Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g084080.3 Solanum lycopersicum HOM05D023770 ORTHO05D024770 2.9e-70 270.4 128 100.0
CAN.G1169.10 Capsicum annuum HOM05D023770 ORTHO05D024770 3.0e-35 154.1 114 69.3
Nitab4.5_0001297g0090 Nicotiana tabacum HOM05D004255 ORTHO05D004815 5.5e-13 80.1 86 47.7
Sopen10g033530 Solanum pennellii HOM05D023770 ORTHO05D024770 1.6e-12 78.6 35 100.0
PGSC0003DMG402010456 Solanum tuberosum HOM05D023770 ORTHO05D024770 7.9e-12 76.3 35 97.1
Glyma.19G000100 Glycine max HOM05D004255 ORTHO05D004815 3.9e-11 73.9 122 36.1
Lsat_1_v5_gn_2_99540 Lactuca sativa HOM05D004255 ORTHO05D004815 5.1e-11 73.6 108 33.3
Phvul.007G232500 Phaseolus vulgaris HOM05D004255 ORTHO05D004815 5.7e-10 70.1 122 36.1
QL09p049934 Quercus lobata HOM05D004255 ORTHO05D004815 5.7e-10 70.1 110 34.5
VMungo0720G0391 Vigna mungo HOM05D004255 ORTHO05D004815 9.7e-10 69.3 114 35.1
AT2G28050 Arabidopsis thaliana HOM05D004255 ORTHO05D004815 8.2e-09 66.2 101 36.6
Ah.08g211800 Amaranthus hybridus HOM05D004255 ORTHO05D004815 1.1e-08 65.9 107 37.4
BcaC02g10932 Brassica carinata HOM05D004255 ORTHO05D004815 6.9e-08 63.2 107 30.8
C04p23520 Brassica napus HOM05D004255 ORTHO05D004815 6.9e-08 63.2 107 30.8
RcHm_v2.0_Chr5g0058011 Rosa chinensis HOM05D004255 ORTHO05D004815 1.2e-07 62.4 92 33.7
Eucgr.K03591 Eucalyptus grandis HOM05D004255 ORTHO05D004815 1.5e-07 62.0 81 40.7
Lalb_Chr11g0073041 Lupinus albus HOM05D004255 ORTHO05D004815 2.0e-07 61.6 83 43.4
Medtr1g045880 Medicago truncatula HOM05D004255 ORTHO05D004815 2.6e-07 61.2 85 44.7
Ca_11878_v3 Cicer arietinum L. HOM05D004255 ORTHO05D004815 3.4e-07 60.8 84 42.9
TPR.G23963 Trifolium pratense HOM05D004255 ORTHO05D004815 5.9e-07 60.1 83 42.2
Nitab4.5_0005518g0020 Nicotiana tabacum HOM05D004255 ORTHO05D004815 1.0e-06 59.3 39 64.1
AL4G22170 Arabidopsis lyrata HOM05D004255 ORTHO05D004815 1.7e-06 58.5 85 37.6
ECA238G3169 Erigeron canadensis HOM05D004255 ORTHO05D004815 1.7e-06 58.5 67 43.3
Lj4g0021155 Lotus japonicus HOM05D004255 ORTHO05D004815 1.7e-06 58.5 110 35.5
PGSC0003DMG401010456 Solanum tuberosum HOM05D004255 ORTHO05D004815 1.7e-06 58.5 48 62.5
Carub.0004s0880 Capsella rubella HOM05D004255 ORTHO05D004815 2.2e-06 58.2 80 38.8
Solyc10g084090.3 Solanum lycopersicum HOM05D004255 ORTHO05D004815 2.2e-06 58.2 39 69.2
CARHR120730 Cardamine hirsuta HOM05D004255 ORTHO05D004815 3.8e-06 57.4 82 36.6
Thhalv10016624m.g Eutrema salsugineum HOM05D004255 ORTHO05D004815 5.0e-06 57.0 81 35.8
MELO3C009348.2 Cucumis melo HOM05D004255 ORTHO05D004815 6.5e-06 56.6 101 37.6
CsaV3_3G035890 Cucumis sativus L. HOM05D004255 ORTHO05D004815 6.5e-06 56.6 96 39.6
Peaxi162Scf00311g00013 Petunia axillaris HOM05D004255 ORTHO05D004815 6.5e-06 56.6 38 68.4
PGR083G1347 Punica granatum HOM05D004255 ORTHO05D004815 6.5e-06 56.6 89 38.2
Sopen10g033550 Solanum pennellii HOM05D004255 ORTHO05D004815 6.5e-06 56.6 38 68.4
CAN.G774.31 Capsicum annuum HOM05D023770 ORTHO05D024770 8.5e-06 56.2 35 77.1
Sopen10g033540 Solanum pennellii HOM05D004255 ORTHO05D004815 8.5e-06 56.2 39 64.1


User provided reference genes

Program Settings