 90 80.0
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 1.1e-31 140.2 83 81.9
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.1e-31 140.2 111 68.5
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.1e-31 140.2 111 67.6
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 2.4e-31 139.0 127 60.6
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.4e-31 139.0 110 66.4
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.4e-31 139.0 110 66.4
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.2e-31 138.3 92 73.9
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 4.2e-31 138.3 88 77.3
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 7.1e-31 137.5 135 63.0
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 7.1e-31 137.5 132 59.8
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 7.1e-31 137.5 94 68.1
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 7.1e-31 137.5 93 74.2
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 9.3e-31 137.1 132 60.6
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.2e-30 136.7 94 73.4
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 4.6e-30 134.8 84 79.8
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 1.1e-28 130.2 85 72.9
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 5.6e-28 127.9 105 68.6
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 9.6e-28 127.1 85 75.3
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 2.1e-27 125.9 85 76.5
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 2.8e-27 125.6 89 68.5
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 1.4e-23 113.2 100 63.0
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 6.7e-21 104.4 112 56.2
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 2.1e-14 82.8 47 83.0
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 3.3e-12 75.5 47 76.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 5.9e-09 64.7 47 68.1
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 3.8e-08 62.0 40 75.0


User provided reference genes

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