Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 8.2e-138 493.8 265 100.0
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 5.9e-136 487.6 265 98.5
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 9.7e-131 470.3 265 94.3
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 9.7e-131 470.3 265 94.3
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 2.2e-127 459.1 253 98.8
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 4.1e-121 438.3 265 85.7
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 7.0e-121 437.6 265 86.0
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 7.0e-121 437.6 265 86.0
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 9.1e-121 437.2 265 86.0
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 2.6e-120 435.6 265 85.7
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 3.5e-120 435.3 265 86.0
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 7.7e-120 434.1 265 86.0
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.7e-120 434.1 265 84.9
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 7.7e-120 434.1 265 85.7
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 2.9e-119 432.2 241 96.3
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 85.3
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 86.8
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 5.0e-119 431.4 265 85.7
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 8.5e-119 430.6 265 85.3
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 3.2e-118 428.7 265 84.2
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 3.2e-118 428.7 263 85.6
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.9
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 5.5e-118 427.9 265 84.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 7.2e-118 427.6 265 85.3
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 9.4e-118 427.2 265 83.8
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 9.4e-118 427.2 265 84.2
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.2e-117 426.8 265 84.2
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 1.6e-117 426.4 265 84.9
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 3.6e-117 425.2 265 84.5
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 4.7e-117 424.9 262 83.6
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 4.7e-117 424.9 265 83.4
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 6.1e-117 424.5 264 84.1
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 1.0e-116 423.7 265 84.2
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 82.6
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 1.8e-116 422.9 265 83.0
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 2.3e-116 422.5 263 84.8
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 84.2
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 82.6
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 5.2e-116 421.4 265 83.0
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 1.5e-115 419.9 265 83.4
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 1.5e-115 419.9 265 83.8
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 2.6e-115 419.1 278 80.6
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 4.4e-115 418.3 264 83.0
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 4.4e-115 418.3 265 82.6
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 9.7e-115 417.2 274 81.8
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 9.7e-115 417.2 263 82.9
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 1.3e-114 416.8 265 81.5
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.7e-114 416.4 260 83.1
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.7e-114 416.4 260 83.1
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 2.2e-114 416.0 260 83.1
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 2.2e-114 416.0 258 84.1
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 3.7e-114 415.2 264 82.2
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 3.7e-114 415.2 263 81.7
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 4.8e-114 414.8 264 81.8
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 1.4e-113 413.3 264 81.8
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.4e-113 413.3 260 82.7
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.4e-113 413.3 260 82.7
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 4.1e-113 411.8 255 84.3
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 4.1e-113 411.8 265 80.8
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 5.3e-113 411.4 262 81.7
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 9.1e-113 410.6 265 81.9
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 1.2e-112 410.2 261 79.7
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 1.6e-112 409.8 262 81.3
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-112 409.8 262 81.7
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 2.0e-112 409.5 262 81.3
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 2.6e-112 409.1 265 80.0
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 2.6e-112 409.1 272 79.0
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 3.5e-112 408.7 258 84.1
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 4.5e-112 408.3 262 80.5
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 7.7e-112 407.5 260 81.2
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 7.7e-112 407.5 260 81.2
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 1.3e-111 406.8 263 80.2
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 1.7e-111 406.4 265 80.4
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 2.2e-111 406.0 259 81.1
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.9e-111 405.6 263 81.4
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 8.5e-111 404.1 253 84.2
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 1.1e-110 403.7 265 80.0
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.1e-110 403.7 263 80.6
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 1.1e-110 403.7 263 80.6
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 1.5e-110 403.3 263 79.5
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 1.5e-110 403.3 263 81.0
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 1.9e-110 402.9 263 79.8
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 4.2e-110 401.7 258 82.6
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 5.5e-110 401.4 262 78.6
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 7.2e-110 401.0 262 79.8
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 7.2e-110 401.0 262 77.5
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 1.6e-109 399.8 263 81.7
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 2.7e-109 399.1 259 81.5
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 8.0e-109 397.5 263 77.9
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 1.0e-108 397.1 258 81.4
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.4e-108 396.7 265 79.2
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.4e-108 396.7 262 80.2
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.8e-108 396.4 253 84.2
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 8.8e-108 394.0 251 82.9
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.5e-107 393.3 253 83.8
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 2.0e-107 392.9 286 75.5
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 3.3e-107 392.1 287 76.0
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 9.7e-107 390.6 259 79.5
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 2.4e-105 386.0 257 77.8
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 3.1e-105 385.6 262 76.0
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 1.6e-104 383.3 264 75.8
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.0e-103 380.6 259 76.8
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 2.2e-103 379.4 238 83.6
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 5.0e-103 378.3 225 88.0
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 1.5e-102 376.7 257 78.6
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 4.7e-101 371.7 225 86.2
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 4.0e-100 368.6 265 72.5
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 2.6e-99 365.9 265 75.1
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.8e-98 362.5 262 71.4
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 1.4e-97 360.1 264 71.2
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 2.0e-96 356.3 262 69.8
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.2e-93 347.1 262 67.9
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 2.3e-92 342.8 265 72.1
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 5.7e-91 338.2 258 68.6
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.2e-83 313.9 252 67.5
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.5e-83 313.5 212 80.2
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 3.1e-76 289.3 265 65.7
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-67 260.8 254 55.1
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 4.1e-65 252.3 179 73.2
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.0e-64 248.4 161 79.5
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.2e-61 240.7 152 84.2
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 3.8e-58 229.2 154 81.8
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.4e-52 209.9 265 50.9
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.5e-51 207.2 245 42.4
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 5.1e-47 192.2 252 41.3
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 1.3e-39 167.5 235 43.0
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 5.3e-36 155.6 98 78.6
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.6e-32 144.1 96 78.1
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 5.1e-31 139.0 239 34.7
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 1.1e-30 137.9 119 63.9
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-30 137.9 77 94.8
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 5.3e-28 129.0 75 90.7
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 7.9e-24 115.2 234 35.0
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 7.4e-22 108.6 101 66.3
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.0e-10 71.6 51 74.5
Actinidia13116 Actinidia chinensis HOM05D000001 ORTHO05D009676 2.0e-06 57.4 47 61.7


User provided reference genes

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