Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 1.4e-31 139.0 73 100.0
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 2.7e-30 134.8 73 97.3
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 5.9e-30 133.7 73 95.9
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 4.4e-25 117.5 73 79.5
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 5.7e-25 117.1 67 86.6
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 7.5e-25 116.7 73 79.5
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 6.3e-24 113.6 67 82.1
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 5.4e-23 110.5 73 75.3
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 1.2e-22 109.4 68 77.9
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 2.7e-22 108.2 73 74.0
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 4.5e-22 107.5 73 71.2
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 4.5e-22 107.5 73 69.9
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 7.7e-22 106.7 67 77.6
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.0e-21 106.3 70 72.9
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 1.7e-21 105.5 73 72.6
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 2.3e-21 105.1 69 69.6
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 2.9e-21 104.8 73 69.9
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 3.8e-21 104.4 70 70.0
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 8.6e-21 103.2 68 72.1
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 8.6e-21 103.2 68 72.1
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 8.6e-21 103.2 69 68.1
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 1.1e-20 102.8 67 73.1
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 1.1e-20 102.8 73 69.9
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 1.9e-20 102.1 71 73.2
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.9e-20 102.1 67 71.6
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.9e-20 102.1 69 66.7
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 2.5e-20 101.7 67 71.6
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 2.5e-20 101.7 70 72.9
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.5e-20 101.7 69 68.1
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 2.5e-20 101.7 70 71.4
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 2.5e-20 101.7 70 70.0
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 5.5e-20 100.5 70 70.0
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 5.5e-20 100.5 70 72.9
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 5.5e-20 100.5 70 70.0
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 1.2e-19 99.4 71 71.8
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 2.1e-19 98.6 70 68.6
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 2.8e-19 98.2 64 73.4
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 4.7e-19 97.4 64 73.4
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 4.7e-19 97.4 70 68.6
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 4.7e-19 97.4 73 67.1
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 4.7e-19 97.4 73 61.6
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 6.1e-19 97.1 70 65.7
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 1.4e-18 95.9 70 67.1
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 1.8e-18 95.5 67 65.7
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 1.8e-18 95.5 70 65.7
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 1.8e-18 95.5 65 69.2
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 2.3e-18 95.1 73 65.8
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 2.3e-18 95.1 67 70.1
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 3.0e-18 94.7 70 65.7
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 3.0e-18 94.7 64 67.2
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 4.0e-18 94.4 70 67.1
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 4.0e-18 94.4 70 67.1
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 4.0e-18 94.4 64 68.8
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 4.0e-18 94.4 70 65.7
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 4.0e-18 94.4 69 65.2
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 5.2e-18 94.0 64 68.8
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 5.2e-18 94.0 70 67.1
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 8.9e-18 93.2 65 67.7
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 2.0e-17 92.0 73 64.4
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.0e-17 92.0 73 64.4
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.0e-17 92.0 73 64.4
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.0e-17 92.0 73 64.4
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.6e-17 91.7 72 63.9
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 3.4e-17 91.3 65 69.2
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 3.4e-17 91.3 65 69.2
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 3.4e-17 91.3 65 69.2
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 3.4e-17 91.3 65 69.2
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 5.7e-17 90.5 64 65.6
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 5.7e-17 90.5 65 64.6
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 5.7e-17 90.5 73 63.0
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 7.5e-17 90.1 65 64.6
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 9.8e-17 89.7 64 64.1
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 1.3e-16 89.4 69 63.8
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 1.7e-16 89.0 65 64.6
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 2.2e-16 88.6 65 64.6
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.8e-16 88.2 65 63.1
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 4.9e-16 87.4 70 60.0
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 6.3e-16 87.0 65 61.5
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 8.3e-16 86.7 65 64.6
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 8.3e-16 86.7 71 63.4
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 1.1e-15 86.3 74 59.5
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.4e-15 85.9 64 60.9
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 7.0e-15 83.6 86 53.5
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 9.2e-15 83.2 70 60.0
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 1.6e-14 82.4 45 86.7
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 3.5e-14 81.3 185 36.2
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 7.8e-14 80.1 72 58.3
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 2.9e-13 78.2 44 79.5
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 1.9e-12 75.5 47 78.7
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 5.6e-12 73.9 70 51.4
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 3.6e-11 71.2 69 52.2
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 3.1e-10 68.2 47 72.3
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 5.2e-10 67.4 67 52.2
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 2.6e-09 65.1 67 47.8
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 7.5e-09 63.5 65 44.6
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 1.7e-08 62.4 65 44.6
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 1.7e-08 62.4 68 45.6
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 2.9e-08 61.6 46 65.2
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 3.7e-08 61.2 42 71.4
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 4.9e-08 60.8 47 70.2
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 1.4e-07 59.3 40 70.0
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 2.7e-06 55.1 52 53.8
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 4.6e-06 54.3 41 61.0
Dinv03021 Davidia involucrata HOM05D007530 ORTHO05D009556 6.0e-06 53.9 41 58.5
Hma1.2p1_0024F.1_g016010 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 6.0e-06 53.9 46 58.7


User provided reference genes

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