Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc10g083380.2 Solanum lycopersicum HOM05D005512 ORTHO05D006716 3.5e-161 571.6 300 100.0
Sopen10g032880 Solanum pennellii HOM05D005512 ORTHO05D006716 2.7e-81 306.2 174 93.7
PGSC0003DMG400028166 Solanum tuberosum HOM05D005512 ORTHO05D006716 2.4e-61 240.0 329 50.2
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 9.2e-29 131.7 204 48.5
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 2.4e-24 117.1 173 51.4
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 2.4e-24 117.1 173 51.4
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 6.9e-24 115.5 153 58.2
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 4.9e-22 109.4 178 44.4
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 3.2e-21 106.7 175 46.9
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 6.0e-20 102.4 180 42.2
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.7e-19 100.9 181 46.4
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 8.7e-19 98.6 228 39.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 8.7e-19 98.6 175 39.4
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 8.7e-19 98.6 179 41.3
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 1.9e-18 97.4 182 43.4
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 7.3e-18 95.5 187 40.1
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 9.6e-18 95.1 175 40.6
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.3e-17 94.7 174 40.2
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 2.1e-17 94.0 183 39.3
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.1e-17 94.0 174 38.5
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 2.1e-17 94.0 179 40.2
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.1e-17 94.0 183 42.1
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 8.1e-17 92.0 183 38.8
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 8.1e-17 92.0 171 43.3
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 8.1e-17 92.0 175 40.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.1e-17 92.0 175 39.4
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 8.1e-17 92.0 175 40.0
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 8.1e-17 92.0 177 42.4
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 8.1e-17 92.0 182 42.3
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 1.8e-16 90.9 183 38.3
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.8e-16 90.9 175 39.4
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 2.4e-16 90.5 192 38.5
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 2.4e-16 90.5 176 38.1
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 5.3e-16 89.4 171 41.5
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 9.0e-16 88.6 174 39.7
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 1.5e-15 87.8 186 41.4
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 2.6e-15 87.0 180 41.1
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 2.6e-15 87.0 174 39.7
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 3.4e-15 86.7 201 36.8
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.5e-15 86.3 178 38.8
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-14 84.7 170 38.8
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 1.3e-14 84.7 183 38.8
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.7e-14 84.3 186 37.6
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 2.2e-14 84.0 104 50.0
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 2.9e-14 83.6 172 40.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 4.9e-14 82.8 177 39.0
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 4.9e-14 82.8 175 38.9
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 4.9e-14 82.8 185 37.8
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 6.4e-14 82.4 171 39.2
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 8.4e-14 82.0 183 37.2
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 1.4e-13 81.3 96 51.0
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.4e-13 81.3 172 41.3
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.9e-13 80.9 206 33.0
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 2.4e-13 80.5 174 39.7
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 3.2e-13 80.1 170 38.8
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 3.2e-13 80.1 174 39.1
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 4.2e-13 79.7 174 36.8
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 4.2e-13 79.7 170 35.9
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 5.4e-13 79.3 177 37.3
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 5.4e-13 79.3 186 36.0
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 7.1e-13 79.0 174 36.8
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 9.3e-13 78.6 178 39.9
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 9.3e-13 78.6 180 35.0
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 9.3e-13 78.6 116 46.6
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.2e-12 78.2 143 42.7
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 1.6e-12 77.8 110 47.3
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 1.6e-12 77.8 99 53.5
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.1e-12 77.4 215 32.6
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 2.1e-12 77.4 174 37.9
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 3.5e-12 76.6 173 38.2
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 3.5e-12 76.6 177 37.9
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 6.0e-12 75.9 175 36.6
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 7.9e-12 75.5 175 37.1
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 7.9e-12 75.5 186 33.9
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.3e-11 74.7 174 36.8
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 1.8e-11 74.3 173 38.2
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.3e-11 73.9 174 36.8
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 3.9e-11 73.2 182 36.8
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 3.9e-11 73.2 172 39.0
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 3.9e-11 73.2 192 35.9
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.5e-10 71.2 170 35.3
DCAR_020766 Daucus carota HOM05D005512 ORTHO05D006716 1.9e-10 70.9 95 51.6
PGSC0003DMG402008883 Solanum tuberosum HOM05D005512 ORTHO05D006716 3.3e-10 70.1 163 36.8
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 4.3e-10 69.7 174 35.6
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 4.3e-10 69.7 160 37.5
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 5.6e-10 69.3 120 43.3
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 9.6e-10 68.6 69 55.1
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 1.6e-09 67.8 161 38.5
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 2.8e-09 67.0 119 37.8
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 3.6e-09 66.6 100 43.0
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.1e-08 65.1 172 34.9
Zm00001eb197160 Zea mays HOM05D005512 ORTHO05D006716 5.3e-08 62.8 66 54.5
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 6.9e-08 62.4 179 34.6
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 1.2e-07 61.6 82 45.1
Os11g0154900 Oryza sativa ssp. japonica HOM05D005512 ORTHO05D006716 3.4e-07 60.1 117 41.0
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 3.4e-07 60.1 171 33.3
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 7.6e-07 58.9 113 38.9
HPP92_009043 Vanilla planifolia HOM05D005512 ORTHO05D006716 7.6e-07 58.9 68 48.5
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 2.2e-06 57.4 87 43.7
Medtr7g104190 Medicago truncatula HOM05D005512 ORTHO05D006716 3.8e-06 56.6 147 34.7
Glyma.17G197300 Glycine max HOM05D005512 ORTHO05D006716 4.9e-06 56.2 89 44.9
CDE06G1506 Ceratophyllum demersum HOM05D000077 ORTHO05D002348 6.4e-06 55.8 105 41.9
Glyma.19G084800 Glycine max HOM05D005512 ORTHO05D006716 8.4e-06 55.5 89 44.9


User provided reference genes

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